RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 CBX3Q13185 183 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 C2orf76Q3KRA6 126 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 AKIRIN2Q53H80 203 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 PLAC9Q5JTB6 97 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 HES5Q5TA89 166 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 FLYWCH2Q96CP2 140 aaKnown RBP11.31□□□□□ -0.6
SHMT2-235ENST00000557740 RAB3CQ96E17 227 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 OR2D2Q9H210 308 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 VCX3BQ9H321 246 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 SLA2Q9H6Q3 261 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 ZNF355PQ9NSJ1 428 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 SLC35D1Q9NTN3 355 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 RAB22AQ9UL26 194 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 ERICH4A6NGS2 130 aa11.3□□□□□ -0.6
SHMT2-235ENST00000557740 PDCD5O14737 125 aa11.3□□□□□ -0.6
SHMT2-235ENST00000557740 LDLRAD4O15165 306 aa11.3□□□□□ -0.6
SHMT2-235ENST00000557740 PROP1O75360 226 aa11.3□□□□□ -0.6
SHMT2-235ENST00000557740 TRGV3P03979 118 aa11.3□□□□□ -0.6
SHMT2-235ENST00000557740 GADD45AP24522 165 aa11.3□□□□□ -0.6
SHMT2-235ENST00000557740 FXYD3Q14802 87 aa11.3□□□□□ -0.6
SHMT2-235ENST00000557740 TBCEQ15813 527 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-235ENST00000557740 ZNF367Q7RTV3 350 aa11.3□□□□□ -0.6
SHMT2-235ENST00000557740 OR6Q1Q8NGQ2 317 aa11.3□□□□□ -0.6
SHMT2-235ENST00000557740 TPSG1Q9NRR2 321 aa11.3□□□□□ -0.6
SHMT2-235ENST00000557740 BLOC1S6Q9UL45 172 aa11.3□□□□□ -0.6
SHMT2-235ENST00000557740 ARPC1BO15143 372 aaKnown RBP11.29□□□□□ -0.6
SHMT2-235ENST00000557740 CNIH1O95406 144 aa11.29□□□□□ -0.6
SHMT2-235ENST00000557740 HSPB1P04792 205 aaKnown RBP11.29□□□□□ -0.6
SHMT2-235ENST00000557740 FCGR3AP08637 254 aa11.29□□□□□ -0.6
SHMT2-235ENST00000557740 SPNP16150 400 aa11.29□□□□□ -0.6
SHMT2-235ENST00000557740 MYL9P24844 172 aa11.29□□□□□ -0.6
SHMT2-235ENST00000557740 HSPA13P48723 471 aa11.29□□□□□ -0.6
SHMT2-235ENST00000557740 LINC00205P59089 165 aa11.29□□□□□ -0.6
SHMT2-235ENST00000557740 ACSM6Q6P461 480 aa11.29□□□□□ -0.6
SHMT2-235ENST00000557740 OR10J5Q8NHC4 309 aa11.29□□□□□ -0.6
SHMT2-235ENST00000557740 OR4C12Q96R67 309 aa11.29□□□□□ -0.6
SHMT2-235ENST00000557740 CABLES2Q9BTV7 478 aa11.29□□□□□ -0.6
SHMT2-235ENST00000557740 SORL1Q92673 2214 aa11.29□□□□□ -0.6
SHMT2-235ENST00000557740 KMT2CQ8NEZ4 4911 aaKnown RBP11.28□□□□□ -0.6
SHMT2-235ENST00000557740 A0A075B6Q4 140 aa11.28□□□□□ -0.6
SHMT2-235ENST00000557740 C13orf42A0A1B0GVH6 325 aa11.28□□□□□ -0.6
SHMT2-235ENST00000557740 SNRPBP14678 240 aaKnown RBP11.28□□□□□ -0.6
SHMT2-235ENST00000557740 LGALS7P47929 136 aa11.28□□□□□ -0.6
SHMT2-235ENST00000557740 PLA2G7Q13093 441 aa11.28□□□□□ -0.6
SHMT2-235ENST00000557740 RTL8BQ17RB0 113 aa11.28□□□□□ -0.6
SHMT2-235ENST00000557740 IGSF11Q5DX21 431 aa11.28□□□□□ -0.6
SHMT2-235ENST00000557740 IZUMO2Q6UXV1 221 aa11.28□□□□□ -0.6
SHMT2-235ENST00000557740 POC5Q8NA72 575 aa11.28□□□□□ -0.6
SHMT2-235ENST00000557740 OR10R2Q8NGX6 335 aa11.28□□□□□ -0.6
SHMT2-235ENST00000557740 HARBI1Q96MB7 349 aa11.28□□□□□ -0.6
SHMT2-235ENST00000557740 GINS4Q9BRT9 223 aa11.28□□□□□ -0.6
SHMT2-235ENST00000557740 ELOVL1Q9BW60 279 aa11.28□□□□□ -0.6
SHMT2-235ENST00000557740 KCNK7Q9Y2U2 307 aa11.28□□□□□ -0.6
SHMT2-235ENST00000557740 RBM7Q9Y580 266 aaKnown RBP11.28□□□□□ -0.6
SHMT2-235ENST00000557740 DNAH9Q9NYC9 4486 aa11.28□□□□□ -0.6
SHMT2-235ENST00000557740 TRAV1-2A0A0B4J238 106 aa11.27□□□□□ -0.61
SHMT2-235ENST00000557740 IFITM5A6NNB3 132 aa11.27□□□□□ -0.61
SHMT2-235ENST00000557740 H3BUA1 57 aa11.27□□□□□ -0.61
SHMT2-235ENST00000557740 DIRAS3O95661 229 aa11.27□□□□□ -0.61
SHMT2-235ENST00000557740 GP9P14770 177 aa11.27□□□□□ -0.61
SHMT2-235ENST00000557740 HIST1H1DP16402 221 aaKnown RBP11.27□□□□□ -0.61
SHMT2-235ENST00000557740 GNB3P16520 340 aa11.27□□□□□ -0.61
SHMT2-235ENST00000557740 OR10A3P58181 314 aa11.27□□□□□ -0.61
SHMT2-235ENST00000557740 TAGLNQ01995 201 aaKnown RBP11.27□□□□□ -0.61
SHMT2-235ENST00000557740 SSX1Q16384 188 aa11.27□□□□□ -0.61
SHMT2-235ENST00000557740 MOGAT2Q3SYC2 334 aa11.27□□□□□ -0.61
SHMT2-235ENST00000557740 MAFIPQ8WZ33 124 aa11.27□□□□□ -0.61
SHMT2-235ENST00000557740 RHOVQ96L33 236 aa11.27□□□□□ -0.61
SHMT2-235ENST00000557740 CNBD2Q96M20 576 aa11.27□□□□□ -0.61
SHMT2-235ENST00000557740 NDUFB11Q9NX14 153 aa11.27□□□□□ -0.61
SHMT2-235ENST00000557740 SDHAF2Q9NX18 166 aa11.27□□□□□ -0.61
SHMT2-235ENST00000557740 TRBV6-7A0A0A0MS04 114 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 A0A0G2JLM5 398 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 METTL21EPA6NDL7 271 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 MFNGO00587 321 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 SHOXO15266 292 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 GSTT2P0CG29 244 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 GSTT2BP0CG30 244 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 RAB6AP20340 208 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 ZP3P21754 424 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 TALDO1P37837 337 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 ARFRP1Q13795 201 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 OR5T1Q8NG75 326 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 TMEM68Q96MH6 324 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 RSRP1Q9BUV0 290 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 RANGRFQ9HD47 186 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-235ENST00000557740 ZNF230Q9UIE0 474 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-235ENST00000557740 STUB1Q9UNE7 303 aa11.26□□□□□ -0.61
SHMT2-235ENST00000557740 RRASP10301 218 aa11.25□□□□□ -0.61
SHMT2-235ENST00000557740 RAB3BP20337 219 aa11.25□□□□□ -0.61
SHMT2-235ENST00000557740 PJVKQ0ZLH3 352 aa11.25□□□□□ -0.61
SHMT2-235ENST00000557740 SRSF7Q16629 238 aaKnown RBP eCLIP11.25□□□□□ -0.61
SHMT2-235ENST00000557740 OVCH2Q7RTZ1 564 aa11.25□□□□□ -0.61
SHMT2-235ENST00000557740 ANKRD13BQ86YJ7 626 aa11.25□□□□□ -0.61
SHMT2-235ENST00000557740 SBSPONQ8IVN8 264 aa11.25□□□□□ -0.61
SHMT2-235ENST00000557740 BVESQ8NE79 360 aa11.25□□□□□ -0.61
SHMT2-235ENST00000557740 C5orf30Q96GV9 206 aa11.25□□□□□ -0.61
SHMT2-235ENST00000557740 CENPOQ9BU64 300 aa11.25□□□□□ -0.61
SHMT2-235ENST00000557740 A0A0B4J203 849 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms