RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 DIMT1Q9UNQ2 313 aaKnown RBP12.72□□□□□ -0.37
CACNB3-222ENST00000552465 EXOSC1Q9Y3B2 195 aaKnown RBP12.72□□□□□ -0.37
CACNB3-222ENST00000552465 HERC2O95714 4834 aa12.72□□□□□ -0.37
CACNB3-222ENST00000552465 BMPR1BO00238 502 aa12.71□□□□□ -0.37
CACNB3-222ENST00000552465 CIB2O75838 187 aa12.71□□□□□ -0.37
CACNB3-222ENST00000552465 MYL12AP19105 171 aa12.71□□□□□ -0.37
CACNB3-222ENST00000552465 HTR2CP28335 458 aa12.71□□□□□ -0.37
CACNB3-222ENST00000552465 RPS27AP62979 156 aaKnown RBP12.71□□□□□ -0.37
CACNB3-222ENST00000552465 GUCA2BQ16661 112 aa12.71□□□□□ -0.37
CACNB3-222ENST00000552465 ZNF485Q8NCK3 441 aa12.71□□□□□ -0.37
CACNB3-222ENST00000552465 OVOL2Q9BRP0 275 aa12.71□□□□□ -0.37
CACNB3-222ENST00000552465 TRBV6-6A0A0A6YYG2 114 aa12.7□□□□□ -0.38
CACNB3-222ENST00000552465 IRGMA1A4Y4 181 aa12.7□□□□□ -0.38
CACNB3-222ENST00000552465 CXorf65A6NEN9 183 aa12.7□□□□□ -0.38
CACNB3-222ENST00000552465 DYNC1I1O14576 645 aa12.7□□□□□ -0.38
CACNB3-222ENST00000552465 UBBP0CG47 229 aa12.7□□□□□ -0.38
CACNB3-222ENST00000552465 APELAP0DMC3 54 aa12.7□□□□□ -0.38
CACNB3-222ENST00000552465 KIR2DS2P43631 304 aa12.7□□□□□ -0.38
CACNB3-222ENST00000552465 ADAD2Q8NCV1 583 aaKnown RBP12.7□□□□□ -0.38
CACNB3-222ENST00000552465 DYNLRB2Q8TF09 96 aa12.7□□□□□ -0.38
CACNB3-222ENST00000552465 RIMS4Q9H426 269 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-222ENST00000552465 SLC35D1Q9NTN3 355 aa12.7□□□□□ -0.38
CACNB3-222ENST00000552465 NUPR2A6NF83 97 aa12.69□□□□□ -0.38
CACNB3-222ENST00000552465 MSGN1A6NI15 193 aa12.69□□□□□ -0.38
CACNB3-222ENST00000552465 PMS2P11Q13670 270 aa12.69□□□□□ -0.38
CACNB3-222ENST00000552465 NICN1Q9BSH3 213 aa12.69□□□□□ -0.38
CACNB3-222ENST00000552465 TM2D1Q9BX74 207 aa12.69□□□□□ -0.38
CACNB3-222ENST00000552465 TMEM59Q9BXS4 323 aa12.69□□□□□ -0.38
CACNB3-222ENST00000552465 ZC4H2Q9NQZ6 224 aa12.69□□□□□ -0.38
CACNB3-222ENST00000552465 PLEKHJ1Q9NW61 149 aa12.69□□□□□ -0.38
CACNB3-222ENST00000552465 ZNF230Q9UIE0 474 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-222ENST00000552465 PNMA8CA0A1B0GUJ8 204 aa12.68□□□□□ -0.38
CACNB3-222ENST00000552465 M0R1X1 148 aa12.68□□□□□ -0.38
CACNB3-222ENST00000552465 ATP5HO75947 161 aa12.68□□□□□ -0.38
CACNB3-222ENST00000552465 SCTP09683 121 aa12.68□□□□□ -0.38
CACNB3-222ENST00000552465 OR9G9P0C7N8 305 aa12.68□□□□□ -0.38
CACNB3-222ENST00000552465 HLA-DRB3P79483 266 aa12.68□□□□□ -0.38
CACNB3-222ENST00000552465 RHOGP84095 191 aa12.68□□□□□ -0.38
CACNB3-222ENST00000552465 ATP5G2Q06055 141 aa12.68□□□□□ -0.38
CACNB3-222ENST00000552465 MRGPRG-AS1Q2M3A8 158 aa12.68□□□□□ -0.38
CACNB3-222ENST00000552465 RPP25LQ8N5L8 163 aaKnown RBP12.68□□□□□ -0.38
CACNB3-222ENST00000552465 KCNG3Q8TAE7 436 aa12.68□□□□□ -0.38
CACNB3-222ENST00000552465 WDR89Q96FK6 387 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-222ENST00000552465 TMEM80Q96HE8 168 aa12.68□□□□□ -0.38
CACNB3-222ENST00000552465 PHB2Q99623 299 aa12.68□□□□□ -0.38
CACNB3-222ENST00000552465 HDHD3Q9BSH5 251 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-222ENST00000552465 C9orf16Q9BUW7 83 aa12.68□□□□□ -0.38
CACNB3-222ENST00000552465 AKIP1Q9NQ31 210 aa12.68□□□□□ -0.38
CACNB3-222ENST00000552465 TECRQ9NZ01 308 aaKnown RBP12.68□□□□□ -0.38
CACNB3-222ENST00000552465 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.67□□□□□ -0.38
CACNB3-222ENST00000552465 C2orf70A6NJV1 201 aa12.67□□□□□ -0.38
CACNB3-222ENST00000552465 FAM223BA6NKX1 122 aa12.67□□□□□ -0.38
CACNB3-222ENST00000552465 SRRM4A7MD48 611 aaKnown RBP12.67□□□□□ -0.38
CACNB3-222ENST00000552465 FOLR2P14207 255 aa12.67□□□□□ -0.38
CACNB3-222ENST00000552465 EDN2P20800 178 aa12.67□□□□□ -0.38
CACNB3-222ENST00000552465 UNC119Q13432 240 aa12.67□□□□□ -0.38
CACNB3-222ENST00000552465 MED21Q13503 144 aa12.67□□□□□ -0.38
CACNB3-222ENST00000552465 EXOSC2Q13868 293 aaKnown RBP12.67□□□□□ -0.38
CACNB3-222ENST00000552465 CEMP1Q6PRD7 247 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-222ENST00000552465 FAM223AQ8IWN6 122 aa12.67□□□□□ -0.38
CACNB3-222ENST00000552465 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-222ENST00000552465 KCTD12Q96CX2 325 aaKnown RBP12.67□□□□□ -0.38
CACNB3-222ENST00000552465 HARBI1Q96MB7 349 aa12.67□□□□□ -0.38
CACNB3-222ENST00000552465 GGTLC1Q9BX51 225 aa12.67□□□□□ -0.38
CACNB3-222ENST00000552465 Q9N2K0 584 aa12.67□□□□□ -0.38
CACNB3-222ENST00000552465 AK3Q9UIJ7 227 aa12.67□□□□□ -0.38
CACNB3-222ENST00000552465 MGAT4AQ9UM21 535 aa12.67□□□□□ -0.38
CACNB3-222ENST00000552465 A0A0A6YYD4 124 aa12.66□□□□□ -0.38
CACNB3-222ENST00000552465 TRBV9A0A0B4J1U6 114 aa12.66□□□□□ -0.38
CACNB3-222ENST00000552465 IGKV1-6A0A0C4DH72 117 aa12.66□□□□□ -0.38
CACNB3-222ENST00000552465 PRH1P02810 166 aa12.66□□□□□ -0.38
CACNB3-222ENST00000552465 TAS2R43P59537 309 aa12.66□□□□□ -0.38
CACNB3-222ENST00000552465 ZNF45Q02386 682 aa12.66□□□□□ -0.38
CACNB3-222ENST00000552465 TMEM177Q53S58 311 aa12.66□□□□□ -0.38
CACNB3-222ENST00000552465 C1orf100Q5SVJ3 147 aa12.66□□□□□ -0.38
CACNB3-222ENST00000552465 ZFP1Q6P2D0 407 aa12.66□□□□□ -0.38
CACNB3-222ENST00000552465 SLC16A13Q7RTY0 426 aa12.66□□□□□ -0.38
CACNB3-222ENST00000552465 KCNK15Q9H427 330 aa12.66□□□□□ -0.38
CACNB3-222ENST00000552465 RDH8Q9NYR8 311 aa12.66□□□□□ -0.38
CACNB3-222ENST00000552465 A0A0J9YWU9 116 aa12.65□□□□□ -0.38
CACNB3-222ENST00000552465 SHOXO15266 292 aa12.65□□□□□ -0.38
CACNB3-222ENST00000552465 TUSC2O75896 110 aa12.65□□□□□ -0.38
CACNB3-222ENST00000552465 CD1AP06126 327 aa12.65□□□□□ -0.38
CACNB3-222ENST00000552465 CELP19835 753 aa12.65□□□□□ -0.38
CACNB3-222ENST00000552465 MAPK3P27361 379 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-222ENST00000552465 QRFPP83859 136 aa12.65□□□□□ -0.38
CACNB3-222ENST00000552465 EWSR1Q01844 656 aaKnown RBP eCLIP12.65□□□□□ -0.38
CACNB3-222ENST00000552465 THRSPQ92748 146 aa12.65□□□□□ -0.38
CACNB3-222ENST00000552465 DMRT1Q9Y5R6 373 aa12.65□□□□□ -0.38
CACNB3-222ENST00000552465 LOC102724200A0A096LPH7 203 aaPredicted RBP12.64□□□□□ -0.39
CACNB3-222ENST00000552465 TMEM14DPA8MWL7 114 aa12.64□□□□□ -0.39
CACNB3-222ENST00000552465 LGALS9O00182 355 aa12.64□□□□□ -0.39
CACNB3-222ENST00000552465 MPPED1O15442 326 aa12.64□□□□□ -0.39
CACNB3-222ENST00000552465 SOCS1O15524 211 aa12.64□□□□□ -0.39
CACNB3-222ENST00000552465 TNXAQ16473 311 aa12.64□□□□□ -0.39
CACNB3-222ENST00000552465 PRSS8Q16651 343 aa12.64□□□□□ -0.39
CACNB3-222ENST00000552465 GLT8D1Q68CQ7 371 aa12.64□□□□□ -0.39
CACNB3-222ENST00000552465 LRRTM1Q86UE6 522 aa12.64□□□□□ -0.39
CACNB3-222ENST00000552465 TEX45Q8NA69 505 aa12.64□□□□□ -0.39
CACNB3-222ENST00000552465 ZNF555Q8NEP9 628 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms