RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 HMGB3O15347 200 aaKnown RBP12.16□□□□□ -0.46
CRTC3-210ENST00000560927 CXCL1P09341 107 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 ERVFRD-1P60508 538 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 ACSM6Q6P461 480 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 H2BFWTQ7Z2G1 175 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 SLC35E3Q7Z769 313 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 CA5BP1Q8WTZ4 195 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 MAP1LC3BQ9GZQ8 125 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 MBD3L4A6NDZ8 208 aaPredicted RBP12.16□□□□□ -0.46
CRTC3-210ENST00000560927 MBD3L3A6NE82 208 aaPredicted RBP12.16□□□□□ -0.46
CRTC3-210ENST00000560927 MBD3L5A6NJ08 208 aaPredicted RBP12.16□□□□□ -0.46
CRTC3-210ENST00000560927 ZNF891A8MT65 544 aaPredicted RBP12.16□□□□□ -0.46
CRTC3-210ENST00000560927 RBMXL2O75526 392 aaKnown RBP12.16□□□□□ -0.46
CRTC3-210ENST00000560927 CEACAM4O75871 244 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 IGHV3-13P01766 116 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 IGHV3-7P01780 117 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 IGHV2-5P01817 119 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 NQO2P16083 231 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 TLE1Q04724 770 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 ELOBQ15370 118 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 NCR3LG1Q68D85 454 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 OR10G4Q8NGN3 311 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 MBD3L2Q8NHZ7 208 aaPredicted RBP12.16□□□□□ -0.46
CRTC3-210ENST00000560927 MGAQ8IWI9 3026 aa12.15□□□□□ -0.46
CRTC3-210ENST00000560927 MARCH11A6NNE9 402 aa12.15□□□□□ -0.46
CRTC3-210ENST00000560927 SRRM5B3KS81 715 aa12.15□□□□□ -0.46
CRTC3-210ENST00000560927 RAB29O14966 203 aa12.15□□□□□ -0.46
CRTC3-210ENST00000560927 SPINT2O43291 252 aa12.15□□□□□ -0.46
CRTC3-210ENST00000560927 RPS10P46783 165 aaKnown RBP12.15□□□□□ -0.46
CRTC3-210ENST00000560927 ZNF474Q6S9Z5 364 aaPredicted RBP12.15□□□□□ -0.46
CRTC3-210ENST00000560927 ZNF66Q6ZN08 573 aa12.15□□□□□ -0.46
CRTC3-210ENST00000560927 GCSAMQ8N6F7 178 aa12.15□□□□□ -0.46
CRTC3-210ENST00000560927 S100PBPQ96BU1 408 aa12.15□□□□□ -0.46
CRTC3-210ENST00000560927 PTPRBP23467 1997 aa12.15□□□□□ -0.46
CRTC3-210ENST00000560927 M0R1B8 84 aa12.15□□□□□ -0.46
CRTC3-210ENST00000560927 HTD2P86397 168 aa12.15□□□□□ -0.46
CRTC3-210ENST00000560927 TFF3Q07654 80 aa12.15□□□□□ -0.46
CRTC3-210ENST00000560927 ZNRF1Q8ND25 227 aa12.15□□□□□ -0.46
CRTC3-210ENST00000560927 PINX1Q96BK5 328 aaKnown RBP12.15□□□□□ -0.46
CRTC3-210ENST00000560927 CEBPZOSA8MTT3 80 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 UTF1Q5T230 341 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 VHLLQ6RSH7 139 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 ZADH2Q8N4Q0 377 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 LHX4Q969G2 390 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 OR2V2Q96R30 315 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 HSD17B10Q99714 261 aaKnown RBP12.14□□□□□ -0.47
CRTC3-210ENST00000560927 TMPRSS5Q9H3S3 457 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 METTL1Q9UBP6 276 aaKnown RBP12.14□□□□□ -0.47
CRTC3-210ENST00000560927 FAM215AQ9Y5M1 114 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 TGIF2-C20orf24A0A0A6YYL0 155 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 ADH4P08319 380 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 OR9G9P0C7N8 305 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 FGF7P21781 194 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 PAX5Q02548 391 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 CENPVQ7Z7K6 275 aaPredicted RBP12.14□□□□□ -0.47
CRTC3-210ENST00000560927 C1QL4Q86Z23 238 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 TMEM147Q9BVK8 224 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 QTRT1Q9BXR0 403 aaKnown RBP12.14□□□□□ -0.47
CRTC3-210ENST00000560927 FAM234AQ9H0X4 552 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 SLC25A22Q9H936 323 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 SLC39A9Q9NUM3 307 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 GNG12Q9UBI6 72 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 TIMM9Q9Y5J7 89 aa12.14□□□□□ -0.47
CRTC3-210ENST00000560927 DUTP33316 252 aaKnown RBP12.13□□□□□ -0.47
CRTC3-210ENST00000560927 GPR12P47775 334 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 MORN2Q502X0 79 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 SLC16A13Q7RTY0 426 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 MRGPRGQ86SM5 289 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 MOGAT3Q86VF5 341 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 OR10P1Q8NGE3 313 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 VAX2Q9UIW0 290 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 FCGR3BO75015 233 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 IFNA17P01571 189 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 DEFA4P12838 97 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 ZNF134P52741 427 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 FAM201AQ5SY85 155 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 SSX9Q7RTT3 188 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 TCTEX1D1Q8N7M0 179 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 FAM169BQ8N8A8 192 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 Q8TCH9 128 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 R3HDM4Q96D70 268 aa12.13□□□□□ -0.47
CRTC3-210ENST00000560927 MRPL37Q9BZE1 423 aaKnown RBP12.13□□□□□ -0.47
CRTC3-210ENST00000560927 SPRY3O43610 288 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 SELLP14151 372 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 RPL39P5Q59GN2 51 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 FAM90A1Q86YD7 464 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 VKORC1L1Q8N0U8 176 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 K7EM74 188 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 AP4M1O00189 453 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 EDDM3BP56851 147 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 CD81P60033 236 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 MZT1Q08AG7 82 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 ATP6V1FQ16864 119 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 TRAT1Q6PIZ9 186 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 IGF2-ASQ6U949 168 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 MEGF10Q96KG7 1140 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 P2RX4Q99571 388 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 NPCDR1Q9BY65 106 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 SIRT7Q9NRC8 400 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 WASF3Q9UPY6 502 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms