RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 ZNF182P17025 639 aaPredicted RBP6.69□□□□□ -1.34
TPM1-213ENST00000558400 VDAC1P21796 283 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 PRSS3P35030 304 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 TGFBR1P36897 503 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 ALDH3B2P48448 385 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 THBS3P49746 956 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 ARPC4P59998 168 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 NCS1P62166 190 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 PLGLAQ15195 96 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 CTF1Q16619 201 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 RTL8BQ17RB0 113 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 TMEM69Q5SWH9 247 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 GPR107Q5VW38 600 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 FAM131AQ6UXB0 335 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 ZNF329Q86UD4 541 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 DRAXINQ8NBI3 349 aaPredicted RBP6.69□□□□□ -1.34
TPM1-213ENST00000558400 C15orf40Q8WUR7 153 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 RITA1Q96K30 269 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 NOL4LQ96MY1 436 aaPredicted RBP6.69□□□□□ -1.34
TPM1-213ENST00000558400 BCL7BQ9BQE9 202 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 OR2D2Q9H210 308 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 OR51J1Q9H342 316 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 SLC35D1Q9NTN3 355 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 NECAP2Q9NVZ3 263 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 SDHAF2Q9NX18 166 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 COMMD3Q9UBI1 195 aa6.69□□□□□ -1.34
TPM1-213ENST00000558400 TET2Q6N021 2002 aaPredicted RBP6.68□□□□□ -1.34
TPM1-213ENST00000558400 LINC01548A6NM66 108 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 TSPAN15O95858 294 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 PF4V1P10720 104 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 RPL5P46777 297 aaKnown RBP6.68□□□□□ -1.34
TPM1-213ENST00000558400 FOXE3Q13461 319 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 MSMO1Q15800 293 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 TCTEX1D4Q5JR98 221 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 CXorf66Q5JRM2 361 aaPredicted RBP6.68□□□□□ -1.34
TPM1-213ENST00000558400 ZNF562Q6V9R5 426 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 GLDNQ6ZMI3 551 aaPredicted RBP6.68□□□□□ -1.34
TPM1-213ENST00000558400 ZNF645Q8N7E2 425 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 TCTEX1D1Q8N7M0 179 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 ZNF383Q8NA42 475 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 ZBTB34Q8NCN2 500 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 WFDC9Q8NEX5 89 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 OR5AP2Q8NGF4 316 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 GIMAP1Q8WWP7 306 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 BORCS5Q969J3 196 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 IFT46Q9NQC8 304 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 PRELID3BQ9Y3B1 194 aa6.68□□□□□ -1.34
TPM1-213ENST00000558400 RYR3Q15413 4870 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 ADARB2-AS1A8MUL3 147 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 SULT1C2O00338 296 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 SHOXO15266 292 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 TUSC2O75896 110 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 IGHG4P01861 327 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 NFYAP23511 347 aaPredicted RBP6.67□□□□□ -1.34
TPM1-213ENST00000558400 CD40LGP29965 261 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 FCGR2CP31995 323 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 DUTP33316 252 aaKnown RBP6.67□□□□□ -1.34
TPM1-213ENST00000558400 CDX1P47902 265 aaPredicted RBP6.67□□□□□ -1.34
TPM1-213ENST00000558400 TMBIM6P55061 237 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 TAS2R46P59540 309 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 RPL23AP62750 156 aaKnown RBP6.67□□□□□ -1.34
TPM1-213ENST00000558400 CX3CL1P78423 397 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 PSG5Q15238 335 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 TMEM177Q53S58 311 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 KHDC1LQ5JSQ8 128 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 TMEM65Q6PI78 240 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 DHRS11Q6UWP2 260 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 GVQW1Q8N7I0 195 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 RNF152Q8N8N0 203 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 OSR1Q8TAX0 266 aaPredicted RBP6.67□□□□□ -1.34
TPM1-213ENST00000558400 RAB2BQ8WUD1 216 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 TMEM68Q96MH6 324 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 HSD17B10Q99714 261 aaKnown RBP6.67□□□□□ -1.34
TPM1-213ENST00000558400 HSPB9Q9BQS6 159 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 AIFM2Q9BRQ8 373 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 FBXL15Q9H469 300 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 SCPEP1Q9HB40 452 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 METTL1Q9UBP6 276 aaKnown RBP6.67□□□□□ -1.34
TPM1-213ENST00000558400 LINC00527Q9UJ94 153 aa6.67□□□□□ -1.34
TPM1-213ENST00000558400 MRPS7Q9Y2R9 242 aaKnown RBP6.67□□□□□ -1.34
TPM1-213ENST00000558400 IGHV7-81A0A0B4J1V7 117 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 TRAV41A0A0B4J266 112 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 A0A1W2PRX2 142 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 FAM25AB3EWG3 89 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 FAM25CB3EWG5 89 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 FAM25GB3EWG6 89 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 CREBL2O60519 120 aaPredicted RBP6.66□□□□□ -1.34
TPM1-213ENST00000558400 DUS4LO95620 317 aaKnown RBP6.66□□□□□ -1.34
TPM1-213ENST00000558400 PF4P02776 101 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 IGKV1-16P04430 117 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 NAT1P18440 290 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 CNTFRP26992 372 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 PPIFP30405 207 aaKnown RBP6.66□□□□□ -1.34
TPM1-213ENST00000558400 MYCNOSP40205 109 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 CRIP2P52943 208 aaPredicted RBP6.66□□□□□ -1.34
TPM1-213ENST00000558400 TAS2R20P59543 309 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 CDK10Q15131 360 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 VMA21Q3ZAQ7 101 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 AKIRIN2Q53H80 203 aa6.66□□□□□ -1.34
TPM1-213ENST00000558400 C4orf48Q5BLP8 95 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms