RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PLAC9Q5JTB6 97 aa11.99□□□□□ -0.49
TPM1-211ENST00000558314 ZNF562Q6V9R5 426 aa11.99□□□□□ -0.49
TPM1-211ENST00000558314 SBSPONQ8IVN8 264 aa11.99□□□□□ -0.49
TPM1-211ENST00000558314 FAM89BQ8N5H3 189 aa11.99□□□□□ -0.49
TPM1-211ENST00000558314 OR6Q1Q8NGQ2 317 aa11.99□□□□□ -0.49
TPM1-211ENST00000558314 NRG4Q8WWG1 115 aa11.99□□□□□ -0.49
TPM1-211ENST00000558314 OR2D2Q9H210 308 aa11.99□□□□□ -0.49
TPM1-211ENST00000558314 V9GY05 133 aa11.99□□□□□ -0.49
TPM1-211ENST00000558314 TMEM272A0A1B0GTI8 110 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 C13orf42A0A1B0GVH6 325 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 TRIM64CA6NLI5 447 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 ITGB1BP1O14713 200 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 FABP7O15540 132 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 PROP1O75360 226 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 APELAP0DMC3 54 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 PSMA1P25786 263 aaKnown RBP11.98□□□□□ -0.49
TPM1-211ENST00000558314 CRIP2P52943 208 aaPredicted RBP11.98□□□□□ -0.49
TPM1-211ENST00000558314 MLLT11Q13015 90 aaPredicted RBP11.98□□□□□ -0.49
TPM1-211ENST00000558314 AKIRIN2Q53H80 203 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 IGSF11Q5DX21 431 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 ACSM6Q6P461 480 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 CD200R1LQ6Q8B3 271 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 PDPNQ86YL7 162 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 RAB3CQ96E17 227 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 MGLLQ99685 303 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 RNF5Q99942 180 aa11.98□□□□□ -0.49
TPM1-211ENST00000558314 SORL1Q92673 2214 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 FOXI3A8MTJ6 420 aaPredicted RBP11.97□□□□□ -0.49
TPM1-211ENST00000558314 J3QRK9 145 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 ARPC1BO15143 372 aaKnown RBP11.97□□□□□ -0.49
TPM1-211ENST00000558314 FRMD6-AS1P0C7T7 363 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 GSTT2P0CG29 244 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 GSTT2BP0CG30 244 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 CD37P11049 281 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 GNB3P16520 340 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 PJVKQ0ZLH3 352 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 CBX3Q13185 183 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 MOGAT2Q3SYC2 334 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 OR4A4PQ8NGN8 299 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 OR10J5Q8NHC4 309 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 PTX4Q96A99 478 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 RHOVQ96L33 236 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 HARBI1Q96MB7 349 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 RCHY1Q96PM5 261 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 PHB2Q99623 299 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 GINS4Q9BRT9 223 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 ELOVL1Q9BW60 279 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 DUSP21Q9H596 190 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 SLA2Q9H6Q3 261 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 ZNF230Q9UIE0 474 aaPredicted RBP11.97□□□□□ -0.49
TPM1-211ENST00000558314 RAB22AQ9UL26 194 aa11.97□□□□□ -0.49
TPM1-211ENST00000558314 SMIM30A4D0T7 59 aa11.96□□□□□ -0.49
TPM1-211ENST00000558314 ERICH4A6NGS2 130 aa11.96□□□□□ -0.49
TPM1-211ENST00000558314 PDCD5O14737 125 aa11.96□□□□□ -0.49
TPM1-211ENST00000558314 SHOXO15266 292 aa11.96□□□□□ -0.49
TPM1-211ENST00000558314 SPDEFO95238 335 aa11.96□□□□□ -0.49
TPM1-211ENST00000558314 OR10A3P58181 314 aa11.96□□□□□ -0.49
TPM1-211ENST00000558314 ANKRD13BQ86YJ7 626 aa11.96□□□□□ -0.49
TPM1-211ENST00000558314 POC5Q8NA72 575 aa11.96□□□□□ -0.49
TPM1-211ENST00000558314 BVESQ8NE79 360 aa11.96□□□□□ -0.49
TPM1-211ENST00000558314 CNBD2Q96M20 576 aa11.96□□□□□ -0.49
TPM1-211ENST00000558314 ACOT13Q9NPJ3 140 aa11.96□□□□□ -0.49
TPM1-211ENST00000558314 COA4Q9NYJ1 87 aa11.96□□□□□ -0.49
TPM1-211ENST00000558314 A0A0B4J203 849 aa11.95□□□□□ -0.5
TPM1-211ENST00000558314 FCGR3AP08637 254 aa11.95□□□□□ -0.5
TPM1-211ENST00000558314 CRHBPP24387 322 aa11.95□□□□□ -0.5
TPM1-211ENST00000558314 GADD45AP24522 165 aa11.95□□□□□ -0.5
TPM1-211ENST00000558314 MYL9P24844 172 aa11.95□□□□□ -0.5
TPM1-211ENST00000558314 TALDO1P37837 337 aa11.95□□□□□ -0.5
TPM1-211ENST00000558314 SERPINB10P48595 397 aa11.95□□□□□ -0.5
TPM1-211ENST00000558314 PSMD7P51665 324 aa11.95□□□□□ -0.5
TPM1-211ENST00000558314 ARFRP1Q13795 201 aa11.95□□□□□ -0.5
TPM1-211ENST00000558314 PRSS48Q7RTY5 328 aa11.95□□□□□ -0.5
TPM1-211ENST00000558314 ZMAT4Q9H898 229 aa11.95□□□□□ -0.5
TPM1-211ENST00000558314 SDHAF2Q9NX18 166 aa11.95□□□□□ -0.5
TPM1-211ENST00000558314 MPPED1O15442 326 aa11.94□□□□□ -0.5
TPM1-211ENST00000558314 RANBP1P43487 201 aa11.94□□□□□ -0.5
TPM1-211ENST00000558314 RTL8BQ17RB0 113 aa11.94□□□□□ -0.5
TPM1-211ENST00000558314 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.94□□□□□ -0.5
TPM1-211ENST00000558314 OR10R2Q8NGX6 335 aa11.94□□□□□ -0.5
TPM1-211ENST00000558314 RANGRFQ9HD47 186 aaPredicted RBP11.94□□□□□ -0.5
TPM1-211ENST00000558314 STUB1Q9UNE7 303 aa11.94□□□□□ -0.5
TPM1-211ENST00000558314 KCNK7Q9Y2U2 307 aa11.94□□□□□ -0.5
TPM1-211ENST00000558314 RYR3Q15413 4870 aa11.94□□□□□ -0.5
TPM1-211ENST00000558314 A0A0G2JLM5 398 aa11.93□□□□□ -0.5
TPM1-211ENST00000558314 C3orf84H3BNL1 204 aa11.93□□□□□ -0.5
TPM1-211ENST00000558314 LDLRAD4O15165 306 aa11.93□□□□□ -0.5
TPM1-211ENST00000558314 IGLV2-23P01705 113 aa11.93□□□□□ -0.5
TPM1-211ENST00000558314 LGALS7P47929 136 aa11.93□□□□□ -0.5
TPM1-211ENST00000558314 TNXAQ16473 311 aa11.93□□□□□ -0.5
TPM1-211ENST00000558314 IZUMO2Q6UXV1 221 aa11.93□□□□□ -0.5
TPM1-211ENST00000558314 IDO2Q6ZQW0 420 aa11.93□□□□□ -0.5
TPM1-211ENST00000558314 ZNF367Q7RTV3 350 aa11.93□□□□□ -0.5
TPM1-211ENST00000558314 ACOT12Q8WYK0 555 aa11.93□□□□□ -0.5
TPM1-211ENST00000558314 ATG5Q9H1Y0 275 aa11.93□□□□□ -0.5
TPM1-211ENST00000558314 PALMDQ9NP74 551 aa11.93□□□□□ -0.5
TPM1-211ENST00000558314 TRBV6-7A0A0A0MS04 114 aa11.92□□□□□ -0.5
TPM1-211ENST00000558314 CRYZL1O95825 349 aa11.92□□□□□ -0.5
TPM1-211ENST00000558314 HIST1H1DP16402 221 aaKnown RBP11.92□□□□□ -0.5
TPM1-211ENST00000558314 RAB3BP20337 219 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms