RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 CABLES2Q9BTV7 478 aa19.04■□□□□ 0.64
PRKCH-216ENST00000555542 SLC35D1Q9NTN3 355 aa19.04■□□□□ 0.64
PRKCH-216ENST00000555542 SSR3Q9UNL2 185 aa19.04■□□□□ 0.64
PRKCH-216ENST00000555542 PROP1O75360 226 aa19.03■□□□□ 0.64
PRKCH-216ENST00000555542 SPDEFO95238 335 aa19.03■□□□□ 0.64
PRKCH-216ENST00000555542 CA2P00918 260 aa19.03■□□□□ 0.64
PRKCH-216ENST00000555542 ZNF616Q08AN1 781 aa19.03■□□□□ 0.64
PRKCH-216ENST00000555542 CBX3Q13185 183 aa19.03■□□□□ 0.64
PRKCH-216ENST00000555542 DCTN2Q13561 401 aaKnown RBP19.03■□□□□ 0.64
PRKCH-216ENST00000555542 ARL6IP1Q15041 203 aa19.03■□□□□ 0.64
PRKCH-216ENST00000555542 UNQ5815/PRO19632Q6UWF5 114 aa19.03■□□□□ 0.64
PRKCH-216ENST00000555542 NR2C2APQ86WQ0 139 aa19.03■□□□□ 0.64
PRKCH-216ENST00000555542 FAM103A1Q9BTL3 118 aaKnown RBP19.03■□□□□ 0.64
PRKCH-216ENST00000555542 YTHDF1Q9BYJ9 559 aaKnown RBP19.03■□□□□ 0.64
PRKCH-216ENST00000555542 TRBV6-7A0A0A0MS04 114 aa19.02■□□□□ 0.64
PRKCH-216ENST00000555542 NOTOA8MTQ0 251 aa19.02■□□□□ 0.64
PRKCH-216ENST00000555542 RAMP3O60896 148 aa19.02■□□□□ 0.64
PRKCH-216ENST00000555542 CD40LGP29965 261 aa19.02■□□□□ 0.64
PRKCH-216ENST00000555542 FGF9P31371 208 aaPredicted RBP19.02■□□□□ 0.64
PRKCH-216ENST00000555542 FHL3Q13643 280 aa19.02■□□□□ 0.64
PRKCH-216ENST00000555542 ACTBL2Q562R1 376 aa19.02■□□□□ 0.64
PRKCH-216ENST00000555542 CASTOR1Q8WTX7 329 aa19.02■□□□□ 0.64
PRKCH-216ENST00000555542 CENPOQ9BU64 300 aa19.02■□□□□ 0.64
PRKCH-216ENST00000555542 GAB2Q9UQC2 676 aa19.02■□□□□ 0.64
PRKCH-216ENST00000555542 I3L521 148 aa19.01■□□□□ 0.63
PRKCH-216ENST00000555542 SLC25A17O43808 307 aa19.01■□□□□ 0.63
PRKCH-216ENST00000555542 CRIP2P52943 208 aaPredicted RBP19.01■□□□□ 0.63
PRKCH-216ENST00000555542 GNB1P62873 340 aa19.01■□□□□ 0.63
PRKCH-216ENST00000555542 CD69Q07108 199 aa19.01■□□□□ 0.63
PRKCH-216ENST00000555542 KIAA0141Q14154 515 aaPredicted RBP19.01■□□□□ 0.63
PRKCH-216ENST00000555542 ZNF260Q3ZCT1 412 aa19.01■□□□□ 0.63
PRKCH-216ENST00000555542 TOLLIPQ9H0E2 274 aa19.01■□□□□ 0.63
PRKCH-216ENST00000555542 SDHAF2Q9NX18 166 aa19.01■□□□□ 0.63
PRKCH-216ENST00000555542 DAPK2Q9UIK4 370 aa19.01■□□□□ 0.63
PRKCH-216ENST00000555542 DIRAS3O95661 229 aa19■□□□□ 0.63
PRKCH-216ENST00000555542 ECI1P42126 302 aa19■□□□□ 0.63
PRKCH-216ENST00000555542 RUNX1Q01196 453 aa19■□□□□ 0.63
PRKCH-216ENST00000555542 PYHIN1Q6K0P9 492 aa19■□□□□ 0.63
PRKCH-216ENST00000555542 ZNF562Q6V9R5 426 aa19■□□□□ 0.63
PRKCH-216ENST00000555542 TPRA1Q86W33 373 aa19■□□□□ 0.63
PRKCH-216ENST00000555542 LFNGQ8NES3 379 aa19■□□□□ 0.63
PRKCH-216ENST00000555542 GRPEL2Q8TAA5 225 aa19■□□□□ 0.63
PRKCH-216ENST00000555542 ARPC1AQ92747 370 aa19■□□□□ 0.63
PRKCH-216ENST00000555542 RRP15Q9Y3B9 282 aaKnown RBP19■□□□□ 0.63
PRKCH-216ENST00000555542 NUBP2Q9Y5Y2 271 aa19■□□□□ 0.63
PRKCH-216ENST00000555542 SOX15O60248 233 aa18.99■□□□□ 0.63
PRKCH-216ENST00000555542 CNIH1O95406 144 aa18.99■□□□□ 0.63
PRKCH-216ENST00000555542 RTL8BQ17RB0 113 aa18.99■□□□□ 0.63
PRKCH-216ENST00000555542 CDNFQ49AH0 187 aa18.99■□□□□ 0.63
PRKCH-216ENST00000555542 C19orf54Q5BKX5 351 aa18.99■□□□□ 0.63
PRKCH-216ENST00000555542 ZNF773Q6PK81 442 aa18.99■□□□□ 0.63
PRKCH-216ENST00000555542 HARBI1Q96MB7 349 aa18.99■□□□□ 0.63
PRKCH-216ENST00000555542 MS4A10Q96PG2 267 aa18.99■□□□□ 0.63
PRKCH-216ENST00000555542 ALX4Q9H161 411 aaPredicted RBP18.99■□□□□ 0.63
PRKCH-216ENST00000555542 TPSG1Q9NRR2 321 aa18.99■□□□□ 0.63
PRKCH-216ENST00000555542 EGR2P11161 476 aaPredicted RBP18.98■□□□□ 0.63
PRKCH-216ENST00000555542 TPPP2P59282 170 aa18.98■□□□□ 0.63
PRKCH-216ENST00000555542 FXYD3Q14802 87 aa18.98■□□□□ 0.63
PRKCH-216ENST00000555542 SRSF7Q16629 238 aaKnown RBP eCLIP18.98■□□□□ 0.63
PRKCH-216ENST00000555542 AKIRIN2Q53H80 203 aa18.98■□□□□ 0.63
PRKCH-216ENST00000555542 ST6GALNAC5Q9BVH7 336 aa18.98■□□□□ 0.63
PRKCH-216ENST00000555542 OR51E2Q9H255 320 aa18.98■□□□□ 0.63
PRKCH-216ENST00000555542 ZNF355PQ9NSJ1 428 aa18.98■□□□□ 0.63
PRKCH-216ENST00000555542 ELF5Q9UKW6 265 aaPredicted RBP18.98■□□□□ 0.63
PRKCH-216ENST00000555542 SHOXO15266 292 aa18.97■□□□□ 0.63
PRKCH-216ENST00000555542 SCGNO76038 276 aa18.97■□□□□ 0.63
PRKCH-216ENST00000555542 SNRPBP14678 240 aaKnown RBP18.97■□□□□ 0.63
PRKCH-216ENST00000555542 DTYMKP23919 212 aa18.97■□□□□ 0.63
PRKCH-216ENST00000555542 MXD1Q05195 221 aa18.97■□□□□ 0.63
PRKCH-216ENST00000555542 SFXN4Q6P4A7 337 aa18.97■□□□□ 0.63
PRKCH-216ENST00000555542 BVESQ8NE79 360 aa18.97■□□□□ 0.63
PRKCH-216ENST00000555542 LOC100506127A0A0U1RQW1 187 aa18.96■□□□□ 0.63
PRKCH-216ENST00000555542 IGHV3-11P01762 117 aa18.96■□□□□ 0.63
PRKCH-216ENST00000555542 LGALS1P09382 135 aaKnown RBP18.96■□□□□ 0.63
PRKCH-216ENST00000555542 LGALS7P47929 136 aa18.96■□□□□ 0.63
PRKCH-216ENST00000555542 GNG2P59768 71 aa18.96■□□□□ 0.63
PRKCH-216ENST00000555542 TAGLNQ01995 201 aaKnown RBP18.96■□□□□ 0.63
PRKCH-216ENST00000555542 NEDD8Q15843 81 aa18.96■□□□□ 0.63
PRKCH-216ENST00000555542 ASPHD1Q5U4P2 390 aa18.96■□□□□ 0.63
PRKCH-216ENST00000555542 HACD4Q5VWC8 232 aa18.96■□□□□ 0.63
PRKCH-216ENST00000555542 Q6ZS49 121 aa18.96■□□□□ 0.63
PRKCH-216ENST00000555542 H1FOOQ8IZA3 346 aaPredicted RBP18.96■□□□□ 0.63
PRKCH-216ENST00000555542 LGALS14Q8TCE9 139 aa18.96■□□□□ 0.63
PRKCH-216ENST00000555542 PRR25Q96S07 402 aa18.96■□□□□ 0.63
PRKCH-216ENST00000555542 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.96■□□□□ 0.63
PRKCH-216ENST00000555542 IGKV1D-8A0A087WSZ0 117 aa18.95■□□□□ 0.62
PRKCH-216ENST00000555542 LINC01619G3V211 115 aa18.95■□□□□ 0.62
PRKCH-216ENST00000555542 J3QRK9 145 aa18.95■□□□□ 0.62
PRKCH-216ENST00000555542 OVOL1O14753 267 aa18.95■□□□□ 0.62
PRKCH-216ENST00000555542 RRASP10301 218 aa18.95■□□□□ 0.62
PRKCH-216ENST00000555542 SDC2P34741 201 aa18.95■□□□□ 0.62
PRKCH-216ENST00000555542 PITPNAQ00169 270 aa18.95■□□□□ 0.62
PRKCH-216ENST00000555542 DCUN1D4Q92564 292 aa18.95■□□□□ 0.62
PRKCH-216ENST00000555542 ADTRPQ96IZ2 230 aa18.95■□□□□ 0.62
PRKCH-216ENST00000555542 SLA2Q9H6Q3 261 aa18.95■□□□□ 0.62
PRKCH-216ENST00000555542 SCOCQ9UIL1 159 aa18.95■□□□□ 0.62
PRKCH-216ENST00000555542 TMEM235A6NFC5 223 aa18.94■□□□□ 0.62
PRKCH-216ENST00000555542 LY86O95711 162 aa18.94■□□□□ 0.62
PRKCH-216ENST00000555542 TRGV3P03979 118 aa18.94■□□□□ 0.62
PRKCH-216ENST00000555542 INSL3P51460 131 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms