RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 RANGRFQ9HD47 186 aaPredicted RBP8.8□□□□□ -1
NEK3-204ENST00000552973 PALMDQ9NP74 551 aa8.8□□□□□ -1
NEK3-204ENST00000552973 C12orf4Q9NQ89 552 aa8.8□□□□□ -1
NEK3-204ENST00000552973 SLC35D1Q9NTN3 355 aa8.8□□□□□ -1
NEK3-204ENST00000552973 SCN3BQ9NY72 215 aa8.8□□□□□ -1
NEK3-204ENST00000552973 C13orf42A0A1B0GVH6 325 aa8.79□□□□□ -1
NEK3-204ENST00000552973 TRDCB7Z8K6 153 aa8.79□□□□□ -1
NEK3-204ENST00000552973 ANKRD65E5RJM6 399 aa8.79□□□□□ -1
NEK3-204ENST00000552973 SLC17A2O00624 439 aa8.79□□□□□ -1
NEK3-204ENST00000552973 CASQ2O14958 399 aaPredicted RBP8.79□□□□□ -1
NEK3-204ENST00000552973 SPDEFO95238 335 aa8.79□□□□□ -1
NEK3-204ENST00000552973 APOA2P02652 100 aa8.79□□□□□ -1
NEK3-204ENST00000552973 APELAP0DMC3 54 aa8.79□□□□□ -1
NEK3-204ENST00000552973 IGHV4-30-4P0DP06 118 aa8.79□□□□□ -1
NEK3-204ENST00000552973 LYL1P12980 280 aa8.79□□□□□ -1
NEK3-204ENST00000552973 SSBP2P81877 361 aaPredicted RBP8.79□□□□□ -1
NEK3-204ENST00000552973 IRF3Q14653 427 aa8.79□□□□□ -1
NEK3-204ENST00000552973 RAB11BQ15907 218 aa8.79□□□□□ -1
NEK3-204ENST00000552973 HES5Q5TA89 166 aa8.79□□□□□ -1
NEK3-204ENST00000552973 PDPNQ86YL7 162 aa8.79□□□□□ -1
NEK3-204ENST00000552973 Q8N1Y9 231 aa8.79□□□□□ -1
NEK3-204ENST00000552973 ADAM30Q9UKF2 790 aa8.79□□□□□ -1
NEK3-204ENST00000552973 HSF4Q9ULV5 492 aa8.79□□□□□ -1
NEK3-204ENST00000552973 MGAT4AQ9UM21 535 aa8.79□□□□□ -1
NEK3-204ENST00000552973 STUB1Q9UNE7 303 aa8.79□□□□□ -1
NEK3-204ENST00000552973 BET1O15155 118 aa8.78□□□□□ -1
NEK3-204ENST00000552973 IGLV1-51P01701 117 aa8.78□□□□□ -1
NEK3-204ENST00000552973 IGLV2-23P01705 113 aa8.78□□□□□ -1
NEK3-204ENST00000552973 GSTT2P0CG29 244 aa8.78□□□□□ -1
NEK3-204ENST00000552973 GSTT2BP0CG30 244 aa8.78□□□□□ -1
NEK3-204ENST00000552973 CALRP27797 417 aaKnown RBP8.78□□□□□ -1
NEK3-204ENST00000552973 SYNJ2BPP57105 145 aa8.78□□□□□ -1
NEK3-204ENST00000552973 MOGAT2Q3SYC2 334 aa8.78□□□□□ -1
NEK3-204ENST00000552973 IGSF11Q5DX21 431 aa8.78□□□□□ -1
NEK3-204ENST00000552973 BVESQ8NE79 360 aa8.78□□□□□ -1
NEK3-204ENST00000552973 MAFIPQ8WZ33 124 aa8.78□□□□□ -1
NEK3-204ENST00000552973 FAM3DQ96BQ1 224 aa8.78□□□□□ -1
NEK3-204ENST00000552973 CCDC90BQ9GZT6 254 aa8.78□□□□□ -1
NEK3-204ENST00000552973 VCXQ9H320 206 aa8.78□□□□□ -1
NEK3-204ENST00000552973 SDHAF2Q9NX18 166 aa8.78□□□□□ -1
NEK3-204ENST00000552973 KCNK7Q9Y2U2 307 aa8.78□□□□□ -1
NEK3-204ENST00000552973 A0A075B6Q4 140 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 TMEM272A0A1B0GTI8 110 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 SRRM4A7MD48 611 aaKnown RBP8.77□□□□□ -1.01
NEK3-204ENST00000552973 FABP7O15540 132 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 DENRO43583 198 aaKnown RBP8.77□□□□□ -1.01
NEK3-204ENST00000552973 TRBV12-3P01733 135 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 CRYGBP07316 175 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 ZP3P21754 424 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 MAP2K4P45985 399 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 MRPS15P82914 257 aaKnown RBP8.77□□□□□ -1.01
NEK3-204ENST00000552973 FABP5Q01469 135 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 TPBGQ13641 420 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 SGPP2Q8IWX5 399 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 OR56B1Q8NGI3 324 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 C5orf30Q96GV9 206 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 HARBI1Q96MB7 349 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 CITED4Q96RK1 184 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 PHB2Q99623 299 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 TM2D3Q9BRN9 247 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 OR2D2Q9H210 308 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 C19orf73Q9NVV2 129 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 COA4Q9NYJ1 87 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 NKX1-2Q9UD57 310 aaPredicted RBP8.77□□□□□ -1.01
NEK3-204ENST00000552973 ZNF230Q9UIE0 474 aaPredicted RBP8.77□□□□□ -1.01
NEK3-204ENST00000552973 V9GY05 133 aa8.77□□□□□ -1.01
NEK3-204ENST00000552973 TENM3Q9P273 2699 aa8.76□□□□□ -1.01
NEK3-204ENST00000552973 A0A0G2JLM5 398 aa8.76□□□□□ -1.01
NEK3-204ENST00000552973 J3QRK9 145 aa8.76□□□□□ -1.01
NEK3-204ENST00000552973 LDLRAD4O15165 306 aa8.76□□□□□ -1.01
NEK3-204ENST00000552973 SHOXO15266 292 aa8.76□□□□□ -1.01
NEK3-204ENST00000552973 RGS10O43665 173 aa8.76□□□□□ -1.01
NEK3-204ENST00000552973 ARL6IP5O75915 188 aa8.76□□□□□ -1.01
NEK3-204ENST00000552973 GNB3P16520 340 aa8.76□□□□□ -1.01
NEK3-204ENST00000552973 LGALS7P47929 136 aa8.76□□□□□ -1.01
NEK3-204ENST00000552973 AQP4P55087 323 aa8.76□□□□□ -1.01
NEK3-204ENST00000552973 KLF5Q13887 457 aaPredicted RBP8.76□□□□□ -1.01
NEK3-204ENST00000552973 IL34Q6ZMJ4 242 aa8.76□□□□□ -1.01
NEK3-204ENST00000552973 OR4A4PQ8NGN8 299 aa8.76□□□□□ -1.01
NEK3-204ENST00000552973 OR9G4Q8NGQ1 327 aa8.76□□□□□ -1.01
NEK3-204ENST00000552973 PEF1Q9UBV8 284 aaKnown RBP8.76□□□□□ -1.01
NEK3-204ENST00000552973 TPRKBQ9Y3C4 175 aa8.76□□□□□ -1.01
NEK3-204ENST00000552973 RBM7Q9Y580 266 aaKnown RBP8.76□□□□□ -1.01
NEK3-204ENST00000552973 MSGN1A6NI15 193 aa8.75□□□□□ -1.01
NEK3-204ENST00000552973 H3BUA1 57 aa8.75□□□□□ -1.01
NEK3-204ENST00000552973 RBMXL2O75526 392 aaKnown RBP8.75□□□□□ -1.01
NEK3-204ENST00000552973 PRH1P02810 166 aa8.75□□□□□ -1.01
NEK3-204ENST00000552973 FCGR3AP08637 254 aa8.75□□□□□ -1.01
NEK3-204ENST00000552973 SERPINB10P48595 397 aa8.75□□□□□ -1.01
NEK3-204ENST00000552973 OR10A3P58181 314 aa8.75□□□□□ -1.01
NEK3-204ENST00000552973 MLLT11Q13015 90 aaPredicted RBP8.75□□□□□ -1.01
NEK3-204ENST00000552973 MRGPRG-AS1Q2M3A8 158 aa8.75□□□□□ -1.01
NEK3-204ENST00000552973 IDO2Q6ZQW0 420 aa8.75□□□□□ -1.01
NEK3-204ENST00000552973 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.75□□□□□ -1.01
NEK3-204ENST00000552973 OR10J5Q8NHC4 309 aa8.75□□□□□ -1.01
NEK3-204ENST00000552973 NRG4Q8WWG1 115 aa8.75□□□□□ -1.01
NEK3-204ENST00000552973 RAB3CQ96E17 227 aa8.75□□□□□ -1.01
NEK3-204ENST00000552973 MGLLQ99685 303 aa8.75□□□□□ -1.01
NEK3-204ENST00000552973 TINAGL1Q9GZM7 467 aaPredicted RBP8.75□□□□□ -1.01
NEK3-204ENST00000552973 DUSP21Q9H596 190 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms