RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 SPDEFO95238 335 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 CD74P04233 296 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 HLA-DMAP28067 261 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 DUTP33316 252 aaKnown RBP10.92□□□□□ -0.66
SHMT2-234ENST00000557703 ECI1P42126 302 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 KIR2DS2P43631 304 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 RFX2P48378 723 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 UCP3P55916 312 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 AP3S2P59780 193 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 SRSF2Q01130 221 aaKnown RBP10.92□□□□□ -0.66
SHMT2-234ENST00000557703 RELBQ01201 579 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 RNASE10Q5GAN6 216 aaKnown RBP10.92□□□□□ -0.66
SHMT2-234ENST00000557703 FAM131AQ6UXB0 335 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 TMEM219Q86XT9 240 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 CMTM1Q8IZ96 169 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 TCTEX1D1Q8N7M0 179 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 MOB3AQ96BX8 217 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 FLYWCH2Q96CP2 140 aaKnown RBP10.92□□□□□ -0.66
SHMT2-234ENST00000557703 TSNAXQ99598 290 aaKnown RBP10.92□□□□□ -0.66
SHMT2-234ENST00000557703 KIAA1456Q9P272 454 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 RNF114Q9Y508 228 aa10.92□□□□□ -0.66
SHMT2-234ENST00000557703 MEIS3P1A6NDR6 274 aa10.91□□□□□ -0.66
SHMT2-234ENST00000557703 NCBP2LA6PVI3 153 aaKnown RBP10.91□□□□□ -0.66
SHMT2-234ENST00000557703 KCNAB3O43448 404 aa10.91□□□□□ -0.66
SHMT2-234ENST00000557703 AADACP22760 399 aa10.91□□□□□ -0.66
SHMT2-234ENST00000557703 CD24P25063 80 aa10.91□□□□□ -0.66
SHMT2-234ENST00000557703 FAM71E2Q8N5Q1 922 aa10.91□□□□□ -0.66
SHMT2-234ENST00000557703 C5orf56Q8N8D9 126 aa10.91□□□□□ -0.66
SHMT2-234ENST00000557703 ZNF383Q8NA42 475 aa10.91□□□□□ -0.66
SHMT2-234ENST00000557703 OR6Q1Q8NGQ2 317 aa10.91□□□□□ -0.66
SHMT2-234ENST00000557703 OSR1Q8TAX0 266 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-234ENST00000557703 CD300LFQ8TDQ1 290 aa10.91□□□□□ -0.66
SHMT2-234ENST00000557703 RASL11BQ9BPW5 248 aa10.91□□□□□ -0.66
SHMT2-234ENST00000557703 ZNF2Q9BSG1 426 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-234ENST00000557703 ZNF747Q9BV97 191 aa10.91□□□□□ -0.66
SHMT2-234ENST00000557703 GON7Q9BXV9 100 aa10.91□□□□□ -0.66
SHMT2-234ENST00000557703 PLSCR3Q9NRY6 295 aa10.91□□□□□ -0.66
SHMT2-234ENST00000557703 FAM212BQ9NTI7 297 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-234ENST00000557703 ZNF580Q9UK33 172 aa10.91□□□□□ -0.66
SHMT2-234ENST00000557703 IGHV3-72A0A0B4J1Y9 119 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 H7C2Y5 167 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 NBR2O15453 112 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 NDUFA3O95167 84 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 PMP2P02689 132 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 DGCR2P98153 550 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 ZNF45Q02386 682 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 CATR1Q13166 79 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 MMDQ15546 238 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 TMEM177Q53S58 311 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 FOXB2Q5VYV0 432 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 SHISA2Q6UWI4 295 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 C3orf56Q8N813 242 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 GDPD1Q8N9F7 314 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 BVESQ8NE79 360 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 DDB2Q92466 427 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 ZNF486Q96H40 463 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-234ENST00000557703 SLC5A7Q9GZV3 580 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 ZNF702PQ9H963 129 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 SLC35D1Q9NTN3 355 aa10.9□□□□□ -0.66
SHMT2-234ENST00000557703 IGKV1D-13A0A0B4J2D9 117 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 RBFOX2O43251 390 aaKnown RBP eCLIP10.89□□□□□ -0.675e-15■■■■■ 33.3
SHMT2-234ENST00000557703 IGLV2-14P01704 120 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 IGHG2P01859 326 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 CD3DP04234 171 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 AMY1AP04745 511 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 AMY2AP04746 511 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 FCER2P06734 321 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 AKAIN1P0CW23 69 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 IGKV1-13P0DP09 117 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 FAUP35544 74 aaKnown RBP10.89□□□□□ -0.67
SHMT2-234ENST00000557703 PROK1P58294 105 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 BLCAPP62952 87 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 HNF4GQ14541 408 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 SURF2Q15527 256 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-234ENST00000557703 STEAP1BQ6NZ63 245 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 SLC38A6Q8IZM9 456 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 Q8N402 240 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 Q8N9W7 124 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 POC5Q8NA72 575 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 TERB2Q8NHR7 220 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 SECTM1Q8WVN6 248 aa10.89□□□□□ -0.67
SHMT2-234ENST00000557703 THAP7Q9BT49 309 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-234ENST00000557703 ANKRD20A5PA0PJZ0 165 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 DISC1C4P0D8 188 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 GPR31O00270 319 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 CREBL2O60519 120 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-234ENST00000557703 PEX14O75381 377 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 RAB3DO95716 219 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 HLA-DRB1P01911 266 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 MDKP21741 143 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-234ENST00000557703 GNRHRP30968 328 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 VDAC2P45880 294 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-234ENST00000557703 RPS16P62249 146 aaKnown RBP10.88□□□□□ -0.67
SHMT2-234ENST00000557703 EIF4EBP1Q13541 118 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-234ENST00000557703 C5orf64Q2M2E5 130 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 ABCA11PQ4W5N1 156 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 PYDC2Q56P42 97 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 ARSJQ5FYB0 599 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-234ENST00000557703 KCTD9Q7L273 389 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 FOXRED2Q8IWF2 684 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms