RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 VDAC1P21796 283 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 HERPUD1Q15011 391 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 MSMO1Q15800 293 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 KRTAP24-1Q3LI83 254 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 DHRS11Q6UWP2 260 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 GLDNQ6ZMI3 551 aaPredicted RBP8.6□□□□□ -1.03
TPM1-229ENST00000561242 OVCH2Q7RTZ1 564 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 C5orf24Q7Z6I8 188 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 GDPD1Q8N9F7 314 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 BVESQ8NE79 360 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 OR4X2Q8NGF9 303 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 SMIM4Q8WVI0 70 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 ST6GALNAC6Q969X2 333 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 HARBI1Q96MB7 349 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 ABHD1Q96SE0 405 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 TOLLIPQ9H0E2 274 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 KCNIP3Q9Y2W7 256 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 CSMD2Q7Z408 3487 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 IGKV1D-8A0A087WSZ0 117 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 TEX13DA0A0J9YY54 714 aaPredicted RBP8.59□□□□□ -1.03
TPM1-229ENST00000561242 M0QYG6 137 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 TNFSF12O43508 249 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 GSTZ1O43708 216 aaPredicted RBP8.59□□□□□ -1.03
TPM1-229ENST00000561242 CD3DP04234 171 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 SERPINE2P07093 398 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 CT45A6P0DMU7 189 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 CT45A5P0DMU8 189 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 CT45A7P0DMV0 189 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 DIAPH2-AS1Q14236 149 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 AWAT1Q58HT5 328 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 KHDC1LQ5JSQ8 128 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 VAX1Q5SQQ9 334 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 FAM53AQ6NSI3 398 aaPredicted RBP8.59□□□□□ -1.03
TPM1-229ENST00000561242 TMEM65Q6PI78 240 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 SHISA2Q6UWI4 295 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 MFSD4AQ8N468 514 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 DMBX1Q8NFW5 382 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 OSR1Q8TAX0 266 aaPredicted RBP8.59□□□□□ -1.03
TPM1-229ENST00000561242 PHB2Q99623 299 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 NXF2Q9GZY0 626 aaKnown RBP8.59□□□□□ -1.03
TPM1-229ENST00000561242 RBM38Q9H0Z9 239 aaKnown RBP8.59□□□□□ -1.03
TPM1-229ENST00000561242 MIXL1Q9H2W2 232 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 CCL28Q9NRJ3 127 aa8.59□□□□□ -1.03
TPM1-229ENST00000561242 LIN7CQ9NUP9 197 aaKnown RBP8.59□□□□□ -1.03
TPM1-229ENST00000561242 METTL1Q9UBP6 276 aaKnown RBP8.59□□□□□ -1.03
TPM1-229ENST00000561242 FLNAP21333 2647 aaKnown RBP8.59□□□□□ -1.03
TPM1-229ENST00000561242 FAM90A9PA6NNJ1 464 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 H0YJW9 148 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 AP4M1O00189 453 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 CYB5BO43169 146 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 RBMXL2O75526 392 aaKnown RBP8.58□□□□□ -1.04
TPM1-229ENST00000561242 TSPAN9O75954 239 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 SNAPC5O75971 98 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 SPDEFO95238 335 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 CRYZL1O95825 349 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 OPN1MWP04001 364 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 OPN1MW2P0DN77 364 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 OPN1MW3P0DN78 364 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 ANXA3P12429 323 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 GNB1P62873 340 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 DGCR2P98153 550 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 OR2B11Q5JQS5 317 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 MRPL41Q8IXM3 137 aaKnown RBP8.58□□□□□ -1.04
TPM1-229ENST00000561242 SPAG16Q8N0X2 631 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 TCTEX1D1Q8N7M0 179 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 OR5AN1Q8NGI8 311 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 OR6Q1Q8NGQ2 317 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 OR51H1Q8NH63 302 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 TERB2Q8NHR7 220 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 SPATA3Q8NHX4 192 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 CHPT1Q8WUD6 406 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 DEDD2Q8WXF8 326 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 SNAPC3Q92966 411 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 MOB3AQ96BX8 217 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 ZNF486Q96H40 463 aaPredicted RBP8.58□□□□□ -1.04
TPM1-229ENST00000561242 CLCC1Q96S66 551 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 AGMATQ9BSE5 352 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 WDR12Q9GZL7 423 aaKnown RBP8.58□□□□□ -1.04
TPM1-229ENST00000561242 C16orf95Q9H693 158 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 HRASLSQ9HDD0 168 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 ACANP16112 2415 aa8.58□□□□□ -1.04
TPM1-229ENST00000561242 CSMD1Q96PZ7 3565 aa8.57□□□□□ -1.04
TPM1-229ENST00000561242 NAP1L6A6NFF2 107 aa8.57□□□□□ -1.04
TPM1-229ENST00000561242 RRHO14718 337 aa8.57□□□□□ -1.04
TPM1-229ENST00000561242 B3GALNT1O75752 331 aa8.57□□□□□ -1.04
TPM1-229ENST00000561242 MDKP21741 143 aaPredicted RBP8.57□□□□□ -1.04
TPM1-229ENST00000561242 DUTP33316 252 aaKnown RBP8.57□□□□□ -1.04
TPM1-229ENST00000561242 EBI3Q14213 229 aa8.57□□□□□ -1.04
TPM1-229ENST00000561242 TRIM16LQ309B1 348 aa8.57□□□□□ -1.04
TPM1-229ENST00000561242 PHLDA2Q53GA4 152 aa8.57□□□□□ -1.04
TPM1-229ENST00000561242 Q6ZSV7 163 aa8.57□□□□□ -1.04
TPM1-229ENST00000561242 LYSMD2Q8IV50 215 aa8.57□□□□□ -1.04
TPM1-229ENST00000561242 CFHR4Q92496 578 aa8.57□□□□□ -1.04
TPM1-229ENST00000561242 ZNF355PQ9NSJ1 428 aa8.57□□□□□ -1.04
TPM1-229ENST00000561242 PTTG2Q9NZH5 202 aa8.57□□□□□ -1.04
TPM1-229ENST00000561242 MMP24Q9Y5R2 645 aa8.57□□□□□ -1.04
TPM1-229ENST00000561242 HIVEP1P15822 2718 aa8.57□□□□□ -1.04
TPM1-229ENST00000561242 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.56□□□□□ -1.04
TPM1-229ENST00000561242 LINC00854A0A1B0GVQ3 168 aa8.56□□□□□ -1.04
TPM1-229ENST00000561242 PSMB11A5LHX3 300 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms