RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 NOTCH2Q04721 2471 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 A0A1W2PPE3 182 aa10.07□□□□□ -0.8
TPM1-209ENST00000558072 C9orf170A2RU37 121 aa10.07□□□□□ -0.8
TPM1-209ENST00000558072 IGLV2-14P01704 120 aa10.07□□□□□ -0.8
TPM1-209ENST00000558072 PI3P19957 117 aa10.07□□□□□ -0.8
TPM1-209ENST00000558072 DHRS2Q13268 280 aa10.07□□□□□ -0.8
TPM1-209ENST00000558072 AANATQ16613 207 aa10.07□□□□□ -0.8
TPM1-209ENST00000558072 HCP5Q6MZN7 132 aa10.07□□□□□ -0.8
TPM1-209ENST00000558072 LIN54Q6MZP7 749 aa10.07□□□□□ -0.8
TPM1-209ENST00000558072 IL17RELQ6ZVW7 336 aa10.07□□□□□ -0.8
TPM1-209ENST00000558072 ODF3L1Q8IXM7 274 aa10.07□□□□□ -0.8
TPM1-209ENST00000558072 ZNF251Q9BRH9 671 aa10.07□□□□□ -0.8
TPM1-209ENST00000558072 GSX1Q9H4S2 264 aaPredicted RBP10.07□□□□□ -0.8
TPM1-209ENST00000558072 MYO9AB2RTY4 2548 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 TRAV40A0A0B4J280 105 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 C7orf66A4D0T2 115 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 A8MV72 311 aaPredicted RBP10.06□□□□□ -0.8
TPM1-209ENST00000558072 LY6LH3BQJ8 138 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 SSNA1O43805 119 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 HPRT1P00492 218 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 HRASP01112 189 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 IFNA21P01568 189 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 FBP1P09467 338 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 CD99P14209 185 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 SPNP16150 400 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 UCP1P25874 307 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 CD1BP29016 333 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 LGALS7P47929 136 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 ERVK-16P61578 105 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 KLRD1Q13241 179 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 PPP1R1AQ13522 171 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 EIF4EBP1Q13541 118 aaPredicted RBP10.06□□□□□ -0.8
TPM1-209ENST00000558072 RPL39P5Q59GN2 51 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 LIAT1Q6ZQX7 453 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 ZNF695Q8IW36 515 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 FAM219AQ8IW50 185 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 SPAG16Q8N0X2 631 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 C12orf45Q8N5I9 185 aaPredicted RBP10.06□□□□□ -0.8
TPM1-209ENST00000558072 LRTM2Q8N967 370 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 ADAD2Q8NCV1 583 aaKnown RBP10.06□□□□□ -0.8
TPM1-209ENST00000558072 OR5AN1Q8NGI8 311 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 OR4C13Q8NGP0 309 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 OR51H1Q8NH63 302 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 OSR1Q8TAX0 266 aaPredicted RBP10.06□□□□□ -0.8
TPM1-209ENST00000558072 MITD1Q8WV92 249 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 ASB13Q8WXK3 278 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 MS4A7Q9GZW8 240 aaPredicted RBP10.06□□□□□ -0.8
TPM1-209ENST00000558072 TMEM222Q9H0R3 208 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 OR51J1Q9H342 316 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 PLEKHA2Q9HB19 425 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 SLC35D1Q9NTN3 355 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 COMMD9Q9P000 198 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 WASHC3Q9Y3C0 194 aa10.06□□□□□ -0.8
TPM1-209ENST00000558072 ZNF469Q96JG9 3925 aaPredicted RBP10.05□□□□□ -0.8
TPM1-209ENST00000558072 IGHV3OR16-10A0A075B7F0 116 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 IGHV1-3A0A0C4DH29 117 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 H7C2Y5 167 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 TNFSF12O43508 249 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 FAM106CPP0CH98 169 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 CT45A6P0DMU7 189 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 CT45A5P0DMU8 189 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 CT45A7P0DMV0 189 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 SAA4P35542 130 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 DYNLT3P51808 116 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 C9orf139Q6ZV77 190 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 MOB3BQ86TA1 216 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 THNSL2Q86YJ6 484 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 PDZD9Q8IXQ8 264 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 CADM3Q8N126 398 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 VSTM2AQ8TAG5 236 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 RBPMSQ93062 196 aaKnown RBP10.05□□□□□ -0.8
TPM1-209ENST00000558072 TMEM230Q96A57 120 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 FLYWCH2Q96CP2 140 aaKnown RBP10.05□□□□□ -0.8
TPM1-209ENST00000558072 RRNAD1Q96FB5 475 aaKnown RBP10.05□□□□□ -0.8
TPM1-209ENST00000558072 TMEM56Q96MV1 263 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 SPIN2AQ99865 258 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 SPIN2BQ9BPZ2 258 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 NABP2Q9BQ15 211 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 MEGF9Q9H1U4 602 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 MED28Q9H204 178 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 TMED3Q9Y3Q3 217 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 TMEM56-RWDD3S4R434 201 aa10.05□□□□□ -0.8
TPM1-209ENST00000558072 CELSR1Q9NYQ6 3014 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 A0A1W2PRD5 423 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 A0A1W2PRF3 423 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 A0A1W2PRM7 423 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 FCGR3BO75015 233 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 CDS2O95674 445 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 AVPP01185 164 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 OR5AC1P0C628 307 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 TRAPPC2P0DI81 140 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 TRAPPC2BP0DI82 140 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 VSIG10L2P0DP72 767 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 SRP14P37108 136 aaKnown RBP10.04□□□□□ -0.8
TPM1-209ENST00000558072 TMEM187Q14656 261 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 SSX2Q16385 188 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 OR8H1Q8NGG4 311 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 CASTOR1Q8WTX7 329 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 GLYATL2Q8WU03 294 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 CAPSLQ8WWF8 208 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms