RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 THOC7Q6I9Y2 204 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-205ENST00000558036 TMUB2Q71RG4 321 aa16.66■□□□□ 0.26
SNRPA1-205ENST00000558036 OR10X1Q8NGY0 326 aa16.66■□□□□ 0.26
SNRPA1-205ENST00000558036 RAB39BQ96DA2 213 aa16.66■□□□□ 0.26
SNRPA1-205ENST00000558036 ARL6Q9H0F7 186 aa16.66■□□□□ 0.26
SNRPA1-205ENST00000558036 TMEM133Q9H2Q1 129 aa16.66■□□□□ 0.26
SNRPA1-205ENST00000558036 SESN1Q9Y6P5 492 aa16.66■□□□□ 0.26
SNRPA1-205ENST00000558036 K7EPK0 472 aa16.66■□□□□ 0.26
SNRPA1-205ENST00000558036 DIAPH2-AS1Q14236 149 aa16.66■□□□□ 0.26
SNRPA1-205ENST00000558036 FAM71E2Q8N5Q1 922 aa16.66■□□□□ 0.26
SNRPA1-205ENST00000558036 MAGT1Q9H0U3 335 aa16.66■□□□□ 0.26
SNRPA1-205ENST00000558036 CACNG5Q9UF02 275 aa16.66■□□□□ 0.26
SNRPA1-205ENST00000558036 GAB2Q9UQC2 676 aa16.66■□□□□ 0.26
SNRPA1-205ENST00000558036 MSGN1A6NI15 193 aa16.65■□□□□ 0.26
SNRPA1-205ENST00000558036 DEDDO75618 318 aa16.65■□□□□ 0.26
SNRPA1-205ENST00000558036 PDLIM4P50479 330 aa16.65■□□□□ 0.26
SNRPA1-205ENST00000558036 ZNF383Q8NA42 475 aa16.65■□□□□ 0.26
SNRPA1-205ENST00000558036 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-205ENST00000558036 CLDND2Q8NHS1 167 aa16.65■□□□□ 0.26
SNRPA1-205ENST00000558036 SPIN2AQ99865 258 aa16.65■□□□□ 0.26
SNRPA1-205ENST00000558036 SPIN2BQ9BPZ2 258 aa16.65■□□□□ 0.26
SNRPA1-205ENST00000558036 HEXA-AS1Q9H8Q6 139 aa16.65■□□□□ 0.26
SNRPA1-205ENST00000558036 A0A1W2PPH5 198 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 KRTAP10-9P60411 292 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 LCN2P80188 198 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 OPCMLQ14982 345 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 Q8N7P7 452 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 DDB2Q92466 427 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 S1PR3Q99500 378 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 CSMD1Q96PZ7 3565 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 A0A087X0M5 115 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 A0A1B0GX30 115 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 KIAA1324LA8MWY0 1029 aaPredicted RBP16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 PET100P0DJ07 73 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 COX7A1P24310 79 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 S100A11P31949 105 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 POLR2GP62487 172 aaKnown RBP eCLIP16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 ZNF787Q6DD87 383 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 VKORC1L1Q8N0U8 176 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 INO80EQ8NBZ0 244 aaPredicted RBP16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 OR9G1Q8NH87 305 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 FAM168AQ92567 244 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 LSM10Q969L4 123 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 SIRT7Q9NRC8 400 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 ABCA12Q86UK0 2595 aa16.64■□□□□ 0.25
SNRPA1-205ENST00000558036 IGHV2-26A0A0B4J1V2 119 aa16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 ST8SIA3O43173 380 aa16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 CT45A6P0DMU7 189 aa16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 CT45A5P0DMU8 189 aa16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 CT45A7P0DMV0 189 aa16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 LYL1P12980 280 aa16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 NKX2-1P43699 371 aaPredicted RBP16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 LMO4P61968 165 aa16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 RCL1Q9Y2P8 373 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 PRELID3BQ9Y3B1 194 aa16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 MED13LQ71F56 2210 aa16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 PTPN13Q12923 2485 aa16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 ZNF833PQ6ZTB9 187 aa16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 ACOT7LQ6ZUV0 252 aa16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 SSX9Q7RTT3 188 aa16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 TCTEX1D1Q8N7M0 179 aa16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 MRPL20Q9BYC9 149 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-205ENST00000558036 A0A1B0GU03 582 aa16.62■□□□□ 0.25
SNRPA1-205ENST00000558036 MARCH11A6NNE9 402 aa16.62■□□□□ 0.25
SNRPA1-205ENST00000558036 RLN2P04090 185 aa16.62■□□□□ 0.25
SNRPA1-205ENST00000558036 SMCO1Q147U7 214 aa16.62■□□□□ 0.25
SNRPA1-205ENST00000558036 CD300LFQ8TDQ1 290 aa16.62■□□□□ 0.25
SNRPA1-205ENST00000558036 GON7Q9BXV9 100 aa16.62■□□□□ 0.25
SNRPA1-205ENST00000558036 POMT1Q9Y6A1 747 aa16.62■□□□□ 0.25
SNRPA1-205ENST00000558036 SSSCA1O60232 199 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 PITX3O75364 302 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 CRYZL1O95825 349 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 THBS3P49746 956 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 ZNF596Q8TC21 504 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 R3HDM4Q96D70 268 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 MMP26Q9NRE1 261 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 MMP24Q9Y5R2 645 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 PIGBOS1A0A0B4J2F0 54 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 TOR1AO14656 332 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 HIST2H2BCQ6DN03 193 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 KCNRGQ8N5I3 272 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 LINC00311Q8N616 119 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 C8orf31Q8N9H6 132 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 DMBX1Q8NFW5 382 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 C10orf105Q8TEF2 133 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 SLA2Q9H6Q3 261 aa16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 FAM212BQ9NTI7 297 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-205ENST00000558036 OR2F2O95006 317 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 IGKV1-16P04430 117 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 P0C879 139 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 OR2F1Q13607 317 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 PDZD9Q8IXQ8 264 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 PNKDQ8N490 385 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 OR8H1Q8NGG4 311 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 PIMREGQ9BSJ6 248 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 LPAR2Q9HBW0 351 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 NSG2Q9Y328 171 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 IGHV4-30-2A0A087WSY4 118 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 IGHV4-61A0A0C4DH41 118 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 hCG_1809904A0A1W2PP81 198 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms