RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 PRELID3BQ9Y3B1 194 aa13.22□□□□□ -0.29
SPTLC2-203ENST00000554901 RNF212BA8MTL3 300 aa13.21□□□□□ -0.29
SPTLC2-203ENST00000554901 H0YJW9 148 aa13.21□□□□□ -0.29
SPTLC2-203ENST00000554901 APOA2P02652 100 aa13.21□□□□□ -0.29
SPTLC2-203ENST00000554901 CTSDP07339 412 aaPredicted RBP13.21□□□□□ -0.29
SPTLC2-203ENST00000554901 RRASP10301 218 aa13.21□□□□□ -0.29
SPTLC2-203ENST00000554901 PAX6P26367 422 aa13.21□□□□□ -0.29
SPTLC2-203ENST00000554901 RND3P61587 244 aa13.21□□□□□ -0.29
SPTLC2-203ENST00000554901 RBMS2Q15434 407 aaKnown RBP13.21□□□□□ -0.29
SPTLC2-203ENST00000554901 MZT2BQ6NZ67 158 aa13.21□□□□□ -0.29
SPTLC2-203ENST00000554901 ZDHHC22Q8N966 263 aa13.21□□□□□ -0.29
SPTLC2-203ENST00000554901 MARCH1Q8TCQ1 289 aa13.21□□□□□ -0.29
SPTLC2-203ENST00000554901 GPR132Q9UNW8 380 aa13.21□□□□□ -0.29
SPTLC2-203ENST00000554901 LINC00854A0A1B0GVQ3 168 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 H3BUX3 64 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 HOXA3O43365 443 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 TCF21O43680 179 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 VENTXO95231 258 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 IGHV4-59P01825 116 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 DEFA1P59665 94 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 DEFA3P59666 94 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 C16orf87Q6PH81 154 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 KCTD9Q7L273 389 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 PDPNQ86YL7 162 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 TCTEX1D1Q8N7M0 179 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 ZNF383Q8NA42 475 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 OR2T10Q8NGZ9 312 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 DDB2Q92466 427 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 RNF5Q99942 180 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 SLC2A9Q9NRM0 540 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 VPREB3Q9UKI3 123 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 C14orf166Q9Y224 244 aaKnown RBP13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 TCF19Q9Y242 345 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 WASHC3Q9Y3C0 194 aa13.2□□□□□ -0.3
SPTLC2-203ENST00000554901 PGLYRP1O75594 196 aaPredicted RBP13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 SNRNP70P08621 437 aaKnown RBP13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 BTCP35070 178 aa13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 KIR2DS2P43631 304 aa13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 IFITM3Q01628 133 aa13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 CBX3Q13185 183 aa13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 RTL8BQ17RB0 113 aa13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 ABCA11PQ4W5N1 156 aa13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 DHRS7BQ6IAN0 325 aaPredicted RBP13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 C16orf82Q7Z2V1 217 aa13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 CCDC71LQ8N9Z2 235 aa13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 DRAXINQ8NBI3 349 aaPredicted RBP13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 CD300LFQ8TDQ1 290 aa13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 CAPSLQ8WWF8 208 aa13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 RAB18Q9NP72 206 aa13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 FAM212BQ9NTI7 297 aaPredicted RBP13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 COPZ2Q9P299 210 aa13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 TBC1D24Q9ULP9 559 aa13.19□□□□□ -0.3
SPTLC2-203ENST00000554901 DNAJC9-AS1A6NH13 148 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 LINC00473A8K010 186 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 RBFOX2O43251 390 aaKnown RBP eCLIP13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 NDUFB6O95139 128 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 MOSP00540 346 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 SLC6A1P30531 599 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 SLC9A3R2Q15599 337 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 POC5Q8NA72 575 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 OR8H1Q8NGG4 311 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 TCTEX1D2Q8WW35 142 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 SLC35D1Q9NTN3 355 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 LIN7CQ9NUP9 197 aaKnown RBP13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 IGHV3-72A0A0B4J1Y9 119 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 A6NDX4 124 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 H7C2Y5 167 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 B3GALNT1O75752 331 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 IGKV1D-33P01593 117 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 IGKV1-33P01594 117 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 F2RP25116 425 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 PIGPP57054 158 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 RPL15P61313 204 aaKnown RBP13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 RPL30P62888 115 aaKnown RBP13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 HES1Q14469 280 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 PHLDA2Q53GA4 152 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 GLDNQ6ZMI3 551 aaPredicted RBP13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 LURAP1LQ8IV03 231 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 OR4C13Q8NGP0 309 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 EAF1Q96JC9 268 aaPredicted RBP13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 RTBDNQ9BSG5 229 aaPredicted RBP13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 C5orf66Q9H5L9 145 aa13.18□□□□□ -0.3
SPTLC2-203ENST00000554901 SETD2Q9BYW2 2564 aaPredicted RBP13.17□□□□□ -0.3
SPTLC2-203ENST00000554901 MPPED1O15442 326 aa13.17□□□□□ -0.3
SPTLC2-203ENST00000554901 TNFSF12O43508 249 aa13.17□□□□□ -0.3
SPTLC2-203ENST00000554901 RLN1P04808 185 aa13.17□□□□□ -0.3
SPTLC2-203ENST00000554901 RNASE1P07998 156 aaKnown RBP13.17□□□□□ -0.3
SPTLC2-203ENST00000554901 CCR6P51684 374 aa13.17□□□□□ -0.3
SPTLC2-203ENST00000554901 Q8N6K4 173 aa13.17□□□□□ -0.3
SPTLC2-203ENST00000554901 OR4S2Q8NH73 311 aa13.17□□□□□ -0.3
SPTLC2-203ENST00000554901 FLYWCH2Q96CP2 140 aaKnown RBP13.17□□□□□ -0.3
SPTLC2-203ENST00000554901 RBM14Q96PK6 669 aaKnown RBP13.17□□□□□ -0.3
SPTLC2-203ENST00000554901 ESM1Q9NQ30 184 aa13.17□□□□□ -0.3
SPTLC2-203ENST00000554901 VSIG4Q9Y279 399 aa13.17□□□□□ -0.3
SPTLC2-203ENST00000554901 M0QZK8 103 aa13.16□□□□□ -0.3
SPTLC2-203ENST00000554901 OR2F2O95006 317 aa13.16□□□□□ -0.3
SPTLC2-203ENST00000554901 TMEM11P17152 192 aa13.16□□□□□ -0.3
SPTLC2-203ENST00000554901 CD24P25063 80 aa13.16□□□□□ -0.3
SPTLC2-203ENST00000554901 LGALS7P47929 136 aa13.16□□□□□ -0.3
SPTLC2-203ENST00000554901 LINC00205P59089 165 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms