RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 RPL12P30050 165 aaKnown RBP14.03□□□□□ -0.16
HDDC3-206ENST00000561036 GNG10P50151 68 aa14.03□□□□□ -0.16
HDDC3-206ENST00000561036 TAGLNQ01995 201 aaKnown RBP14.03□□□□□ -0.16
HDDC3-206ENST00000561036 ZNF816Q0VGE8 651 aaPredicted RBP14.03□□□□□ -0.16
HDDC3-206ENST00000561036 CXorf66Q5JRM2 361 aaPredicted RBP14.03□□□□□ -0.16
HDDC3-206ENST00000561036 ZNF833PQ6ZTB9 187 aa14.03□□□□□ -0.16
HDDC3-206ENST00000561036 DMBX1Q8NFW5 382 aa14.03□□□□□ -0.16
HDDC3-206ENST00000561036 TNFRSF14Q92956 283 aa14.03□□□□□ -0.16
HDDC3-206ENST00000561036 CACNG5Q9UF02 275 aa14.03□□□□□ -0.16
HDDC3-206ENST00000561036 UBQLN2Q9UHD9 624 aa14.03□□□□□ -0.16
HDDC3-206ENST00000561036 RCL1Q9Y2P8 373 aaKnown RBP14.03□□□□□ -0.16
HDDC3-206ENST00000561036 PPIAL4CA0A0B4J2A2 164 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 A0A1W2PPE3 182 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 FAM90A9PA6NNJ1 464 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 J3QR06 171 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 GPR137BO60478 399 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 S1PR2O95136 353 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 LIPFP07098 398 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 PPIAL4GP0DN37 164 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 EPHA1P21709 976 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 GNB2P62879 340 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 EXOSC2Q13868 293 aaKnown RBP14.02□□□□□ -0.17
HDDC3-206ENST00000561036 OR2B11Q5JQS5 317 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 Q6ZRM9 215 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 C11orf42Q8N5U0 333 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 OR4S2Q8NH73 311 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 OR9G1Q8NH87 305 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 TMEM133Q9H2Q1 129 aa14.02□□□□□ -0.17
HDDC3-206ENST00000561036 MSGN1A6NI15 193 aa14.01□□□□□ -0.17
HDDC3-206ENST00000561036 KIAA1324LA8MWY0 1029 aaPredicted RBP14.01□□□□□ -0.17
HDDC3-206ENST00000561036 WRBO00258 174 aa14.01□□□□□ -0.17
HDDC3-206ENST00000561036 TOR1AO14656 332 aa14.01□□□□□ -0.17
HDDC3-206ENST00000561036 FCGR3BO75015 233 aa14.01□□□□□ -0.17
HDDC3-206ENST00000561036 CFDP00746 253 aaPredicted RBP14.01□□□□□ -0.17
HDDC3-206ENST00000561036 KRASP01116 189 aa14.01□□□□□ -0.17
HDDC3-206ENST00000561036 ZNF137PP52743 207 aa14.01□□□□□ -0.17
HDDC3-206ENST00000561036 POLR2GP62487 172 aaKnown RBP eCLIP14.01□□□□□ -0.17
HDDC3-206ENST00000561036 VAMP2P63027 116 aa14.01□□□□□ -0.17
HDDC3-206ENST00000561036 DHRS7BQ6IAN0 325 aaPredicted RBP14.01□□□□□ -0.17
HDDC3-206ENST00000561036 H2BFWTQ7Z2G1 175 aa14.01□□□□□ -0.17
HDDC3-206ENST00000561036 STOML3Q8TAV4 291 aa14.01□□□□□ -0.17
HDDC3-206ENST00000561036 TMEM186Q96B77 213 aa14.01□□□□□ -0.17
HDDC3-206ENST00000561036 RAB40CQ96S21 281 aa14.01□□□□□ -0.17
HDDC3-206ENST00000561036 ZC4H2Q9NQZ6 224 aa14.01□□□□□ -0.17
HDDC3-206ENST00000561036 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.01□□□□□ -0.17
HDDC3-206ENST00000561036 CACFD1Q9UGQ2 172 aa14.01□□□□□ -0.17
HDDC3-206ENST00000561036 RELNP78509 3460 aa14□□□□□ -0.17
HDDC3-206ENST00000561036 KCNAB3O43448 404 aa14□□□□□ -0.17
HDDC3-206ENST00000561036 NDUFS7O75251 213 aa14□□□□□ -0.17
HDDC3-206ENST00000561036 RRASP10301 218 aa14□□□□□ -0.17
HDDC3-206ENST00000561036 IL3RAP26951 378 aa14□□□□□ -0.17
HDDC3-206ENST00000561036 G6PCP35575 357 aa14□□□□□ -0.17
HDDC3-206ENST00000561036 EIF5AP63241 154 aaKnown RBP14□□□□□ -0.17
HDDC3-206ENST00000561036 SRSF1Q07955 248 aaKnown RBP eCLIP14□□□□□ -0.17
HDDC3-206ENST00000561036 C1orf229Q6ZS94 237 aaPredicted RBP14□□□□□ -0.17
HDDC3-206ENST00000561036 ABHD12Q8N2K0 398 aa14□□□□□ -0.17
HDDC3-206ENST00000561036 ZNF383Q8NA42 475 aa14□□□□□ -0.17
HDDC3-206ENST00000561036 OR10X1Q8NGY0 326 aa14□□□□□ -0.17
HDDC3-206ENST00000561036 ST8SIA2Q92186 375 aa14□□□□□ -0.17
HDDC3-206ENST00000561036 R3HDM4Q96D70 268 aa14□□□□□ -0.17
HDDC3-206ENST00000561036 PHYHIPLQ96FC7 376 aa14□□□□□ -0.17
HDDC3-206ENST00000561036 SSBP3Q9BWW4 388 aaPredicted RBP14□□□□□ -0.17
HDDC3-206ENST00000561036 ZNF471Q9BX82 626 aaPredicted RBP14□□□□□ -0.17
HDDC3-206ENST00000561036 SLC25A31Q9H0C2 315 aa14□□□□□ -0.17
HDDC3-206ENST00000561036 DOPEY1Q5JWR5 2465 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 LOC105371242A0A075B767 164 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 MARCH11A6NNE9 402 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 M0R1W7 72 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 SSSCA1O60232 199 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 MED6O75586 246 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 COX6B1P14854 86 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 NQO2P16083 231 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 PDLIM4P50479 330 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 PRRX1P54821 245 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 LINC00205P59089 165 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 TAS2R30P59541 319 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 ERVFRD-1P60508 538 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 ERVK-16P61578 105 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 RTL8BQ17RB0 113 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 MIDNQ504T8 468 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 OR2C3Q8N628 320 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 SCARB1Q8WTV0 552 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 CCL19Q99731 98 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 AIFM2Q9BRQ8 373 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 CYTL1Q9NRR1 136 aa13.99□□□□□ -0.17
HDDC3-206ENST00000561036 C22orf46C9J442 243 aa13.98□□□□□ -0.17
HDDC3-206ENST00000561036 SYNGR2O43760 224 aa13.98□□□□□ -0.17
HDDC3-206ENST00000561036 CHST1O43916 411 aa13.98□□□□□ -0.17
HDDC3-206ENST00000561036 GAPDHP04406 335 aaKnown RBP13.98□□□□□ -0.17
HDDC3-206ENST00000561036 CT45A6P0DMU7 189 aa13.98□□□□□ -0.17
HDDC3-206ENST00000561036 CT45A5P0DMU8 189 aa13.98□□□□□ -0.17
HDDC3-206ENST00000561036 CT45A7P0DMV0 189 aa13.98□□□□□ -0.17
HDDC3-206ENST00000561036 TPT1P13693 172 aaKnown RBP13.98□□□□□ -0.17
HDDC3-206ENST00000561036 RPL23AP62750 156 aaKnown RBP13.98□□□□□ -0.17
HDDC3-206ENST00000561036 POU2AF1Q16633 256 aa13.98□□□□□ -0.17
HDDC3-206ENST00000561036 IZUMO4Q1ZYL8 232 aa13.98□□□□□ -0.17
HDDC3-206ENST00000561036 AARDQ4LEZ3 155 aa13.98□□□□□ -0.17
HDDC3-206ENST00000561036 C1orf122Q6ZSJ8 110 aa13.98□□□□□ -0.17
HDDC3-206ENST00000561036 MAGT1Q9H0U3 335 aa13.98□□□□□ -0.17
HDDC3-206ENST00000561036 BARX1Q9HBU1 254 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms