RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ABCA11PQ4W5N1 156 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 VAX1Q5SQQ9 334 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 C11orf88Q6PI97 169 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 TMEM229BQ8NBD8 167 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 OR8H1Q8NGG4 311 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 OR2T6Q8NHC8 308 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 RITA1Q96K30 269 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 SLC5A7Q9GZV3 580 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 CCL28Q9NRJ3 127 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 SIGLEC9Q9Y336 463 aa20.35■□□□□ 0.85
SMAD6-202ENST00000557916 APOA2P02652 100 aa20.34■□□□□ 0.85
SMAD6-202ENST00000557916 TBPP20226 339 aa20.34■□□□□ 0.85
SMAD6-202ENST00000557916 DUTP33316 252 aaKnown RBP20.34■□□□□ 0.85
SMAD6-202ENST00000557916 F2RL1P55085 397 aa20.34■□□□□ 0.85
SMAD6-202ENST00000557916 TAS2R19P59542 299 aa20.34■□□□□ 0.85
SMAD6-202ENST00000557916 RNASE10Q5GAN6 216 aaKnown RBP20.34■□□□□ 0.85
SMAD6-202ENST00000557916 SPANXN2Q5MJ10 180 aa20.34■□□□□ 0.85
SMAD6-202ENST00000557916 Q6ZS46 218 aa20.34■□□□□ 0.85
SMAD6-202ENST00000557916 TMEM17Q86X19 198 aa20.34■□□□□ 0.85
SMAD6-202ENST00000557916 C5orf56Q8N8D9 126 aa20.34■□□□□ 0.85
SMAD6-202ENST00000557916 PLSCR3Q9NRY6 295 aa20.34■□□□□ 0.85
SMAD6-202ENST00000557916 ZNF107Q9UII5 783 aaPredicted RBP20.34■□□□□ 0.85
SMAD6-202ENST00000557916 RNF114Q9Y508 228 aa20.34■□□□□ 0.85
SMAD6-202ENST00000557916 SH2D7A6NKC9 451 aaPredicted RBP20.33■□□□□ 0.84
SMAD6-202ENST00000557916 PYDC2Q56P42 97 aa20.33■□□□□ 0.84
SMAD6-202ENST00000557916 Q8N2B8 174 aa20.33■□□□□ 0.84
SMAD6-202ENST00000557916 MOB3AQ96BX8 217 aa20.33■□□□□ 0.84
SMAD6-202ENST00000557916 ADTRPQ96IZ2 230 aa20.33■□□□□ 0.84
SMAD6-202ENST00000557916 TINAGL1Q9GZM7 467 aaPredicted RBP20.33■□□□□ 0.84
SMAD6-202ENST00000557916 SLC35D1Q9NTN3 355 aa20.33■□□□□ 0.84
SMAD6-202ENST00000557916 TENM1Q9UKZ4 2725 aa20.32■□□□□ 0.84
SMAD6-202ENST00000557916 IFNA6P05013 189 aa20.32■□□□□ 0.84
SMAD6-202ENST00000557916 CSF1P09603 554 aa20.32■□□□□ 0.84
SMAD6-202ENST00000557916 PTBP1P26599 531 aaKnown RBP eCLIP20.32■□□□□ 0.84
SMAD6-202ENST00000557916 ETV6P41212 452 aa20.32■□□□□ 0.84
SMAD6-202ENST00000557916 TAGLNQ01995 201 aaKnown RBP20.32■□□□□ 0.84
SMAD6-202ENST00000557916 MMDQ15546 238 aa20.32■□□□□ 0.84
SMAD6-202ENST00000557916 MSMO1Q15800 293 aa20.32■□□□□ 0.84
SMAD6-202ENST00000557916 CNPY1Q3B7I2 92 aa20.32■□□□□ 0.84
SMAD6-202ENST00000557916 STAB1Q9NY15 2570 aa20.31■□□□□ 0.84
SMAD6-202ENST00000557916 LINC00473A8K010 186 aa20.31■□□□□ 0.84
SMAD6-202ENST00000557916 CD74P04233 296 aa20.31■□□□□ 0.84
SMAD6-202ENST00000557916 ARSJQ5FYB0 599 aaPredicted RBP20.31■□□□□ 0.84
SMAD6-202ENST00000557916 C9orf152Q5JTZ5 239 aa20.31■□□□□ 0.84
SMAD6-202ENST00000557916 PDPNQ86YL7 162 aa20.31■□□□□ 0.84
SMAD6-202ENST00000557916 Q8N9W7 124 aa20.31■□□□□ 0.84
SMAD6-202ENST00000557916 SPATA3Q8NHX4 192 aa20.31■□□□□ 0.84
SMAD6-202ENST00000557916 TAS2R8Q9NYW2 309 aa20.31■□□□□ 0.84
SMAD6-202ENST00000557916 RAB3DO95716 219 aa20.3■□□□□ 0.84
SMAD6-202ENST00000557916 IGKV1-16P04430 117 aa20.3■□□□□ 0.84
SMAD6-202ENST00000557916 CNTFRP26992 372 aa20.3■□□□□ 0.84
SMAD6-202ENST00000557916 ZNF79Q15937 498 aa20.3■□□□□ 0.84
SMAD6-202ENST00000557916 STEAP1BQ6NZ63 245 aa20.3■□□□□ 0.84
SMAD6-202ENST00000557916 ZBTB34Q8NCN2 500 aa20.3■□□□□ 0.84
SMAD6-202ENST00000557916 DDB2Q92466 427 aa20.3■□□□□ 0.84
SMAD6-202ENST00000557916 HSD17B10Q99714 261 aaKnown RBP20.3■□□□□ 0.84
SMAD6-202ENST00000557916 THAP7Q9BT49 309 aaPredicted RBP20.3■□□□□ 0.84
SMAD6-202ENST00000557916 NBR2O15453 112 aa20.29■□□□□ 0.84
SMAD6-202ENST00000557916 RTL8BQ17RB0 113 aa20.29■□□□□ 0.84
SMAD6-202ENST00000557916 ZNF66Q6ZN08 573 aa20.29■□□□□ 0.84
SMAD6-202ENST00000557916 ZNF818PQ6ZRF7 136 aa20.29■□□□□ 0.84
SMAD6-202ENST00000557916 KCTD9Q7L273 389 aa20.29■□□□□ 0.84
SMAD6-202ENST00000557916 Q8N402 240 aa20.29■□□□□ 0.84
SMAD6-202ENST00000557916 ARRDC1Q8N5I2 433 aa20.29■□□□□ 0.84
SMAD6-202ENST00000557916 FAM71E2Q8N5Q1 922 aa20.29■□□□□ 0.84
SMAD6-202ENST00000557916 C3orf56Q8N813 242 aa20.29■□□□□ 0.84
SMAD6-202ENST00000557916 BVESQ8NE79 360 aa20.29■□□□□ 0.84
SMAD6-202ENST00000557916 OR4D10Q8NGI6 311 aa20.29■□□□□ 0.84
SMAD6-202ENST00000557916 FLYWCH2Q96CP2 140 aaKnown RBP20.29■□□□□ 0.84
SMAD6-202ENST00000557916 RNF5Q99942 180 aa20.29■□□□□ 0.84
SMAD6-202ENST00000557916 RASL11BQ9BPW5 248 aa20.29■□□□□ 0.84
SMAD6-202ENST00000557916 FXYD6Q9H0Q3 95 aa20.29■□□□□ 0.84
SMAD6-202ENST00000557916 HAX1O00165 279 aa20.28■□□□□ 0.84
SMAD6-202ENST00000557916 RRASP10301 218 aa20.28■□□□□ 0.84
SMAD6-202ENST00000557916 GNRHRP30968 328 aa20.28■□□□□ 0.84
SMAD6-202ENST00000557916 RPS16P62249 146 aaKnown RBP20.28■□□□□ 0.84
SMAD6-202ENST00000557916 RPL30P62888 115 aaKnown RBP20.28■□□□□ 0.84
SMAD6-202ENST00000557916 CBX3Q13185 183 aa20.28■□□□□ 0.84
SMAD6-202ENST00000557916 EIF4EBP1Q13541 118 aaPredicted RBP20.28■□□□□ 0.84
SMAD6-202ENST00000557916 MFSD4AQ8N468 514 aa20.28■□□□□ 0.84
SMAD6-202ENST00000557916 NPBQ8NG41 125 aa20.28■□□□□ 0.84
SMAD6-202ENST00000557916 BORCS5Q969J3 196 aa20.28■□□□□ 0.84
SMAD6-202ENST00000557916 LIN7CQ9NUP9 197 aaKnown RBP20.28■□□□□ 0.84
SMAD6-202ENST00000557916 PRELID3BQ9Y3B1 194 aa20.28■□□□□ 0.84
SMAD6-202ENST00000557916 TNFSF12O43508 249 aa20.27■□□□□ 0.84
SMAD6-202ENST00000557916 PEX14O75381 377 aa20.27■□□□□ 0.84
SMAD6-202ENST00000557916 VDAC2P45880 294 aaPredicted RBP20.27■□□□□ 0.84
SMAD6-202ENST00000557916 PROK1P58294 105 aa20.27■□□□□ 0.84
SMAD6-202ENST00000557916 TCTEX1D2Q8WW35 142 aa20.27■□□□□ 0.84
SMAD6-202ENST00000557916 GPHA2Q96T91 129 aa20.27■□□□□ 0.84
SMAD6-202ENST00000557916 SERTAD4Q9NUC0 356 aa20.27■□□□□ 0.84
SMAD6-202ENST00000557916 KIAA1456Q9P272 454 aa20.27■□□□□ 0.84
SMAD6-202ENST00000557916 ANKRD20A5PA0PJZ0 165 aa20.27■□□□□ 0.83
SMAD6-202ENST00000557916 AKAIN1P0CW23 69 aa20.27■□□□□ 0.83
SMAD6-202ENST00000557916 MEF2DQ14814 521 aa20.27■□□□□ 0.83
SMAD6-202ENST00000557916 TMEM95Q3KNT9 176 aa20.27■□□□□ 0.83
SMAD6-202ENST00000557916 AADACL3Q5VUY0 350 aa20.27■□□□□ 0.83
SMAD6-202ENST00000557916 NDUFA3O95167 84 aa20.26■□□□□ 0.83
SMAD6-202ENST00000557916 LPCAT3Q6P1A2 487 aa20.26■□□□□ 0.83
SMAD6-202ENST00000557916 TSNAXQ99598 290 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms