RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 CCR6P51684 374 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 LINC00205P59089 165 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 RND3P61587 244 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 BAMBIQ13145 260 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 EBI3Q14213 229 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 LRRC75BQ2VPJ9 315 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 SIGLECL1Q8N7X8 197 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 ZDHHC22Q8N966 263 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 ZNF383Q8NA42 475 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 DDB2Q92466 427 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 MRPL20Q9BYC9 149 aaKnown RBP8.2□□□□□ -1.1
SYNE2-215ENST00000554997 DPAGT1Q9H3H5 408 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 COPZ2Q9P299 210 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 NIPBLQ6KC79 2804 aaeCLIP8.2□□□□□ -1.1
SYNE2-215ENST00000554997 ANK3Q12955 4377 aaKnown RBP8.19□□□□□ -1.1
SYNE2-215ENST00000554997 A0A0A6YYJ9 748 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 FAM240BA0A1B0GVZ2 78 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 LINC00473A8K010 186 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 RNF212BA8MTL3 300 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 H0YJW9 148 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 MPPED1O15442 326 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 TNFSF12O43508 249 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 VENTXO95231 258 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 TCRBP04435 133 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 RRASP10301 218 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 PIGPP57054 158 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 RPL30P62888 115 aaKnown RBP8.19□□□□□ -1.1
SYNE2-215ENST00000554997 DCTN2Q13561 401 aaKnown RBP8.19□□□□□ -1.1
SYNE2-215ENST00000554997 RBMS2Q15434 407 aaKnown RBP8.19□□□□□ -1.1
SYNE2-215ENST00000554997 ABCA11PQ4W5N1 156 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 PHLDA2Q53GA4 152 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 GLDNQ6ZMI3 551 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-215ENST00000554997 KCTD9Q7L273 389 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 TMEM86BQ8N661 226 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 TCTEX1D1Q8N7M0 179 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 POC5Q8NA72 575 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 DUSP18Q8NEJ0 188 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 OR5R1Q8NH85 324 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 ZNF418Q8TF45 676 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-215ENST00000554997 SSMEM1Q8WWF3 244 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 RNF5Q99942 180 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 C5orf66Q9H5L9 145 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 SLC2A9Q9NRM0 540 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 C14orf166Q9Y224 244 aaKnown RBP8.19□□□□□ -1.1
SYNE2-215ENST00000554997 VSIG4Q9Y279 399 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 PRELID3BQ9Y3B1 194 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 POMT1Q9Y6A1 747 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 ZFHX3Q15911 3703 aa8.19□□□□□ -1.1
SYNE2-215ENST00000554997 H3BUX3 64 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 CLDN34H7C241 214 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 HOXA3O43365 443 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-215ENST00000554997 MOSP00540 346 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 SNRNP70P08621 437 aaKnown RBP8.18□□□□□ -1.1
SYNE2-215ENST00000554997 PI3P19957 117 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 CD24P25063 80 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 F2RP25116 425 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 BRWD1-AS2P59051 145 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 CATR1Q13166 79 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 TBC1D26Q86UD7 250 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 PDPNQ86YL7 162 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 CCDC71LQ8N9Z2 235 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 OR2T10Q8NGZ9 312 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 CD300LFQ8TDQ1 290 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 CAPSLQ8WWF8 208 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 EAF1Q96JC9 268 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-215ENST00000554997 GPHA2Q96T91 129 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 ALX4Q9H161 411 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-215ENST00000554997 FAM212BQ9NTI7 297 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-215ENST00000554997 PITPNC1Q9UKF7 332 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 WASHC3Q9Y3C0 194 aa8.18□□□□□ -1.1
SYNE2-215ENST00000554997 FN1P02751 2386 aaKnown RBP8.18□□□□□ -1.1
SYNE2-215ENST00000554997 SONP18583 2426 aaKnown RBP8.17□□□□□ -1.1
SYNE2-215ENST00000554997 IGHV3-72A0A0B4J1Y9 119 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 C3orf85A0A1B0GTC6 90 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 A6NDX4 124 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 H7C2Y5 167 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 RBFOX2O43251 390 aaKnown RBP eCLIP8.17□□□□□ -1.1
SYNE2-215ENST00000554997 B3GALNT1O75752 331 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 IGKV1D-33P01593 117 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 IGKV1-33P01594 117 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 IGHV4-59P01825 116 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 APOA2P02652 100 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 AKR1C4P17516 323 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 KIR2DS2P43631 304 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 LGALS7P47929 136 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 HILS1P60008 231 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 DHODHQ02127 395 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 SLC9A3R2Q15599 337 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 RTL8BQ17RB0 113 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 TMEM128Q5BJH2 165 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 CCBE1Q6UXH8 406 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-215ENST00000554997 NRARPQ7Z6K4 114 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 SLC25A42Q86VD7 318 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 SPAG16Q8N0X2 631 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 ADAD2Q8NCV1 583 aaKnown RBP8.17□□□□□ -1.1
SYNE2-215ENST00000554997 OR8H1Q8NGG4 311 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 OR4C13Q8NGP0 309 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 TCTEX1D2Q8WW35 142 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 FLYWCH2Q96CP2 140 aaKnown RBP8.17□□□□□ -1.1
SYNE2-215ENST00000554997 RITA1Q96K30 269 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms