RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 RABL2AQ9UBK7 228 aaPredicted RBP13.73□□□□□ -0.21
CDK4-208ENST00000551706 RSL24D1Q9UHA3 163 aaKnown RBP13.73□□□□□ -0.21
CDK4-208ENST00000551706 RABL2BQ9UNT1 228 aa13.73□□□□□ -0.21
CDK4-208ENST00000551706 RYR3Q15413 4870 aa13.73□□□□□ -0.21
CDK4-208ENST00000551706 CTDSP2O14595 271 aa13.72□□□□□ -0.21
CDK4-208ENST00000551706 RRASP10301 218 aa13.72□□□□□ -0.21
CDK4-208ENST00000551706 RCVRNP35243 200 aa13.72□□□□□ -0.21
CDK4-208ENST00000551706 CBX3Q13185 183 aa13.72□□□□□ -0.21
CDK4-208ENST00000551706 CENPVQ7Z7K6 275 aaPredicted RBP13.72□□□□□ -0.21
CDK4-208ENST00000551706 FOXRED2Q8IWF2 684 aa13.72□□□□□ -0.21
CDK4-208ENST00000551706 LAX1Q8IWV1 398 aa13.72□□□□□ -0.21
CDK4-208ENST00000551706 OR5H2Q8NGV7 314 aa13.72□□□□□ -0.21
CDK4-208ENST00000551706 WIPF2Q8TF74 440 aaPredicted RBP13.72□□□□□ -0.21
CDK4-208ENST00000551706 GIMAP1Q8WWP7 306 aa13.72□□□□□ -0.21
CDK4-208ENST00000551706 MIXL1Q9H2W2 232 aa13.72□□□□□ -0.21
CDK4-208ENST00000551706 SLC35D1Q9NTN3 355 aa13.72□□□□□ -0.21
CDK4-208ENST00000551706 EHFQ9NZC4 300 aa13.72□□□□□ -0.21
CDK4-208ENST00000551706 NDUFA13Q9P0J0 144 aa13.72□□□□□ -0.21
CDK4-208ENST00000551706 J3QRK9 145 aa13.71□□□□□ -0.21
CDK4-208ENST00000551706 NDUFA3O95167 84 aa13.71□□□□□ -0.21
CDK4-208ENST00000551706 PPYP01298 95 aa13.71□□□□□ -0.21
CDK4-208ENST00000551706 AADACP22760 399 aa13.71□□□□□ -0.21
CDK4-208ENST00000551706 MSMO1Q15800 293 aa13.71□□□□□ -0.21
CDK4-208ENST00000551706 RTL8BQ17RB0 113 aa13.71□□□□□ -0.21
CDK4-208ENST00000551706 OVCH2Q7RTZ1 564 aa13.71□□□□□ -0.21
CDK4-208ENST00000551706 FLYWCH2Q96CP2 140 aaKnown RBP13.71□□□□□ -0.21
CDK4-208ENST00000551706 RITA1Q96K30 269 aa13.71□□□□□ -0.21
CDK4-208ENST00000551706 TSNAXQ99598 290 aaKnown RBP13.71□□□□□ -0.21
CDK4-208ENST00000551706 C6orf62Q9GZU0 229 aaPredicted RBP13.71□□□□□ -0.21
CDK4-208ENST00000551706 IGKV1D-13A0A0B4J2D9 117 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 M0QZ24 198 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 AP4M1O00189 453 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 FBXO24O75426 580 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 SPDEFO95238 335 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 IGKV1-13P0DP09 117 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 DUTP33316 252 aaKnown RBP13.7□□□□□ -0.22
CDK4-208ENST00000551706 LINC00205P59089 165 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 HERV-K104P61576 105 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 MRPS10P82664 201 aaKnown RBP13.7□□□□□ -0.22
CDK4-208ENST00000551706 DYRK1AQ13627 763 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 C5orf64Q2M2E5 130 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 MCFD2Q8NI22 146 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 CHPT1Q8WUD6 406 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 BORCS5Q969J3 196 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 C5orf30Q96GV9 206 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 GON7Q9BXV9 100 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 NXF2Q9GZY0 626 aaKnown RBP13.7□□□□□ -0.22
CDK4-208ENST00000551706 MMP27Q9H306 513 aa13.7□□□□□ -0.22
CDK4-208ENST00000551706 RBMX2Q9Y388 322 aaKnown RBP13.7□□□□□ -0.22
CDK4-208ENST00000551706 RRHO14718 337 aa13.69□□□□□ -0.22
CDK4-208ENST00000551706 HLA-DRB1P01911 266 aa13.69□□□□□ -0.22
CDK4-208ENST00000551706 IGKV1-16P04430 117 aa13.69□□□□□ -0.22
CDK4-208ENST00000551706 CNTFRP26992 372 aa13.69□□□□□ -0.22
CDK4-208ENST00000551706 RPS16P62249 146 aaKnown RBP13.69□□□□□ -0.22
CDK4-208ENST00000551706 ACTBL2Q562R1 376 aa13.69□□□□□ -0.22
CDK4-208ENST00000551706 LIN54Q6MZP7 749 aa13.69□□□□□ -0.22
CDK4-208ENST00000551706 DHRS11Q6UWP2 260 aa13.69□□□□□ -0.22
CDK4-208ENST00000551706 ZBTB34Q8NCN2 500 aa13.69□□□□□ -0.22
CDK4-208ENST00000551706 OR5AU1Q8NGC0 362 aa13.69□□□□□ -0.22
CDK4-208ENST00000551706 SECTM1Q8WVN6 248 aa13.69□□□□□ -0.22
CDK4-208ENST00000551706 FCAMRQ8WWV6 532 aa13.69□□□□□ -0.22
CDK4-208ENST00000551706 RBMXL1Q96E39 390 aaKnown RBP13.69□□□□□ -0.22
CDK4-208ENST00000551706 DIRAS2Q96HU8 199 aa13.69□□□□□ -0.22
CDK4-208ENST00000551706 ABHD1Q96SE0 405 aa13.69□□□□□ -0.22
CDK4-208ENST00000551706 HSD17B10Q99714 261 aaKnown RBP13.69□□□□□ -0.22
CDK4-208ENST00000551706 ZNF107Q9UII5 783 aaPredicted RBP13.69□□□□□ -0.22
CDK4-208ENST00000551706 PRELID3BQ9Y3B1 194 aa13.69□□□□□ -0.22
CDK4-208ENST00000551706 DPPA5A6NC42 116 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 IGLV2-14P01704 120 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 PMP2P02689 132 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 HLA-DMAP28067 261 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 HRH1P35367 487 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 LGALS7P47929 136 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 RFX2P48378 723 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 SLC35B1P78383 322 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 PLGLAQ15195 96 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 PYHIN1Q6K0P9 492 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 ZNF66Q6ZN08 573 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 LYSMD2Q8IV50 215 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 C11orf44Q8N8P7 122 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 OR4X2Q8NGF9 303 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 OR6F1Q8NGZ6 308 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 DDB2Q92466 427 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 SLC5A7Q9GZV3 580 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 MTFP1Q9UDX5 166 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 ZNF580Q9UK33 172 aa13.68□□□□□ -0.22
CDK4-208ENST00000551706 PSMB11A5LHX3 300 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 GABARAPH6UMI1 98 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 CD28P10747 220 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 TBPP20226 339 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 FXYD4P59646 89 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 SSBP1Q04837 148 aaKnown RBP13.67□□□□□ -0.22
CDK4-208ENST00000551706 C2orf68Q2NKX9 166 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 TMEM177Q53S58 311 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 ZNF660Q6AZW8 331 aaPredicted RBP13.67□□□□□ -0.22
CDK4-208ENST00000551706 KCTD9Q7L273 389 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 STPG2Q8N412 459 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 COMMD1Q8N668 190 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 BVESQ8NE79 360 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 OR52I2Q8NH67 350 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms