RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 RANGRFQ9HD47 186 aaPredicted RBP19.33■□□□□ 0.69
SIX4-203ENST00000556952 DUXBA0A1W2PPF3 345 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 A8MV72 311 aaPredicted RBP19.32■□□□□ 0.68
SIX4-203ENST00000556952 FOSL1P15407 271 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 RPA2P15927 270 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 THBS3P49746 956 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 LOXL1Q08397 574 aaPredicted RBP19.32■□□□□ 0.68
SIX4-203ENST00000556952 HLA-DRB5Q30154 266 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 VMO1Q7Z5L0 202 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 ZNF695Q8IW36 515 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 TCTE3Q8IZS6 198 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 OR11H6Q8NGC7 330 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 SIRT7Q9NRC8 400 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 ZNRD1Q9P1U0 126 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 AMMECR1Q9Y4X0 333 aaPredicted RBP19.32■□□□□ 0.68
SIX4-203ENST00000556952 INSIG2Q9Y5U4 225 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 ABCA1O95477 2261 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 LINC00473A8K010 186 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 OR2A4O95047 310 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 GIPP09681 153 aaPredicted RBP19.32■□□□□ 0.68
SIX4-203ENST00000556952 COX7A1P24310 79 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 H2BFSP57053 126 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 TMEM268Q5VZI3 342 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 LHFPL5Q8TAF8 219 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 CD300LFQ8TDQ1 290 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 RBPMSQ93062 196 aaKnown RBP19.32■□□□□ 0.68
SIX4-203ENST00000556952 OR2A7Q96R45 310 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 GSX1Q9H4S2 264 aaPredicted RBP19.32■□□□□ 0.68
SIX4-203ENST00000556952 LPAR2Q9HBW0 351 aa19.32■□□□□ 0.68
SIX4-203ENST00000556952 B4DSR2 109 aa19.31■□□□□ 0.68
SIX4-203ENST00000556952 MSMBP08118 114 aa19.31■□□□□ 0.68
SIX4-203ENST00000556952 MMP9P14780 707 aa19.31■□□□□ 0.68
SIX4-203ENST00000556952 KIR2DS2P43631 304 aa19.31■□□□□ 0.68
SIX4-203ENST00000556952 CD300CQ08708 224 aa19.31■□□□□ 0.68
SIX4-203ENST00000556952 NCR3LG1Q68D85 454 aa19.31■□□□□ 0.68
SIX4-203ENST00000556952 C1orf229Q6ZS94 237 aaPredicted RBP19.31■□□□□ 0.68
SIX4-203ENST00000556952 PNKDQ8N490 385 aa19.31■□□□□ 0.68
SIX4-203ENST00000556952 PRELID3BQ9Y3B1 194 aa19.31■□□□□ 0.68
SIX4-203ENST00000556952 TMED3Q9Y3Q3 217 aa19.31■□□□□ 0.68
SIX4-203ENST00000556952 CCSO14618 274 aa19.3■□□□□ 0.68
SIX4-203ENST00000556952 ADAP1O75689 374 aa19.3■□□□□ 0.68
SIX4-203ENST00000556952 TOX4O94842 621 aa19.3■□□□□ 0.68
SIX4-203ENST00000556952 IFNA21P01568 189 aa19.3■□□□□ 0.68
SIX4-203ENST00000556952 DLX1P56177 255 aa19.3■□□□□ 0.68
SIX4-203ENST00000556952 GSG1LQ6UXU4 331 aa19.3■□□□□ 0.68
SIX4-203ENST00000556952 SELENOHQ8IZQ5 122 aaKnown RBP19.3■□□□□ 0.68
SIX4-203ENST00000556952 ST6GALNAC6Q969X2 333 aa19.3■□□□□ 0.68
SIX4-203ENST00000556952 FYTTD1Q96QD9 318 aaKnown RBP19.3■□□□□ 0.68
SIX4-203ENST00000556952 HOXB5P09067 269 aa19.29■□□□□ 0.68
SIX4-203ENST00000556952 RAP2BP61225 183 aa19.29■□□□□ 0.68
SIX4-203ENST00000556952 KRTAP1-1Q07627 177 aa19.29■□□□□ 0.68
SIX4-203ENST00000556952 SRSF4Q08170 494 aaKnown RBP19.29■□□□□ 0.68
SIX4-203ENST00000556952 ZNF585BQ52M93 769 aa19.29■□□□□ 0.68
SIX4-203ENST00000556952 DCAF12L2Q5VW00 463 aa19.29■□□□□ 0.68
SIX4-203ENST00000556952 SPAG16Q8N0X2 631 aa19.29■□□□□ 0.68
SIX4-203ENST00000556952 SLC35G3Q8N808 338 aa19.29■□□□□ 0.68
SIX4-203ENST00000556952 DDB2Q92466 427 aa19.29■□□□□ 0.68
SIX4-203ENST00000556952 RBFOX2O43251 390 aaKnown RBP eCLIP19.28■□□□□ 0.68
SIX4-203ENST00000556952 SIX6O95475 246 aa19.28■□□□□ 0.68
SIX4-203ENST00000556952 PAX8Q06710 450 aa19.28■□□□□ 0.68
SIX4-203ENST00000556952 HCP5Q6MZN7 132 aa19.28■□□□□ 0.68
SIX4-203ENST00000556952 DRAXINQ8NBI3 349 aaPredicted RBP19.28■□□□□ 0.68
SIX4-203ENST00000556952 OR4P4Q8NGL7 312 aa19.28■□□□□ 0.68
SIX4-203ENST00000556952 PDCD10Q9BUL8 212 aa19.28■□□□□ 0.68
SIX4-203ENST00000556952 CHIAQ9BZP6 476 aa19.28■□□□□ 0.68
SIX4-203ENST00000556952 C5orf51A6NDU8 294 aa19.27■□□□□ 0.68
SIX4-203ENST00000556952 ODF3BA8MYP8 253 aa19.27■□□□□ 0.68
SIX4-203ENST00000556952 FAM25EA8MYX2 175 aa19.27■□□□□ 0.68
SIX4-203ENST00000556952 BUB1B-PAK6H3BSN5 160 aa19.27■□□□□ 0.68
SIX4-203ENST00000556952 HOXB4P17483 251 aaPredicted RBP19.27■□□□□ 0.68
SIX4-203ENST00000556952 TAGLNQ01995 201 aaKnown RBP19.27■□□□□ 0.68
SIX4-203ENST00000556952 TMEM249Q2WGJ8 235 aa19.27■□□□□ 0.68
SIX4-203ENST00000556952 GGNBP1Q5YKI7 109 aa19.27■□□□□ 0.68
SIX4-203ENST00000556952 LYZL2Q7Z4W2 148 aa19.27■□□□□ 0.68
SIX4-203ENST00000556952 PCGF1Q9BSM1 259 aa19.27■□□□□ 0.68
SIX4-203ENST00000556952 ANK3Q12955 4377 aaKnown RBP19.27■□□□□ 0.68
SIX4-203ENST00000556952 TRAV20A0A0B4J274 112 aa19.27■□□□□ 0.67
SIX4-203ENST00000556952 TXNL1O43396 289 aa19.27■□□□□ 0.67
SIX4-203ENST00000556952 RAMP3O60896 148 aa19.27■□□□□ 0.67
SIX4-203ENST00000556952 LY6G6DO95868 133 aa19.27■□□□□ 0.67
SIX4-203ENST00000556952 ARG1P05089 322 aa19.27■□□□□ 0.67
SIX4-203ENST00000556952 VDAC1P21796 283 aa19.27■□□□□ 0.67
SIX4-203ENST00000556952 GATA3P23771 443 aa19.27■□□□□ 0.67
SIX4-203ENST00000556952 BRWD1-AS2P59051 145 aa19.27■□□□□ 0.67
SIX4-203ENST00000556952 OR2B11Q5JQS5 317 aa19.27■□□□□ 0.67
SIX4-203ENST00000556952 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.27■□□□□ 0.674e-6■■□□□ 13.3
SIX4-203ENST00000556952 LINC01356Q8N9X3 169 aa19.27■□□□□ 0.67
SIX4-203ENST00000556952 TBX15Q96SF7 602 aa19.27■□□□□ 0.67
SIX4-203ENST00000556952 C13orf42A0A1B0GVH6 325 aa19.26■□□□□ 0.67
SIX4-203ENST00000556952 ATG12O94817 140 aa19.26■□□□□ 0.67
SIX4-203ENST00000556952 HNRNPCP07910 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
SIX4-203ENST00000556952 CT45A6P0DMU7 189 aa19.26■□□□□ 0.67
SIX4-203ENST00000556952 CT45A5P0DMU8 189 aa19.26■□□□□ 0.67
SIX4-203ENST00000556952 CT45A7P0DMV0 189 aa19.26■□□□□ 0.67
SIX4-203ENST00000556952 LPAR6P43657 344 aa19.26■□□□□ 0.67
SIX4-203ENST00000556952 LINC00205P59089 165 aa19.26■□□□□ 0.67
SIX4-203ENST00000556952 CYCSP99999 105 aaKnown RBP19.26■□□□□ 0.67
SIX4-203ENST00000556952 PRB3Q04118 309 aaPredicted RBP19.26■□□□□ 0.67
SIX4-203ENST00000556952 KLRD1Q13241 179 aa19.26■□□□□ 0.67
SIX4-203ENST00000556952 TGIF2LXQ8IUE1 241 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms