RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 H7C2Y5 167 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 S1PR2O95136 353 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 G6PCP35575 357 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 TMEM33P57088 247 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 LINC00205P59089 165 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 RPL39P5Q59GN2 51 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 LYPD2Q6UXB3 125 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 ZNF66Q6ZN08 573 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 BAP18Q8IXM2 172 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 TMED6Q8WW62 240 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 TOLLIPQ9H0E2 274 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 RALYQ9UKM9 306 aaKnown RBP6.84□□□□□ -1.31
RAB5B-210ENST00000553116 USP24Q9UPU5 2620 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 CFAP46Q8IYW2 2715 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 A0A1B0GU03 582 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 C17orf98A8MV24 154 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 H3BP45 60 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 DVL1O14640 695 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 TAAR5O14804 337 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 GPR137BO60478 399 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 FCGR3BO75015 233 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 FBXO24O75426 580 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 IGKV1-39P01597 117 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 IGKV1D-39P04432 117 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 P2RY1P47900 373 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 ZNF585BQ52M93 769 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 RPL7L1Q6DKI1 246 aaKnown RBP6.84□□□□□ -1.31
RAB5B-210ENST00000553116 OR2C3Q8N628 320 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 ITLN2Q8WWU7 325 aaPredicted RBP6.84□□□□□ -1.31
RAB5B-210ENST00000553116 ZNF714Q96N38 554 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 UNKLQ9H9P5 680 aaKnown RBP6.84□□□□□ -1.31
RAB5B-210ENST00000553116 C19orf12Q9NSK7 152 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 LINC00312Q9Y6C7 94 aa6.84□□□□□ -1.31
RAB5B-210ENST00000553116 FAM24AA6NFZ4 105 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 LINC00473A8K010 186 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 SLC31A2O15432 143 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 IGKV1-5P01602 117 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 CCL3L1P16619 93 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 LOXL3P58215 753 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 MSMO1Q15800 293 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 CR1LQ2VPA4 569 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 OXLD1Q5BKU9 147 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 AVPI1Q5T686 147 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 CLRN3Q8NCR9 226 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 LSM10Q969L4 123 aaKnown RBP6.83□□□□□ -1.32
RAB5B-210ENST00000553116 PHYHIPLQ96FC7 376 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 NCOR1P1Q9H4R4 102 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 UBTD1Q9HAC8 227 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 CBLN4Q9NTU7 201 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 LAMP3Q9UQV4 416 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 SESN1Q9Y6P5 492 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 BORCS7-ASMTA0A0B4J1R7 106 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 CHST1O43916 411 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 EIF3GO75821 320 aaKnown RBP eCLIP6.83□□□□□ -1.32
RAB5B-210ENST00000553116 LY6HO94772 140 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 NMBP08949 121 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 IAPPP10997 89 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 COL8A2P25067 703 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 AKR1C3P42330 323 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 PPOXP50336 477 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 GPR157Q5UAW9 335 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 EIF5AL1Q6IS14 154 aaKnown RBP6.83□□□□□ -1.32
RAB5B-210ENST00000553116 SSX9Q7RTT3 188 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 TCF23Q7RTU1 214 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 H2BFWTQ7Z2G1 175 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 LURAP1LQ8IV03 231 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 TMEM217Q8N7C4 229 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 DMBX1Q8NFW5 382 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 AGMATQ9BSE5 352 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 SLC25A31Q9H0C2 315 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 GSN-AS1Q9NRJ2 163 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 HRNRQ86YZ3 2850 aaPredicted RBP6.83□□□□□ -1.32
RAB5B-210ENST00000553116 MYO18BQ8IUG5 2567 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 WNT2P09544 360 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 ZNF134P52741 427 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 SNRPEP62304 92 aaKnown RBP6.83□□□□□ -1.32
RAB5B-210ENST00000553116 RPL23AP62750 156 aaKnown RBP6.83□□□□□ -1.32
RAB5B-210ENST00000553116 STOML3Q8TAV4 291 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 CD300LFQ8TDQ1 290 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 SLC25A32Q9H2D1 315 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 IFI27L2Q9H2X8 130 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 MIOXQ9UGB7 285 aa6.83□□□□□ -1.32
RAB5B-210ENST00000553116 RAB29O14966 203 aa6.82□□□□□ -1.32
RAB5B-210ENST00000553116 PPIHO43447 177 aaKnown RBP6.82□□□□□ -1.32
RAB5B-210ENST00000553116 MMP23AO75900 390 aa6.82□□□□□ -1.32
RAB5B-210ENST00000553116 JTBO76095 146 aa6.82□□□□□ -1.32
RAB5B-210ENST00000553116 CST7O76096 145 aa6.82□□□□□ -1.32
RAB5B-210ENST00000553116 G0S2P27469 103 aa6.82□□□□□ -1.32
RAB5B-210ENST00000553116 DUTP33316 252 aaKnown RBP6.82□□□□□ -1.32
RAB5B-210ENST00000553116 ERVFRD-1P60508 538 aa6.82□□□□□ -1.32
RAB5B-210ENST00000553116 ERVK-16P61578 105 aa6.82□□□□□ -1.32
RAB5B-210ENST00000553116 MRPS11P82912 194 aaKnown RBP6.82□□□□□ -1.32
RAB5B-210ENST00000553116 EWSR1Q01844 656 aaKnown RBP eCLIP6.82□□□□□ -1.32
RAB5B-210ENST00000553116 NHLH2Q02577 135 aa6.82□□□□□ -1.32
RAB5B-210ENST00000553116 MEF2CQ06413 473 aaPredicted RBP6.82□□□□□ -1.32
RAB5B-210ENST00000553116 NCR3LG1Q68D85 454 aa6.82□□□□□ -1.32
RAB5B-210ENST00000553116 Q6ZRM9 215 aa6.82□□□□□ -1.32
RAB5B-210ENST00000553116 STX12Q86Y82 276 aa6.82□□□□□ -1.32
RAB5B-210ENST00000553116 TCTEX1D1Q8N7M0 179 aa6.82□□□□□ -1.32
RAB5B-210ENST00000553116 RAB39BQ96DA2 213 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms