RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 DDB2Q92466 427 aa9.9□□□□□ -0.83
HERC1-205ENST00000559886 ADTRPQ96IZ2 230 aa9.9□□□□□ -0.83
HERC1-205ENST00000559886 LY6LH3BQJ8 138 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 ARG1P05089 322 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 SERPINE2P07093 398 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 CT45A6P0DMU7 189 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 CT45A5P0DMU8 189 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 CT45A7P0DMV0 189 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 THBS3P49746 956 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 DIAPH2-AS1Q14236 149 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 AKAP14Q86UN6 197 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 ZNF383Q8NA42 475 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 C18orf12Q96KH6 178 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 RAB18Q9NP72 206 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 GOSR2O14653 212 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 RAMP3O60896 148 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 CCNKO75909 580 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 IGHV4-31P0DP07 118 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 UBE2E1P51965 193 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 SELENOHQ8IZQ5 122 aaKnown RBP9.89□□□□□ -0.83
HERC1-205ENST00000559886 SPAG16Q8N0X2 631 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 CD300LFQ8TDQ1 290 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 IL22RA2Q969J5 263 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 PRELID3BQ9Y3B1 194 aa9.89□□□□□ -0.83
HERC1-205ENST00000559886 ZANQ9Y493 2812 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 AKAP9Q99996 3911 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 ABCA1O95477 2261 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 ADAP1O75689 374 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 RPA2P15927 270 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 HTR1DP28221 377 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 GZMKP49863 264 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 H2BFSP57053 126 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 CD83Q01151 205 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 OR2B11Q5JQS5 317 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 LDLRAD2Q5SZI1 272 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 TMEM268Q5VZI3 342 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 LYZL2Q7Z4W2 148 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 ZNF695Q8IW36 515 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 PDZD9Q8IXQ8 264 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 OR5M8Q8NGP6 311 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 RBPMSQ93062 196 aaKnown RBP9.88□□□□□ -0.83
HERC1-205ENST00000559886 LHX4Q969G2 390 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 ST6GAL2Q96JF0 529 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 MRPL20Q9BYC9 149 aaKnown RBP9.88□□□□□ -0.83
HERC1-205ENST00000559886 AUP1Q9Y679 476 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 ZNF469Q96JG9 3925 aaPredicted RBP9.88□□□□□ -0.83
HERC1-205ENST00000559886 PIGBOS1A0A0B4J2F0 54 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 A8MV72 311 aaPredicted RBP9.88□□□□□ -0.83
HERC1-205ENST00000559886 RBFOX2O43251 390 aaKnown RBP eCLIP9.88□□□□□ -0.83
HERC1-205ENST00000559886 IGKV1-39P01597 117 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 IGKV1D-39P04432 117 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 HOXB5P09067 269 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 KIR2DS2P43631 304 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 REG1BP48304 166 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 TGIF2LXQ8IUE1 241 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 SLC35G3Q8N808 338 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 ZNF436Q9C0F3 470 aaPredicted RBP9.88□□□□□ -0.83
HERC1-205ENST00000559886 C7orf69Q9H7B7 122 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 DPM3Q9P2X0 92 aa9.88□□□□□ -0.83
HERC1-205ENST00000559886 SVEP1Q4LDE5 3571 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 DUXBA0A1W2PPF3 345 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 LEUTXA8MZ59 168 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 CCSO14618 274 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 FCGR3BO75015 233 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 OR2A4O95047 310 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 SIX6O95475 246 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 TGFAP01135 160 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 LPAR6P43657 344 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 CD300CQ08708 224 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 ZNF816Q0VGE8 651 aaPredicted RBP9.87□□□□□ -0.83
HERC1-205ENST00000559886 MINOS1Q5TGZ0 78 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 OR5AN1Q8NGI8 311 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 OR2A7Q96R45 310 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 NABP2Q9BQ15 211 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 MINOS1-NBL1R4GNA1 71 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 CENPVL3A0A0U1RRI6 287 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 GAPDHP04406 335 aaKnown RBP9.87□□□□□ -0.83
HERC1-205ENST00000559886 CEACAM3P40198 252 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 TAGLNQ01995 201 aaKnown RBP9.87□□□□□ -0.83
HERC1-205ENST00000559886 RPEQ96AT9 228 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 RANGRFQ9HD47 186 aaPredicted RBP9.87□□□□□ -0.83
HERC1-205ENST00000559886 TMED3Q9Y3Q3 217 aa9.87□□□□□ -0.83
HERC1-205ENST00000559886 A0A1W2PRD5 423 aa9.86□□□□□ -0.83
HERC1-205ENST00000559886 A0A1W2PRF3 423 aa9.86□□□□□ -0.83
HERC1-205ENST00000559886 A0A1W2PRM7 423 aa9.86□□□□□ -0.83
HERC1-205ENST00000559886 MPTX1A8MV57 137 aa9.86□□□□□ -0.83
HERC1-205ENST00000559886 J3QLI3 93 aa9.86□□□□□ -0.83
HERC1-205ENST00000559886 TXNL1O43396 289 aa9.86□□□□□ -0.83
HERC1-205ENST00000559886 IFNA21P01568 189 aa9.86□□□□□ -0.83
HERC1-205ENST00000559886 TPTE2P1Q5T6R2 138 aa9.86□□□□□ -0.83
HERC1-205ENST00000559886 GGNBP1Q5YKI7 109 aa9.86□□□□□ -0.83
HERC1-205ENST00000559886 LHFPL4Q7Z7J7 247 aa9.86□□□□□ -0.83
HERC1-205ENST00000559886 CIARTQ8N365 385 aaPredicted RBP9.86□□□□□ -0.83
HERC1-205ENST00000559886 PLEKHA2Q9HB19 425 aa9.86□□□□□ -0.83
HERC1-205ENST00000559886 TBL2Q9Y4P3 447 aaKnown RBP9.86□□□□□ -0.83
HERC1-205ENST00000559886 CELSR1Q9NYQ6 3014 aa9.86□□□□□ -0.83
HERC1-205ENST00000559886 NOTCH2Q04721 2471 aa9.86□□□□□ -0.83
HERC1-205ENST00000559886 MYO9AB2RTY4 2548 aa9.86□□□□□ -0.83
HERC1-205ENST00000559886 H0YJW9 148 aa9.85□□□□□ -0.83
HERC1-205ENST00000559886 S1PR2O95136 353 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms