RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 NCS1P62166 190 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 EBI3Q14213 229 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 HABP2Q14520 560 aaPredicted RBP6.64□□□□□ -1.35
PSEN1-209ENST00000553855 ZNF260Q3ZCT1 412 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 IGSF11Q5DX21 431 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 CNIH2Q6PI25 160 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 ZNF833PQ6ZTB9 187 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 C5orf24Q7Z6I8 188 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 SLC35E3Q7Z769 313 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 C5orf56Q8N8D9 126 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.64□□□□□ -1.35
PSEN1-209ENST00000553855 OR8U1Q8NH10 309 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 CHPT1Q8WUD6 406 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 NUDCD2Q8WVJ2 157 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 ABHD14BQ96IU4 210 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 CMTM3Q96MX0 182 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 NABP2Q9BQ15 211 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 CABLES2Q9BTV7 478 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 MRPL20Q9BYC9 149 aaKnown RBP6.64□□□□□ -1.35
PSEN1-209ENST00000553855 ABCG5Q9H222 651 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 IFI27L2Q9H2X8 130 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 LIN7CQ9NUP9 197 aaKnown RBP6.64□□□□□ -1.35
PSEN1-209ENST00000553855 RNF150Q9ULK6 438 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 TRBV6-7A0A0A0MS04 114 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 M0R1X1 148 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 XRCC3O43542 346 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 ZNF182P17025 639 aaPredicted RBP6.63□□□□□ -1.35
PSEN1-209ENST00000553855 PRSS3P35030 304 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 RPL5P46777 297 aaKnown RBP6.63□□□□□ -1.35
PSEN1-209ENST00000553855 LUMP51884 338 aaPredicted RBP6.63□□□□□ -1.35
PSEN1-209ENST00000553855 RPL39P5Q59GN2 51 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 KHDC1LQ5JSQ8 128 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 FAM131AQ6UXB0 335 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 CLVS1Q8IUQ0 354 aaPredicted RBP6.63□□□□□ -1.35
PSEN1-209ENST00000553855 C11orf44Q8N8P7 122 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 BEST4Q8NFU0 473 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 OR5AU1Q8NGC0 362 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 RAB2BQ8WUD1 216 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 C15orf40Q8WUR7 153 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 SLC25A38Q96DW6 304 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 ADTRPQ96IZ2 230 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 CYYR1Q96J86 154 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 TSNAXQ99598 290 aaKnown RBP6.63□□□□□ -1.35
PSEN1-209ENST00000553855 BCL7BQ9BQE9 202 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 OR2D2Q9H210 308 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 AUNIPQ9H7T9 357 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 TMEM140Q9NV12 185 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 NECAP2Q9NVZ3 263 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 ANXA10Q9UJ72 324 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 MRPS7Q9Y2R9 242 aaKnown RBP6.63□□□□□ -1.35
PSEN1-209ENST00000553855 WASHC3Q9Y3C0 194 aa6.63□□□□□ -1.35
PSEN1-209ENST00000553855 IGKV1-6A0A0C4DH72 117 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 TCRBV4S1A1TA0A5B7 111 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 PSMB11A5LHX3 300 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 CCDC160A6NGH7 325 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 SH2D7A6NKC9 451 aaPredicted RBP6.62□□□□□ -1.35
PSEN1-209ENST00000553855 ZNF736B4DX44 427 aaPredicted RBP6.62□□□□□ -1.35
PSEN1-209ENST00000553855 J3QRK9 145 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 AP4M1O00189 453 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 NBR2O15453 112 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 RGS5O15539 181 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 PAX4O43316 350 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 APOA1P02647 267 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 OR5H8P0DN80 308 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 RRASP10301 218 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 VDAC1P21796 283 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 ALDH3B2P48448 385 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 THBS3P49746 956 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 TMBIM6P55061 237 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 TAS2R20P59543 309 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 ACTBP60709 375 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 RPS16P62249 146 aaKnown RBP6.62□□□□□ -1.35
PSEN1-209ENST00000553855 SRSF4Q08170 494 aaKnown RBP6.62□□□□□ -1.35
PSEN1-209ENST00000553855 RTL8BQ17RB0 113 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 NSUN5P1Q3KNT7 163 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 PRR31Q5SQ13 230 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 Q6ZPA2 131 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 HOGA1Q86XE5 327 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 PDPNQ86YL7 162 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 ODF3L1Q8IXM7 274 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 COMMD1Q8N668 190 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 RNF152Q8N8N0 203 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 OR4F17Q8NGA8 305 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 BORCS5Q969J3 196 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 FLYWCH2Q96CP2 140 aaKnown RBP6.62□□□□□ -1.35
PSEN1-209ENST00000553855 OR4F4Q96R69 305 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 RNF5Q99942 180 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 TOLLIPQ9H0E2 274 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 SLC35D1Q9NTN3 355 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 SERTAD4Q9NUC0 356 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 ZNF107Q9UII5 783 aaPredicted RBP6.62□□□□□ -1.35
PSEN1-209ENST00000553855 ELF5Q9UKW6 265 aaPredicted RBP6.62□□□□□ -1.35
PSEN1-209ENST00000553855 GAB2Q9UQC2 676 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 PRELID3BQ9Y3B1 194 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 OR2W1Q9Y3N9 320 aa6.62□□□□□ -1.35
PSEN1-209ENST00000553855 IGHG2P01859 326 aa6.61□□□□□ -1.35
PSEN1-209ENST00000553855 CT45A6P0DMU7 189 aa6.61□□□□□ -1.35
PSEN1-209ENST00000553855 CT45A5P0DMU8 189 aa6.61□□□□□ -1.35
PSEN1-209ENST00000553855 CT45A7P0DMV0 189 aa6.61□□□□□ -1.35
PSEN1-209ENST00000553855 LGALS7P47929 136 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms