RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 CBX3Q13185 183 aa12.53□□□□□ -0.4
RABGGTA-206ENST00000558649 KHDC1LQ5JSQ8 128 aa12.53□□□□□ -0.4
RABGGTA-206ENST00000558649 ZNF329Q86UD4 541 aa12.53□□□□□ -0.4
RABGGTA-206ENST00000558649 PDPNQ86YL7 162 aa12.53□□□□□ -0.4
RABGGTA-206ENST00000558649 BVESQ8NE79 360 aa12.53□□□□□ -0.4
RABGGTA-206ENST00000558649 OR5H2Q8NGV7 314 aa12.53□□□□□ -0.4
RABGGTA-206ENST00000558649 GPX8Q8TED1 209 aa12.53□□□□□ -0.4
RABGGTA-206ENST00000558649 CITED2Q99967 270 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-206ENST00000558649 FBXL15Q9H469 300 aa12.53□□□□□ -0.4
RABGGTA-206ENST00000558649 ADAM30Q9UKF2 790 aa12.53□□□□□ -0.4
RABGGTA-206ENST00000558649 GAB2Q9UQC2 676 aa12.53□□□□□ -0.4
RABGGTA-206ENST00000558649 KCNAB3O43448 404 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 RBBP9O75884 186 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 TSPAN15O95858 294 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 PPYP01298 95 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 DUTP33316 252 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 TAS2R46P59540 309 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 RTL8BQ17RB0 113 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 C5orf64Q2M2E5 130 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 C2orf68Q2NKX9 166 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 OR2B11Q5JQS5 317 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 TMEM17Q86X19 198 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 STPG2Q8N412 459 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 NPBQ8NG41 125 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 OR4X2Q8NGF9 303 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 WIPF2Q8TF74 440 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 CHPT1Q8WUD6 406 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 FLYWCH2Q96CP2 140 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 CLCC1Q96S66 551 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 DCUN1D5Q9BTE7 237 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 SCPEP1Q9HB40 452 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 METTL1Q9UBP6 276 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 ANAPC10Q9UM13 185 aa12.52□□□□□ -0.41
RABGGTA-206ENST00000558649 LINC00473A8K010 186 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 AP4M1O00189 453 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 RRHO14718 337 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 TNFSF12O43508 249 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 NDUFA3O95167 84 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 CSF1P09603 554 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 HRH1P35367 487 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 HERV-K104P61576 105 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 PRR31Q5SQ13 230 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 KCTD9Q7L273 389 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 ADTRPQ96IZ2 230 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 GPHA2Q96T91 129 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 TSNAXQ99598 290 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 SLC5A7Q9GZV3 580 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 PARP11Q9NR21 331 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 CCL28Q9NRJ3 127 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 TAS2R8Q9NYW2 309 aa12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 RSL24D1Q9UHA3 163 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 RBMX2Q9Y388 322 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-206ENST00000558649 TCRBV4S1A1TA0A5B7 111 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 SHOXO15266 292 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 SLC25A17O43808 307 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 SLC22A5O76082 557 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 CRYZL1O95825 349 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 IGLV2-14P01704 120 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 HLA-DRB1P01911 266 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 NAT1P18440 290 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 RCVRNP35243 200 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 SLC35B1P78383 322 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 PSG5Q15238 335 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 LIN54Q6MZP7 749 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 OR52I2Q8NH67 350 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 MCFD2Q8NI22 146 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 FAM110DQ8TAY7 271 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 ABHD5Q8WTS1 349 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 TCTEX1D2Q8WW35 142 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 DIRAS2Q96HU8 199 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 HARBI1Q96MB7 349 aa12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 ZNF2Q9BSG1 426 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 SLIRPQ9GZT3 109 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 RBM38Q9H0Z9 239 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-206ENST00000558649 SULT1C2O00338 296 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 ATP6V0E1O15342 81 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 FCGR3BO75015 233 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 VDAC1P21796 283 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 RPL30P62888 115 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 TAGLNQ01995 201 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 DYRK1AQ13627 763 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 IL18Q14116 193 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 TCTEX1D4Q5JR98 221 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 TREML4Q6UXN2 200 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 OVCH2Q7RTZ1 564 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 LYSMD2Q8IV50 215 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 GIMAP1Q8WWP7 306 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 DDB2Q92466 427 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 ABHD1Q96SE0 405 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 RNF5Q99942 180 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 TPSG1Q9NRR2 321 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 KLK11Q9UBX7 282 aa12.49□□□□□ -0.41
RABGGTA-206ENST00000558649 IGHV7-81A0A0B4J1V7 117 aa12.48□□□□□ -0.41
RABGGTA-206ENST00000558649 M0QYG6 137 aa12.48□□□□□ -0.41
RABGGTA-206ENST00000558649 FCN1O00602 326 aa12.48□□□□□ -0.41
RABGGTA-206ENST00000558649 RRASP10301 218 aa12.48□□□□□ -0.41
RABGGTA-206ENST00000558649 TSPAN5P62079 268 aa12.48□□□□□ -0.41
RABGGTA-206ENST00000558649 DGCR2P98153 550 aa12.48□□□□□ -0.41
RABGGTA-206ENST00000558649 NDUFA11Q86Y39 141 aa12.48□□□□□ -0.41
RABGGTA-206ENST00000558649 FCAMRQ8WWV6 532 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms