RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 SECTM1Q8WVN6 248 aa18.04■□□□□ 0.48
TDP1-206ENST00000553569 RSL24D1Q9UHA3 163 aaKnown RBP18.04■□□□□ 0.48
TDP1-206ENST00000553569 ZNF107Q9UII5 783 aaPredicted RBP18.04■□□□□ 0.48
TDP1-206ENST00000553569 M0QZ24 198 aa18.03■□□□□ 0.48
TDP1-206ENST00000553569 PPYP01298 95 aa18.03■□□□□ 0.48
TDP1-206ENST00000553569 NAT1P18440 290 aa18.03■□□□□ 0.48
TDP1-206ENST00000553569 HLA-DMAP28067 261 aa18.03■□□□□ 0.48
TDP1-206ENST00000553569 DUTP33316 252 aaKnown RBP18.03■□□□□ 0.48
TDP1-206ENST00000553569 RFX2P48378 723 aa18.03■□□□□ 0.48
TDP1-206ENST00000553569 TAS2R46P59540 309 aa18.03■□□□□ 0.48
TDP1-206ENST00000553569 RPS16P62249 146 aaKnown RBP18.03■□□□□ 0.48
TDP1-206ENST00000553569 PLGLAQ15195 96 aa18.03■□□□□ 0.48
TDP1-206ENST00000553569 C5orf64Q2M2E5 130 aa18.03■□□□□ 0.48
TDP1-206ENST00000553569 BVESQ8NE79 360 aa18.03■□□□□ 0.48
TDP1-206ENST00000553569 NPBQ8NG41 125 aa18.03■□□□□ 0.48
TDP1-206ENST00000553569 DCUN1D5Q9BTE7 237 aa18.03■□□□□ 0.48
TDP1-206ENST00000553569 SLIRPQ9GZT3 109 aaKnown RBP18.03■□□□□ 0.48
TDP1-206ENST00000553569 FBXL15Q9H469 300 aa18.03■□□□□ 0.48
TDP1-206ENST00000553569 RBMX2Q9Y388 322 aaKnown RBP18.03■□□□□ 0.48
TDP1-206ENST00000553569 SULT1C2O00338 296 aa18.02■□□□□ 0.48
TDP1-206ENST00000553569 KCNAB3O43448 404 aa18.02■□□□□ 0.48
TDP1-206ENST00000553569 SLC22A5O76082 557 aa18.02■□□□□ 0.48
TDP1-206ENST00000553569 NDUFA3O95167 84 aa18.02■□□□□ 0.48
TDP1-206ENST00000553569 RCVRNP35243 200 aa18.02■□□□□ 0.48
TDP1-206ENST00000553569 CBX3Q13185 183 aa18.02■□□□□ 0.48
TDP1-206ENST00000553569 RTL8BQ17RB0 113 aa18.02■□□□□ 0.48
TDP1-206ENST00000553569 FLYWCH2Q96CP2 140 aaKnown RBP18.02■□□□□ 0.48
TDP1-206ENST00000553569 ADTRPQ96IZ2 230 aa18.02■□□□□ 0.48
TDP1-206ENST00000553569 PSMB11A5LHX3 300 aa18.01■□□□□ 0.47
TDP1-206ENST00000553569 LINC00473A8K010 186 aa18.01■□□□□ 0.47
TDP1-206ENST00000553569 AP4M1O00189 453 aa18.01■□□□□ 0.47
TDP1-206ENST00000553569 RRHO14718 337 aa18.01■□□□□ 0.47
TDP1-206ENST00000553569 IGLV2-14P01704 120 aa18.01■□□□□ 0.47
TDP1-206ENST00000553569 HRH1P35367 487 aa18.01■□□□□ 0.47
TDP1-206ENST00000553569 HERV-K104P61576 105 aa18.01■□□□□ 0.47
TDP1-206ENST00000553569 ZNF329Q86UD4 541 aa18.01■□□□□ 0.47
TDP1-206ENST00000553569 TMEM17Q86X19 198 aa18.01■□□□□ 0.47
TDP1-206ENST00000553569 MCFD2Q8NI22 146 aa18.01■□□□□ 0.47
TDP1-206ENST00000553569 ABHD1Q96SE0 405 aa18.01■□□□□ 0.47
TDP1-206ENST00000553569 TSNAXQ99598 290 aaKnown RBP18.01■□□□□ 0.47
TDP1-206ENST00000553569 CITED2Q99967 270 aaPredicted RBP18.01■□□□□ 0.47
TDP1-206ENST00000553569 SLC5A7Q9GZV3 580 aa18.01■□□□□ 0.47
TDP1-206ENST00000553569 DYRK1AQ13627 763 aa18■□□□□ 0.47
TDP1-206ENST00000553569 C2orf68Q2NKX9 166 aa18■□□□□ 0.47
TDP1-206ENST00000553569 NSUN5P1Q3KNT7 163 aa18■□□□□ 0.47
TDP1-206ENST00000553569 OR2B11Q5JQS5 317 aa18■□□□□ 0.47
TDP1-206ENST00000553569 PRR31Q5SQ13 230 aa18■□□□□ 0.47
TDP1-206ENST00000553569 KCTD9Q7L273 389 aa18■□□□□ 0.47
TDP1-206ENST00000553569 OVCH2Q7RTZ1 564 aa18■□□□□ 0.47
TDP1-206ENST00000553569 LYSMD2Q8IV50 215 aa18■□□□□ 0.47
TDP1-206ENST00000553569 STPG2Q8N412 459 aa18■□□□□ 0.47
TDP1-206ENST00000553569 OR4X2Q8NGF9 303 aa18■□□□□ 0.47
TDP1-206ENST00000553569 OR52I2Q8NH67 350 aa18■□□□□ 0.47
TDP1-206ENST00000553569 CHPT1Q8WUD6 406 aa18■□□□□ 0.47
TDP1-206ENST00000553569 GIMAP1Q8WWP7 306 aa18■□□□□ 0.47
TDP1-206ENST00000553569 DDB2Q92466 427 aa18■□□□□ 0.47
TDP1-206ENST00000553569 DIRAS2Q96HU8 199 aa18■□□□□ 0.47
TDP1-206ENST00000553569 HARBI1Q96MB7 349 aa18■□□□□ 0.47
TDP1-206ENST00000553569 RNF5Q99942 180 aa18■□□□□ 0.47
TDP1-206ENST00000553569 CCL28Q9NRJ3 127 aa18■□□□□ 0.47
TDP1-206ENST00000553569 TAS2R8Q9NYW2 309 aa18■□□□□ 0.47
TDP1-206ENST00000553569 METTL1Q9UBP6 276 aaKnown RBP18■□□□□ 0.47
TDP1-206ENST00000553569 TSPAN15O95858 294 aa17.99■□□□□ 0.47
TDP1-206ENST00000553569 HLA-DRB1P01911 266 aa17.99■□□□□ 0.47
TDP1-206ENST00000553569 TAGLNQ01995 201 aaKnown RBP17.99■□□□□ 0.47
TDP1-206ENST00000553569 PSG5Q15238 335 aa17.99■□□□□ 0.47
TDP1-206ENST00000553569 LIN54Q6MZP7 749 aa17.99■□□□□ 0.47
TDP1-206ENST00000553569 C15orf40Q8WUR7 153 aa17.99■□□□□ 0.47
TDP1-206ENST00000553569 CLCC1Q96S66 551 aa17.99■□□□□ 0.47
TDP1-206ENST00000553569 ZNF2Q9BSG1 426 aaPredicted RBP17.99■□□□□ 0.47
TDP1-206ENST00000553569 PARP11Q9NR21 331 aa17.99■□□□□ 0.47
TDP1-206ENST00000553569 SHOXO15266 292 aa17.98■□□□□ 0.47
TDP1-206ENST00000553569 TNFSF12O43508 249 aa17.98■□□□□ 0.47
TDP1-206ENST00000553569 SLC25A17O43808 307 aa17.98■□□□□ 0.47
TDP1-206ENST00000553569 SPDEFO95238 335 aa17.98■□□□□ 0.47
TDP1-206ENST00000553569 CRYZL1O95825 349 aa17.98■□□□□ 0.47
TDP1-206ENST00000553569 RRASP10301 218 aa17.98■□□□□ 0.47
TDP1-206ENST00000553569 RPL30P62888 115 aaKnown RBP17.98■□□□□ 0.47
TDP1-206ENST00000553569 IL18Q14116 193 aa17.98■□□□□ 0.47
TDP1-206ENST00000553569 KHDC1LQ5JSQ8 128 aa17.98■□□□□ 0.47
TDP1-206ENST00000553569 TCTEX1D2Q8WW35 142 aa17.98■□□□□ 0.47
TDP1-206ENST00000553569 GPHA2Q96T91 129 aa17.98■□□□□ 0.47
TDP1-206ENST00000553569 KLK11Q9UBX7 282 aa17.98■□□□□ 0.47
TDP1-206ENST00000553569 IGHV7-81A0A0B4J1V7 117 aa17.97■□□□□ 0.47
TDP1-206ENST00000553569 A0A1W2PRX2 142 aa17.97■□□□□ 0.47
TDP1-206ENST00000553569 FCGR3BO75015 233 aa17.97■□□□□ 0.47
TDP1-206ENST00000553569 TPPPO94811 219 aa17.97■□□□□ 0.47
TDP1-206ENST00000553569 CSF1P09603 554 aa17.97■□□□□ 0.47
TDP1-206ENST00000553569 SLC35B1P78383 322 aa17.97■□□□□ 0.47
TDP1-206ENST00000553569 DGCR2P98153 550 aa17.97■□□□□ 0.47
TDP1-206ENST00000553569 TCTEX1D4Q5JR98 221 aa17.97■□□□□ 0.47
TDP1-206ENST00000553569 FCAMRQ8WWV6 532 aa17.97■□□□□ 0.47
TDP1-206ENST00000553569 HSD17B10Q99714 261 aaKnown RBP17.97■□□□□ 0.47
TDP1-206ENST00000553569 NXF2Q9GZY0 626 aaKnown RBP17.97■□□□□ 0.47
TDP1-206ENST00000553569 OR51J1Q9H342 316 aa17.97■□□□□ 0.47
TDP1-206ENST00000553569 TPSG1Q9NRR2 321 aa17.97■□□□□ 0.47
TDP1-206ENST00000553569 PRELID3BQ9Y3B1 194 aa17.97■□□□□ 0.47
TDP1-206ENST00000553569 TCRBV4S1A1TA0A5B7 111 aa17.96■□□□□ 0.47
TDP1-206ENST00000553569 M0QYG6 137 aa17.96■□□□□ 0.47
TDP1-206ENST00000553569 ZNF701M0R085 212 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms