RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 TMEM187Q14656 261 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 RTL8BQ17RB0 113 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 TPTE2P1Q5T6R2 138 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 LIAT1Q6ZQX7 453 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 OR4S2Q8NH73 311 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 IL22RA2Q969J5 263 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 MALSU1Q96EH3 234 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 TP53RKQ96S44 253 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 MED28Q9H204 178 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 hCG_2014768A0A024R1R8 64 aa11.65□□□□□ -0.54
SHOX2-206ENST00000554685 CENPVL3A0A0U1RRI6 287 aa11.65□□□□□ -0.54
SHOX2-206ENST00000554685 LY6LH3BQJ8 138 aa11.65□□□□□ -0.54
SHOX2-206ENST00000554685 MC5RP33032 325 aa11.65□□□□□ -0.54
SHOX2-206ENST00000554685 RAB13P51153 203 aa11.65□□□□□ -0.54
SHOX2-206ENST00000554685 PRB3Q04118 309 aaPredicted RBP11.65□□□□□ -0.54
SHOX2-206ENST00000554685 DHRS7BQ6IAN0 325 aaPredicted RBP11.65□□□□□ -0.54
SHOX2-206ENST00000554685 ZNF695Q8IW36 515 aa11.65□□□□□ -0.54
SHOX2-206ENST00000554685 SPAG16Q8N0X2 631 aa11.65□□□□□ -0.54
SHOX2-206ENST00000554685 CIARTQ8N365 385 aaPredicted RBP11.65□□□□□ -0.54
SHOX2-206ENST00000554685 LRTM2Q8N967 370 aa11.65□□□□□ -0.54
SHOX2-206ENST00000554685 NABP2Q9BQ15 211 aa11.65□□□□□ -0.54
SHOX2-206ENST00000554685 MRPL20Q9BYC9 149 aaKnown RBP11.65□□□□□ -0.54
SHOX2-206ENST00000554685 A0A1W2PRD5 423 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 A0A1W2PRF3 423 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 A0A1W2PRM7 423 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 LINC00473A8K010 186 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 CD5LO43866 347 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 FCGR3BO75015 233 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 TRAPPC2P0DI81 140 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 TRAPPC2BP0DI82 140 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 CT45A6P0DMU7 189 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 CT45A5P0DMU8 189 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 CT45A7P0DMV0 189 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 RRAS2P62070 204 aaPredicted RBP11.64□□□□□ -0.55
SHOX2-206ENST00000554685 RPL30P62888 115 aaKnown RBP11.64□□□□□ -0.55
SHOX2-206ENST00000554685 SP6Q3SY56 376 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 LIN54Q6MZP7 749 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 PDPNQ86YL7 162 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 PDZD9Q8IXQ8 264 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 DRAXINQ8NBI3 349 aaPredicted RBP11.64□□□□□ -0.55
SHOX2-206ENST00000554685 UXS1Q8NBZ7 420 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 NANPQ8TBE9 248 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 GLYATL2Q8WU03 294 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 DDB2Q92466 427 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 RBPMSQ93062 196 aaKnown RBP11.64□□□□□ -0.55
SHOX2-206ENST00000554685 TMEM56Q96MV1 263 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 GPHA2Q96T91 129 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 AIFM2Q9BRQ8 373 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 SLC35D1Q9NTN3 355 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 COMMD9Q9P000 198 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 TMEM56-RWDD3S4R434 201 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 ITPR2Q14571 2701 aa11.64□□□□□ -0.55
SHOX2-206ENST00000554685 NBPF19A0A087WUL8 3843 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 IGHV1-3A0A0C4DH29 117 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 A0A1B0GVG6 124 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 CDS2O95674 445 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 HPRT1P00492 218 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 IFNA21P01568 189 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 SAA4P35542 130 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 REG1BP48304 166 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 BCAP31P51572 246 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 ANKRD55Q3KP44 614 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 C1orf229Q6ZS94 237 aaPredicted RBP11.63□□□□□ -0.55
SHOX2-206ENST00000554685 MOB3BQ86TA1 216 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 CADM3Q8N126 398 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 ZNF383Q8NA42 475 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 OR5AN1Q8NGI8 311 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 C18orf12Q96KH6 178 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 PLEKHA2Q9HB19 425 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 RAB18Q9NP72 206 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 WASHC3Q9Y3C0 194 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 ARHGAP32A7KAX9 2087 aa11.63□□□□□ -0.55
SHOX2-206ENST00000554685 CR1P17927 2039 aa11.62□□□□□ -0.55
SHOX2-206ENST00000554685 HMX3A6NHT5 357 aa11.62□□□□□ -0.55
SHOX2-206ENST00000554685 VGLL3A8MV65 326 aa11.62□□□□□ -0.55
SHOX2-206ENST00000554685 H0YJW9 148 aa11.62□□□□□ -0.55
SHOX2-206ENST00000554685 H7C2Y5 167 aa11.62□□□□□ -0.55
SHOX2-206ENST00000554685 LPAR6P43657 344 aa11.62□□□□□ -0.55
SHOX2-206ENST00000554685 OR2B11Q5JQS5 317 aa11.62□□□□□ -0.55
SHOX2-206ENST00000554685 TMEM268Q5VZI3 342 aa11.62□□□□□ -0.55
SHOX2-206ENST00000554685 SPNS3Q6ZMD2 512 aa11.62□□□□□ -0.55
SHOX2-206ENST00000554685 LHFPL4Q7Z7J7 247 aa11.62□□□□□ -0.55
SHOX2-206ENST00000554685 RNASE11Q8TAA1 199 aaKnown RBP11.62□□□□□ -0.55
SHOX2-206ENST00000554685 CHAC2Q8WUX2 184 aa11.62□□□□□ -0.55
SHOX2-206ENST00000554685 TMED3Q9Y3Q3 217 aa11.62□□□□□ -0.55
SHOX2-206ENST00000554685 HILPDAQ9Y5L2 63 aa11.62□□□□□ -0.55
SHOX2-206ENST00000554685 ASH1LQ9NR48 2969 aaKnown RBP11.62□□□□□ -0.55
SHOX2-206ENST00000554685 ABCA2Q9BZC7 2435 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 CSMD2Q7Z408 3487 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 A0A1W2PPI3 338 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 DBX1A6NMT0 343 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 HRASP01112 189 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 SULT1A3P0DMM9 295 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 SULT1A4P0DMN0 295 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 IGHV4-38-2P0DP08 117 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 CD1BP29016 333 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 BRS3P32247 399 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 ERVK-16P61578 105 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 DIAPH2-AS1Q14236 149 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 ZNF585BQ52M93 769 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms