RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 TNFSF12O43508 249 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 CCNKO75909 580 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 APOA2P02652 100 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 GAPDHP04406 335 aaKnown RBP5.25□□□□□ -1.57
SPG11-221ENST00000560299 ARG1P05089 322 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 OR5AC1P0C628 307 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 RRASP10301 218 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 HTR1DP28221 377 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 MC5RP33032 325 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 ARHGDIBP52566 201 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 SUPT4H1P63272 117 aaKnown RBP5.25□□□□□ -1.57
SPG11-221ENST00000560299 CYCSP99999 105 aaKnown RBP5.25□□□□□ -1.57
SPG11-221ENST00000560299 TMEM187Q14656 261 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 RTL8BQ17RB0 113 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 HLA-DRB5Q30154 266 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 KRTAP21-3Q3LHN1 58 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 VMO1Q7Z5L0 202 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 PNKDQ8N490 385 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 C11orf42Q8N5U0 333 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 TEX29Q8N6K0 151 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 Q8N7P7 452 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 OR11H6Q8NGC7 330 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 RNASE11Q8TAA1 199 aaKnown RBP5.25□□□□□ -1.57
SPG11-221ENST00000560299 GLYATL2Q8WU03 294 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 IL22RA2Q969J5 263 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 PPP1R14BQ96C90 147 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 Q96MF0 132 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 PCGF1Q9BSM1 259 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 PDCD10Q9BUL8 212 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 TMEM222Q9H0R3 208 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 IFI27L2Q9H2X8 130 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 RAB18Q9NP72 206 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 MGAT4CQ9UBM8 478 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 INSIG2Q9Y5U4 225 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 AUP1Q9Y679 476 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 C2CD3Q4AC94 2353 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 ABCA2Q9BZC7 2435 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 SAA2-SAA4A0A096LPE2 208 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 C5orf51A6NDU8 294 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.24□□□□□ -1.57
SPG11-221ENST00000560299 FAM25EA8MYX2 175 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 OOSP1A8MZH6 123 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 BUB1B-PAK6H3BSN5 160 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 J3QLI3 93 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 GOSR2O14653 212 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 SLC31A2O15432 143 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 RBFOX2O43251 390 aaKnown RBP eCLIP5.24□□□□□ -1.57
SPG11-221ENST00000560299 CD5LO43866 347 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 CDS2O95674 445 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 TGFAP01135 160 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 IGLV1-47P01700 117 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 IGLV2-14P01704 120 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 SAA2P0DJI9 122 aaPredicted RBP5.24□□□□□ -1.57
SPG11-221ENST00000560299 SULT1A3P0DMM9 295 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 SULT1A4P0DMN0 295 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 HLA-GP17693 338 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 VDAC1P21796 283 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 COX7A1P24310 79 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 UCP1P25874 307 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 DUTP33316 252 aaKnown RBP5.24□□□□□ -1.57
SPG11-221ENST00000560299 UBE2E1P51965 193 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 ZNF137PP52743 207 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 ERVK-16P61578 105 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 PAX2Q02962 417 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 PAX8Q06710 450 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 FCN2Q15485 313 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 SP6Q3SY56 376 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 RPL39P5Q59GN2 51 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 MINOS1Q5TGZ0 78 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 TMEM268Q5VZI3 342 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 DHRS7BQ6IAN0 325 aaPredicted RBP5.24□□□□□ -1.57
SPG11-221ENST00000560299 FAM53AQ6NSI3 398 aaPredicted RBP5.24□□□□□ -1.57
SPG11-221ENST00000560299 CCDC144NLQ6NUI1 221 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 GSG1LQ6UXU4 331 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 ZNF833PQ6ZTB9 187 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 TGIF2LXQ8IUE1 241 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 LURAP1LQ8IV03 231 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 FAM219AQ8IW50 185 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 SPAG16Q8N0X2 631 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 LRTM2Q8N967 370 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 OR4S2Q8NH73 311 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 RBPMSQ93062 196 aaKnown RBP5.24□□□□□ -1.57
SPG11-221ENST00000560299 RPEQ96AT9 228 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 RRNAD1Q96FB5 475 aaKnown RBP5.24□□□□□ -1.57
SPG11-221ENST00000560299 TMEM56Q96MV1 263 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 TP53RKQ96S44 253 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 SPIN2AQ99865 258 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 SPIN2BQ9BPZ2 258 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 ZNF436Q9C0F3 470 aaPredicted RBP5.24□□□□□ -1.57
SPG11-221ENST00000560299 SIRPDQ9H106 197 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 C7orf69Q9H7B7 122 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 SIRT7Q9NRC8 400 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 MMP26Q9NRE1 261 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 ZFP57Q9NU63 452 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 HIF1ANQ9NWT6 349 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 COMMD9Q9P000 198 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 DPM3Q9P2X0 92 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 CACFD1Q9UGQ2 172 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 TMED3Q9Y3Q3 217 aa5.24□□□□□ -1.57
SPG11-221ENST00000560299 TBL2Q9Y4P3 447 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms