RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 CNIH2Q6PI25 160 aa9.07□□□□□ -0.96
SLIRP-205ENST00000556310 ZNF383Q8NA42 475 aa9.07□□□□□ -0.96
SLIRP-205ENST00000556310 DRAXINQ8NBI3 349 aaPredicted RBP9.07□□□□□ -0.96
SLIRP-205ENST00000556310 ST6GALNAC5Q9BVH7 336 aa9.07□□□□□ -0.96
SLIRP-205ENST00000556310 MRPS26Q9BYN8 205 aaKnown RBP9.07□□□□□ -0.96
SLIRP-205ENST00000556310 AUNIPQ9H7T9 357 aa9.07□□□□□ -0.96
SLIRP-205ENST00000556310 SDHAF2Q9NX18 166 aa9.07□□□□□ -0.96
SLIRP-205ENST00000556310 ANXA10Q9UJ72 324 aa9.07□□□□□ -0.96
SLIRP-205ENST00000556310 RBM7Q9Y580 266 aaKnown RBP9.07□□□□□ -0.96
SLIRP-205ENST00000556310 IGHV7-81A0A0B4J1V7 117 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 RRHO14718 337 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 GABARAPO95166 117 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 IGKV1-16P04430 117 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 OR5H8P0DN80 308 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 VDAC1P21796 283 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 SLC6A1P30531 599 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 VBP1P61758 197 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 RPL23AP62750 156 aaKnown RBP9.06□□□□□ -0.96
SLIRP-205ENST00000556310 FOXE3Q13461 319 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 TEX38Q6PEX7 206 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 SAMD12Q8N8I0 201 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 C5orf30Q96GV9 206 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 TSNAXQ99598 290 aaKnown RBP9.06□□□□□ -0.96
SLIRP-205ENST00000556310 OR51J1Q9H342 316 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 SLC35D1Q9NTN3 355 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 ZFP57Q9NU63 452 aa9.06□□□□□ -0.96
SLIRP-205ENST00000556310 ATP6V0E1O15342 81 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 XRCC3O43542 346 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 IGHG4P01861 327 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 PF4P02776 101 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 ELANEP08246 267 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 CBX5P45973 191 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 THBS3P49746 956 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 LINC00205P59089 165 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 NDPQ00604 133 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 PLGLAQ15195 96 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 CXorf66Q5JRM2 361 aaPredicted RBP9.05□□□□□ -0.96
SLIRP-205ENST00000556310 LIN54Q6MZP7 749 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 HOGA1Q86XE5 327 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 ANKRD13BQ86YJ7 626 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 RNF152Q8N8N0 203 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 BEST4Q8NFU0 473 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 S100A16Q96FQ6 103 aaKnown RBP9.05□□□□□ -0.96
SLIRP-205ENST00000556310 ADTRPQ96IZ2 230 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 FBXL15Q9H469 300 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 PARP11Q9NR21 331 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 OR2W1Q9Y3N9 320 aa9.05□□□□□ -0.96
SLIRP-205ENST00000556310 DNAH3Q8TD57 4116 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 TUSC2O75896 110 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 SLC22A5O76082 557 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 HLA-DQB1P01920 261 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 NFYAP23511 347 aaPredicted RBP9.04□□□□□ -0.96
SLIRP-205ENST00000556310 ALDH3B2P48448 385 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 LUMP51884 338 aaPredicted RBP9.04□□□□□ -0.96
SLIRP-205ENST00000556310 CRIP2P52943 208 aaPredicted RBP9.04□□□□□ -0.96
SLIRP-205ENST00000556310 ARPC4P59998 168 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 DEFA6Q01524 100 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 CBX3Q13185 183 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 PSG5Q15238 335 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 CTF1Q16619 201 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 RTL8BQ17RB0 113 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 TMEM69Q5SWH9 247 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 ZNF660Q6AZW8 331 aaPredicted RBP9.04□□□□□ -0.96
SLIRP-205ENST00000556310 ZNF645Q8N7E2 425 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 GVQW1Q8N7I0 195 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 KLHL30-AS1Q8NEE0 82 aa9.04□□□□□ -0.96
SLIRP-205ENST00000556310 FLYWCH2Q96CP2 140 aaKnown RBP9.04□□□□□ -0.96
SLIRP-205ENST00000556310 METTL1Q9UBP6 276 aaKnown RBP9.04□□□□□ -0.96
SLIRP-205ENST00000556310 PRKDCP78527 4128 aaKnown RBP9.03□□□□□ -0.96
SLIRP-205ENST00000556310 TRAV41A0A0B4J266 112 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 NUDT19A8MXV4 375 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 G3V4G9 280 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 APOA1P02647 267 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 RRASP10301 218 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 PTHLHP12272 177 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 PSMB8P28062 276 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 PPIFP30405 207 aaKnown RBP9.03□□□□□ -0.96
SLIRP-205ENST00000556310 DUTP33316 252 aaKnown RBP9.03□□□□□ -0.96
SLIRP-205ENST00000556310 LGALS7P47929 136 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 TAS2R20P59543 309 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 RPS16P62249 146 aaKnown RBP9.03□□□□□ -0.96
SLIRP-205ENST00000556310 CX3CL1P78423 397 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 TMEM177Q53S58 311 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 ETV3LQ6ZN32 361 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 C1QL4Q86Z23 238 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 ZNF695Q8IW36 515 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 WFDC9Q8NEX5 89 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 ACOT12Q8WYK0 555 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 DDB2Q92466 427 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 SNAPC3Q92966 411 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 WDR89Q96FK6 387 aaPredicted RBP9.03□□□□□ -0.96
SLIRP-205ENST00000556310 HARBI1Q96MB7 349 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 CMTM3Q96MX0 182 aa9.03□□□□□ -0.96
SLIRP-205ENST00000556310 NAA50Q9GZZ1 169 aaKnown RBP9.03□□□□□ -0.96
SLIRP-205ENST00000556310 IGKV1D-13A0A0B4J2D9 117 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 LINC00473A8K010 186 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 G3V318 75 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 SLC25A17O43808 307 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 CA2P00918 260 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 IGLV2-23P01705 113 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms