RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 ZNF660Q6AZW8 331 aaPredicted RBP9.56□□□□□ -0.88
CDK12-203ENST00000558240 GLDNQ6ZMI3 551 aaPredicted RBP9.56□□□□□ -0.88
CDK12-203ENST00000558240 PDPNQ86YL7 162 aa9.56□□□□□ -0.88
CDK12-203ENST00000558240 Q8N9W7 124 aa9.56□□□□□ -0.88
CDK12-203ENST00000558240 ZNF383Q8NA42 475 aa9.56□□□□□ -0.88
CDK12-203ENST00000558240 WFDC12Q8WWY7 111 aa9.56□□□□□ -0.88
CDK12-203ENST00000558240 SERTAD4Q9NUC0 356 aa9.56□□□□□ -0.88
CDK12-203ENST00000558240 LIN7CQ9NUP9 197 aaKnown RBP9.56□□□□□ -0.88
CDK12-203ENST00000558240 SIGLEC9Q9Y336 463 aa9.56□□□□□ -0.88
CDK12-203ENST00000558240 TNCP24821 2201 aa9.56□□□□□ -0.88
CDK12-203ENST00000558240 TRRAPQ9Y4A5 3859 aa9.56□□□□□ -0.88
CDK12-203ENST00000558240 HAX1O00165 279 aa9.55□□□□□ -0.88
CDK12-203ENST00000558240 RRASP10301 218 aa9.55□□□□□ -0.88
CDK12-203ENST00000558240 DUTP33316 252 aaKnown RBP9.55□□□□□ -0.88
CDK12-203ENST00000558240 VDAC2P45880 294 aaPredicted RBP9.55□□□□□ -0.88
CDK12-203ENST00000558240 LINC00205P59089 165 aa9.55□□□□□ -0.88
CDK12-203ENST00000558240 MMDQ15546 238 aa9.55□□□□□ -0.88
CDK12-203ENST00000558240 ARSJQ5FYB0 599 aaPredicted RBP9.55□□□□□ -0.88
CDK12-203ENST00000558240 FOXB2Q5VYV0 432 aa9.55□□□□□ -0.88
CDK12-203ENST00000558240 SHISA2Q6UWI4 295 aa9.55□□□□□ -0.88
CDK12-203ENST00000558240 FAM71E2Q8N5Q1 922 aa9.55□□□□□ -0.88
CDK12-203ENST00000558240 ZBTB34Q8NCN2 500 aa9.55□□□□□ -0.88
CDK12-203ENST00000558240 NPBQ8NG41 125 aa9.55□□□□□ -0.88
CDK12-203ENST00000558240 OR6F1Q8NGZ6 308 aa9.55□□□□□ -0.88
CDK12-203ENST00000558240 RITA1Q96K30 269 aa9.55□□□□□ -0.88
CDK12-203ENST00000558240 SLC35D1Q9NTN3 355 aa9.55□□□□□ -0.88
CDK12-203ENST00000558240 ZNF107Q9UII5 783 aaPredicted RBP9.55□□□□□ -0.88
CDK12-203ENST00000558240 RBMX2Q9Y388 322 aaKnown RBP9.55□□□□□ -0.88
CDK12-203ENST00000558240 NBR2O15453 112 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 GSTZ1O43708 216 aaPredicted RBP9.54□□□□□ -0.88
CDK12-203ENST00000558240 NDUFA3O95167 84 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 IGHG2P01859 326 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 TBPP20226 339 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 HERV-K104P61576 105 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 DGCR2P98153 550 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 RTL8BQ17RB0 113 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 C9orf152Q5JTZ5 239 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 VAX1Q5SQQ9 334 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 TMEM229BQ8NBD8 167 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 SMIM4Q8WVI0 70 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 SECTM1Q8WVN6 248 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 DDB2Q92466 427 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 BORCS5Q969J3 196 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 MOB3AQ96BX8 217 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 FLYWCH2Q96CP2 140 aaKnown RBP9.54□□□□□ -0.88
CDK12-203ENST00000558240 RBMXL1Q96E39 390 aaKnown RBP9.54□□□□□ -0.88
CDK12-203ENST00000558240 HSD17B10Q99714 261 aaKnown RBP9.54□□□□□ -0.88
CDK12-203ENST00000558240 RASL11BQ9BPW5 248 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 ZNF2Q9BSG1 426 aaPredicted RBP9.54□□□□□ -0.88
CDK12-203ENST00000558240 WNT10AQ9GZT5 417 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 SLC5A7Q9GZV3 580 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 KIAA1456Q9P272 454 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 CMYA5Q8N3K9 4069 aa9.54□□□□□ -0.88
CDK12-203ENST00000558240 TET2Q6N021 2002 aaPredicted RBP9.53□□□□□ -0.88
CDK12-203ENST00000558240 SH2D7A6NKC9 451 aaPredicted RBP9.53□□□□□ -0.88
CDK12-203ENST00000558240 LINC00473A8K010 186 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 PEX14O75381 377 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 IGKV1-16P04430 117 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 PTBP1P26599 531 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDK12-203ENST00000558240 CNTFRP26992 372 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 LGALS7P47929 136 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 TAS2R19P59542 299 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 FXYD4P59646 89 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 TSPAN5P62079 268 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 CBX3Q13185 183 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 EIF4EBP1Q13541 118 aaPredicted RBP9.53□□□□□ -0.88
CDK12-203ENST00000558240 C5orf64Q2M2E5 130 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 RNASE12Q5GAN4 147 aaKnown RBP9.53□□□□□ -0.88
CDK12-203ENST00000558240 ZNF66Q6ZN08 573 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 KLHDC1Q8N7A1 406 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 WIPF2Q8TF74 440 aaPredicted RBP9.53□□□□□ -0.88
CDK12-203ENST00000558240 TSNAXQ99598 290 aaKnown RBP9.53□□□□□ -0.88
CDK12-203ENST00000558240 CITED1Q99966 193 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 CCL28Q9NRJ3 127 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 PRELID3BQ9Y3B1 194 aa9.53□□□□□ -0.88
CDK12-203ENST00000558240 A6NHS1 94 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 RRHO14718 337 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 KCNAB3O43448 404 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 SPDEFO95238 335 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 HLA-DRB1P01911 266 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 CD74P04233 296 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 CD3DP04234 171 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 IFNA6P05013 189 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 VSIG10L2P0DP72 767 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 GNRHRP30968 328 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 ETV6P41212 452 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 KRTAP10-3P60369 221 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 RPS16P62249 146 aaKnown RBP9.52□□□□□ -0.89
CDK12-203ENST00000558240 TMEM95Q3KNT9 176 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 TMEM177Q53S58 311 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 RNASE10Q5GAN6 216 aaKnown RBP9.52□□□□□ -0.89
CDK12-203ENST00000558240 LPCAT3Q6P1A2 487 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 KCTD9Q7L273 389 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 CCDC190Q86UF4 302 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 TMEM17Q86X19 198 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 MFSD4AQ8N468 514 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 ARRDC1Q8N5I2 433 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 BVESQ8NE79 360 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 OR6Q1Q8NGQ2 317 aa9.52□□□□□ -0.89
CDK12-203ENST00000558240 TAS2R8Q9NYW2 309 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms