RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 ETV1P50549 477 aa14.84□□□□□ -0.03
RABGGTA-214ENST00000560163 RPS16P62249 146 aaKnown RBP14.84□□□□□ -0.03
RABGGTA-214ENST00000560163 MED21Q13503 144 aa14.84□□□□□ -0.03
RABGGTA-214ENST00000560163 Q499Y3 187 aa14.84□□□□□ -0.03
RABGGTA-214ENST00000560163 OR2G6Q5TZ20 316 aa14.84□□□□□ -0.03
RABGGTA-214ENST00000560163 C8orf59Q8N0T1 100 aaPredicted RBP14.84□□□□□ -0.03
RABGGTA-214ENST00000560163 ZNF383Q8NA42 475 aa14.84□□□□□ -0.03
RABGGTA-214ENST00000560163 Q96MT0 163 aa14.84□□□□□ -0.03
RABGGTA-214ENST00000560163 CKLFQ9UBR5 152 aa14.84□□□□□ -0.03
RABGGTA-214ENST00000560163 TRBV5-7A0A0A0MS05 114 aa14.83□□□□□ -0.04
RABGGTA-214ENST00000560163 CXorf65A6NEN9 183 aa14.83□□□□□ -0.04
RABGGTA-214ENST00000560163 BMPR1BO00238 502 aa14.83□□□□□ -0.04
RABGGTA-214ENST00000560163 NAPSAO96009 420 aa14.83□□□□□ -0.04
RABGGTA-214ENST00000560163 LALBAP00709 142 aa14.83□□□□□ -0.04
RABGGTA-214ENST00000560163 IGLV2-23P01705 113 aa14.83□□□□□ -0.04
RABGGTA-214ENST00000560163 PMS2P11Q13670 270 aa14.83□□□□□ -0.04
RABGGTA-214ENST00000560163 CEMP1Q6PRD7 247 aaPredicted RBP14.83□□□□□ -0.04
RABGGTA-214ENST00000560163 SVOPQ8N4V2 548 aa14.83□□□□□ -0.04
RABGGTA-214ENST00000560163 FAAP24Q9BTP7 215 aa14.83□□□□□ -0.04
RABGGTA-214ENST00000560163 C11orf54Q9H0W9 315 aaPredicted RBP14.83□□□□□ -0.04
RABGGTA-214ENST00000560163 BABAM2Q9NXR7 383 aa14.83□□□□□ -0.04
RABGGTA-214ENST00000560163 RPL36Q9Y3U8 105 aaKnown RBP14.83□□□□□ -0.04
RABGGTA-214ENST00000560163 VPS13DQ5THJ4 4388 aa14.83□□□□□ -0.04
RABGGTA-214ENST00000560163 KIR2DS2P43631 304 aa14.82□□□□□ -0.04
RABGGTA-214ENST00000560163 PDPNQ86YL7 162 aa14.82□□□□□ -0.04
RABGGTA-214ENST00000560163 LGALS7P47929 136 aa14.81□□□□□ -0.04
RABGGTA-214ENST00000560163 MRGPRG-AS1Q2M3A8 158 aa14.81□□□□□ -0.04
RABGGTA-214ENST00000560163 YIF1BQ5BJH7 314 aa14.81□□□□□ -0.04
RABGGTA-214ENST00000560163 APH1BQ8WW43 257 aa14.81□□□□□ -0.04
RABGGTA-214ENST00000560163 FAM46BQ96A09 425 aa14.81□□□□□ -0.04
RABGGTA-214ENST00000560163 PTX4Q96A99 478 aa14.81□□□□□ -0.04
RABGGTA-214ENST00000560163 PGLYRP3Q96LB9 341 aa14.81□□□□□ -0.04
RABGGTA-214ENST00000560163 CNBD2Q96M20 576 aa14.81□□□□□ -0.04
RABGGTA-214ENST00000560163 A0A0B4J203 849 aa14.8□□□□□ -0.04
RABGGTA-214ENST00000560163 A0A1W2PPK0 400 aa14.8□□□□□ -0.04
RABGGTA-214ENST00000560163 DEDDO75618 318 aa14.8□□□□□ -0.04
RABGGTA-214ENST00000560163 EDN2P20800 178 aa14.8□□□□□ -0.04
RABGGTA-214ENST00000560163 TNFRSF9Q07011 255 aa14.8□□□□□ -0.04
RABGGTA-214ENST00000560163 C6orf201Q7Z4U5 140 aa14.8□□□□□ -0.04
RABGGTA-214ENST00000560163 WFDC3Q8IUB2 231 aa14.8□□□□□ -0.04
RABGGTA-214ENST00000560163 ADAD2Q8NCV1 583 aaKnown RBP14.8□□□□□ -0.04
RABGGTA-214ENST00000560163 COA4Q9NYJ1 87 aa14.8□□□□□ -0.04
RABGGTA-214ENST00000560163 OR1A1Q9P1Q5 309 aa14.8□□□□□ -0.04
RABGGTA-214ENST00000560163 DMRT1Q9Y5R6 373 aa14.8□□□□□ -0.04
RABGGTA-214ENST00000560163 A0A0J9YWU9 116 aa14.79□□□□□ -0.04
RABGGTA-214ENST00000560163 CEACAM6P40199 344 aa14.79□□□□□ -0.04
RABGGTA-214ENST00000560163 GUCA2BQ16661 112 aa14.79□□□□□ -0.04
RABGGTA-214ENST00000560163 TMPRSS11AQ6ZMR5 421 aa14.79□□□□□ -0.04
RABGGTA-214ENST00000560163 EDARADDQ8WWZ3 215 aa14.79□□□□□ -0.04
RABGGTA-214ENST00000560163 WDR89Q96FK6 387 aaPredicted RBP14.79□□□□□ -0.04
RABGGTA-214ENST00000560163 NEDD4LQ96PU5 975 aa14.79□□□□□ -0.04
RABGGTA-214ENST00000560163 GHRLQ9UBU3 117 aa14.79□□□□□ -0.04
RABGGTA-214ENST00000560163 ZNF230Q9UIE0 474 aaPredicted RBP14.79□□□□□ -0.04
RABGGTA-214ENST00000560163 C2orf70A6NJV1 201 aa14.78□□□□□ -0.04
RABGGTA-214ENST00000560163 WBP4O75554 376 aaKnown RBP14.78□□□□□ -0.04
RABGGTA-214ENST00000560163 FOLR2P14207 255 aa14.78□□□□□ -0.04
RABGGTA-214ENST00000560163 GATAD1Q8WUU5 269 aa14.78□□□□□ -0.04
RABGGTA-214ENST00000560163 UQCC2Q9BRT2 126 aa14.78□□□□□ -0.04
RABGGTA-214ENST00000560163 GGTLC1Q9BX51 225 aa14.78□□□□□ -0.04
RABGGTA-214ENST00000560163 YTHDF1Q9BYJ9 559 aaKnown RBP14.78□□□□□ -0.04
RABGGTA-214ENST00000560163 AKIP1Q9NQ31 210 aa14.78□□□□□ -0.04
RABGGTA-214ENST00000560163 TECRQ9NZ01 308 aaKnown RBP14.78□□□□□ -0.04
RABGGTA-214ENST00000560163 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.77□□□□□ -0.05
RABGGTA-214ENST00000560163 TRBV6-6A0A0A6YYG2 114 aa14.77□□□□□ -0.05
RABGGTA-214ENST00000560163 TRBV9A0A0B4J1U6 114 aa14.77□□□□□ -0.05
RABGGTA-214ENST00000560163 MSGN1A6NI15 193 aa14.77□□□□□ -0.05
RABGGTA-214ENST00000560163 APELAP0DMC3 54 aa14.77□□□□□ -0.05
RABGGTA-214ENST00000560163 ZBTB25P24278 435 aa14.77□□□□□ -0.05
RABGGTA-214ENST00000560163 DCKP27707 260 aa14.77□□□□□ -0.05
RABGGTA-214ENST00000560163 HTR2CP28335 458 aa14.77□□□□□ -0.05
RABGGTA-214ENST00000560163 SMN1Q16637 294 aaKnown RBP14.77□□□□□ -0.05
RABGGTA-214ENST00000560163 LGALS9CQ6DKI2 356 aa14.77□□□□□ -0.05
RABGGTA-214ENST00000560163 LAIR2Q6ISS4 152 aa14.77□□□□□ -0.05
RABGGTA-214ENST00000560163 ZNF485Q8NCK3 441 aa14.77□□□□□ -0.05
RABGGTA-214ENST00000560163 DYNLRB2Q8TF09 96 aa14.77□□□□□ -0.05
RABGGTA-214ENST00000560163 PLCXD1Q9NUJ7 323 aa14.77□□□□□ -0.05
RABGGTA-214ENST00000560163 SRRM4A7MD48 611 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 APOA2P02652 100 aa14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 OR9G9P0C7N8 305 aa14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 ATF4P18848 351 aaPredicted RBP14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 RPS27AP62979 156 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 RHOGP84095 191 aa14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 ZNF45Q02386 682 aa14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 OR10K2Q6IF99 312 aa14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 MOB1BQ7L9L4 216 aa14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 KCNG3Q8TAE7 436 aa14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 KCTD12Q96CX2 325 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 DERL3Q96Q80 235 aa14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 SLC35D1Q9NTN3 355 aa14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 CLEC2DQ9UHP7 191 aa14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 KLK5Q9Y337 293 aaPredicted RBP14.76□□□□□ -0.05
RABGGTA-214ENST00000560163 LOC102724200A0A096LPH7 203 aaPredicted RBP14.75□□□□□ -0.05
RABGGTA-214ENST00000560163 FAM223BA6NKX1 122 aa14.75□□□□□ -0.05
RABGGTA-214ENST00000560163 EXOSC2Q13868 293 aaKnown RBP14.75□□□□□ -0.05
RABGGTA-214ENST00000560163 RBM48Q5RL73 367 aaKnown RBP14.75□□□□□ -0.05
RABGGTA-214ENST00000560163 SLC16A13Q7RTY0 426 aa14.75□□□□□ -0.05
RABGGTA-214ENST00000560163 LYG2Q86SG7 212 aa14.75□□□□□ -0.05
RABGGTA-214ENST00000560163 FAM223AQ8IWN6 122 aa14.75□□□□□ -0.05
RABGGTA-214ENST00000560163 NKAIN3Q8N8D7 197 aa14.75□□□□□ -0.05
RABGGTA-214ENST00000560163 ZFP41Q8N8Y5 198 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms