RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 GNG2P59768 71 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 GNMTQ14749 295 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 SRSF7Q16629 238 aaKnown RBP eCLIP9.26□□□□□ -0.93
CKAP4-202ENST00000552828 DEFB136Q30KP8 78 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 ZNF260Q3ZCT1 412 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 CXorf66Q5JRM2 361 aaPredicted RBP9.26□□□□□ -0.93
CKAP4-202ENST00000552828 MZT2AQ6P582 158 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 LCNL1Q6ZST4 164 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 MOB3BQ86TA1 216 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 OR2AK2Q8NG84 335 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 OR8H1Q8NGG4 311 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 OR4A4PQ8NGN8 299 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 OR2T10Q8NGZ9 312 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 AP3S1Q92572 193 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 PRR25Q96S07 402 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 ABHD14AQ9BUJ0 271 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 SLIRPQ9GZT3 109 aaKnown RBP9.26□□□□□ -0.93
CKAP4-202ENST00000552828 NXF2Q9GZY0 626 aaKnown RBP9.26□□□□□ -0.93
CKAP4-202ENST00000552828 CCDC59Q9P031 241 aaKnown RBP9.26□□□□□ -0.93
CKAP4-202ENST00000552828 COMMD3Q9UBI1 195 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 SLC23A1Q9UHI7 598 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 ZNF230Q9UIE0 474 aaPredicted RBP9.26□□□□□ -0.93
CKAP4-202ENST00000552828 ELF5Q9UKW6 265 aaPredicted RBP9.26□□□□□ -0.93
CKAP4-202ENST00000552828 SACSQ9NZJ4 4579 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 FABP7O15540 132 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 XRCC3O43542 346 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 IGF1P05019 195 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 REG1BP48304 166 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 PPP5CP53041 499 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 RAB25P57735 213 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 TRIM16LQ309B1 348 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 Q6ZS49 121 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 FAM71E2Q8N5Q1 922 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 MYOZ3Q8TDC0 251 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 C4orf3Q8WVX3 66 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 RTN4IP1Q8WWV3 396 aaPredicted RBP9.25□□□□□ -0.93
CKAP4-202ENST00000552828 EDARADDQ8WWZ3 215 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 CMTM3Q96MX0 182 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 FAM210AQ96ND0 272 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 S1PR3Q99500 378 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 LYSTQ99698 3801 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 ST6GALNAC5Q9BVH7 336 aa9.25□□□□□ -0.93
CKAP4-202ENST00000552828 IGHV3-72A0A0B4J1Y9 119 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 SEC14L6B5MCN3 397 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 ITGB1BP1O14713 200 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 TXNL1O43396 289 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 DIRAS3O95661 229 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 MOSP00540 346 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 APOA1P02647 267 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 GSTT2P0CG29 244 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 GSTT2BP0CG30 244 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 PSMB8P28062 276 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 SOX6P35712 828 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 ECI1P42126 302 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 ZNF137PP52743 207 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 TMEM69Q5SWH9 247 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 OR10J5Q8NHC4 309 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 MCFD2Q8NI22 146 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 NUDCD2Q8WVJ2 157 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 MAFIPQ8WZ33 124 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 GHITMQ9H3K2 345 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 AUNIPQ9H7T9 357 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 OR1A1Q9P1Q5 309 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 DNAH1Q9P2D7 4330 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 TENM2Q9NT68 2774 aa9.24□□□□□ -0.93
CKAP4-202ENST00000552828 IGKV1-6A0A0C4DH72 117 aa9.23□□□□□ -0.93
CKAP4-202ENST00000552828 BET1O15155 118 aa9.23□□□□□ -0.93
CKAP4-202ENST00000552828 LANCL1O43813 399 aa9.23□□□□□ -0.93
CKAP4-202ENST00000552828 SSX5O60225 188 aa9.23□□□□□ -0.93
CKAP4-202ENST00000552828 CTXN2P0C2S0 81 aa9.23□□□□□ -0.93
CKAP4-202ENST00000552828 INSL3P51460 131 aa9.23□□□□□ -0.93
CKAP4-202ENST00000552828 KIAA0141Q14154 515 aaPredicted RBP9.23□□□□□ -0.93
CKAP4-202ENST00000552828 IGSF11Q5DX21 431 aa9.23□□□□□ -0.93
CKAP4-202ENST00000552828 RASL11BQ9BPW5 248 aa9.23□□□□□ -0.93
CKAP4-202ENST00000552828 HSPB9Q9BQS6 159 aa9.23□□□□□ -0.93
CKAP4-202ENST00000552828 CABLES2Q9BTV7 478 aa9.23□□□□□ -0.93
CKAP4-202ENST00000552828 C11orf54Q9H0W9 315 aaPredicted RBP9.23□□□□□ -0.93
CKAP4-202ENST00000552828 IFI27L2Q9H2X8 130 aa9.23□□□□□ -0.93
CKAP4-202ENST00000552828 RDH8Q9NYR8 311 aa9.23□□□□□ -0.93
CKAP4-202ENST00000552828 PIPOXQ9P0Z9 390 aa9.23□□□□□ -0.93
CKAP4-202ENST00000552828 ZNF256Q9Y2P7 627 aaPredicted RBP9.23□□□□□ -0.93
CKAP4-202ENST00000552828 CSMD3Q7Z407 3707 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 TRBV6-7A0A0A0MS04 114 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 ZNF736B4DX44 427 aaPredicted RBP9.22□□□□□ -0.93
CKAP4-202ENST00000552828 RAB29O14966 203 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 ST8SIA5O15466 376 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 HPGDSO60760 199 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 EIF4EP06730 217 aaKnown RBP9.22□□□□□ -0.93
CKAP4-202ENST00000552828 OR5H8P0DN80 308 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 VDAC1P21796 283 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 ETV6P41212 452 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 CBX5P45973 191 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 F2RL1P55085 397 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 TAS2R20P59543 309 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 RUNX1Q01196 453 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 ZNF45Q02386 682 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 ODF3L1Q8IXM7 274 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 OR11H1Q8NG94 326 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 UBE2E2Q96LR5 201 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 ASCL2Q99929 193 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms