RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 BDP1A6H8Y1 2624 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 TRBV24-1A0A075B6N3 115 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 ODAMA1E959 279 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 ZNF891A8MT65 544 aaPredicted RBP5.87□□□□□ -1.47
TDP1-213ENST00000555880 IFNL4K9M1U5 179 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 RAB29O14966 203 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 SPINT2O43291 252 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 PSPNO60542 156 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 S1PR2O95136 353 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 LY86O95711 162 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 MPV17P39210 176 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 FFAR4Q5NUL3 377 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 ZNF66Q6ZN08 573 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 ACP7Q6ZNF0 438 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 CYP2G1PQ6ZSU1 146 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 BEND4Q6ZU67 534 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 CENPVQ7Z7K6 275 aaPredicted RBP5.87□□□□□ -1.47
TDP1-213ENST00000555880 CXorf67Q86X51 503 aaPredicted RBP5.87□□□□□ -1.47
TDP1-213ENST00000555880 RPP25LQ8N5L8 163 aaKnown RBP5.87□□□□□ -1.47
TDP1-213ENST00000555880 OR10G9Q8NGN4 311 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 OR10G7Q8NGN6 311 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 MRGPRDQ8TDS7 321 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 OR5B12Q96R08 314 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 PFDN5Q99471 154 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 SLC25A22Q9H936 323 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 CLN8Q9UBY8 286 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 DMRT1Q9Y5R6 373 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 FREM2Q5SZK8 3169 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 WDFY4Q6ZS81 3184 aa5.87□□□□□ -1.47
TDP1-213ENST00000555880 TRAV20A0A0B4J274 112 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 C17orf98A8MV24 154 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 WNT9BO14905 357 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 NDUFS6O75380 124 aaKnown RBP5.86□□□□□ -1.47
TDP1-213ENST00000555880 KBTBD11O94819 623 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 PTBP3O95758 552 aaKnown RBP5.86□□□□□ -1.47
TDP1-213ENST00000555880 P0C879 139 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 GCH1P30793 250 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 TNFSF10P50591 281 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 RPP30P78346 268 aaKnown RBP5.86□□□□□ -1.47
TDP1-213ENST00000555880 ATP1A1-AS1Q5TC04 95 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 WDR25Q64LD2 544 aaPredicted RBP5.86□□□□□ -1.47
TDP1-213ENST00000555880 BTNL3Q6UXE8 466 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 ZNF826PQ6ZT77 177 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 WDR31Q8NA23 367 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 C1orf162Q8NEQ5 155 aaPredicted RBP5.86□□□□□ -1.47
TDP1-213ENST00000555880 OR10A7Q8NGE5 316 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 RPUSD4Q96CM3 377 aaKnown RBP5.86□□□□□ -1.47
TDP1-213ENST00000555880 LURAP1Q96LR2 239 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 MRPL37Q9BZE1 423 aaKnown RBP5.86□□□□□ -1.47
TDP1-213ENST00000555880 CLCF1Q9UBD9 225 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 CUL9Q8IWT3 2517 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 CACNA1DQ01668 2161 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 GTF3C1Q12789 2109 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 DOCK11Q5JSL3 2073 aa5.86□□□□□ -1.47
TDP1-213ENST00000555880 MARCH11A6NNE9 402 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 PRR33A8MZF0 331 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 H7BYZ3 331 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 MLNRO43193 412 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 SOX15O60248 233 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 IGHV2-70P01814 119 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 ADH4P08319 380 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 TRGC1P0CF51 173 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 CD82P27701 267 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 SOX8P57073 446 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 CD81P60033 236 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 RPL30P62888 115 aaKnown RBP5.85□□□□□ -1.47
TDP1-213ENST00000555880 PMP22Q01453 160 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 COL10A1Q03692 680 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 EIF4EBP1Q13541 118 aaPredicted RBP5.85□□□□□ -1.47
TDP1-213ENST00000555880 HNF4GQ14541 408 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 BSXQ3C1V8 233 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 ACOT6Q3I5F7 207 aaPredicted RBP5.85□□□□□ -1.47
TDP1-213ENST00000555880 ZNF718Q3SXZ3 478 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 Q3ZCU0 254 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 ACSM6Q6P461 480 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 WDR82Q6UXN9 313 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 SPNS3Q6ZMD2 512 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 TMPRSS7Q7RTY8 843 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 C1orf174Q8IYL3 243 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 DEFB124Q8NES8 71 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 OR10D4PQ8NGN7 298 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 OR4F5Q8NH21 305 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 FAM216AQ8WUB2 273 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 COQ2Q96H96 371 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 OR4F4Q96R69 305 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 NPCDR1Q9BY65 106 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 UFSP2Q9NUQ7 469 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 GFOD1Q9NXC2 390 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 PSG11Q9UQ72 335 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 DMDP11532 3685 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 CACNA1GO43497 2377 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 SMCO3A2RU48 225 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 OR5H1A6NKK0 313 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 C1QTNF9BB2RNN3 333 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 PPP5D1E7EU14 171 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 HMGB3O15347 200 aaKnown RBP5.85□□□□□ -1.47
TDP1-213ENST00000555880 ZG16O60844 167 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 AGFG2O95081 481 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 IGKV3-15P01624 115 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 IGHG3P01860 377 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms