RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 FCGR1BQ92637 280 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 UBE2E2Q96LR5 201 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 ALX4Q9H161 411 aaPredicted RBP10.1□□□□□ -0.79
NPAS3-209ENST00000551008 OR2D2Q9H210 308 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 KIAA1456Q9P272 454 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 METTL1Q9UBP6 276 aaKnown RBP10.1□□□□□ -0.79
NPAS3-209ENST00000551008 SCOCQ9UIL1 159 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 A0A1W2PN81 502 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 CA2P00918 260 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 GADD45AP24522 165 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 CHRNA7P36544 502 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 SERPINB10P48595 397 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 RAB9AP51151 201 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 RAB25P57735 213 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 PJVKQ0ZLH3 352 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 SRSF7Q16629 238 aaKnown RBP eCLIP10.09□□□□□ -0.79
NPAS3-209ENST00000551008 PDPNQ86YL7 162 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 OR5H6Q8NGV6 325 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 LGALS14Q8TCE9 139 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 NUDCD2Q8WVJ2 157 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 DDB2Q92466 427 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 SLC25A38Q96DW6 304 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 OR5B12Q96R08 314 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 CLCC1Q96S66 551 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 RNF5Q99942 180 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 MCRIP2Q9BUT9 160 aaKnown RBP10.09□□□□□ -0.79
NPAS3-209ENST00000551008 ATG5Q9H1Y0 275 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 ZNF221Q9UK13 617 aa10.09□□□□□ -0.79
NPAS3-209ENST00000551008 FOXA2Q9Y261 457 aaPredicted RBP10.09□□□□□ -0.79
NPAS3-209ENST00000551008 SRRM4A7MD48 611 aaKnown RBP10.08□□□□□ -0.8
NPAS3-209ENST00000551008 SLC25A17O43808 307 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 SPDEFO95238 335 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 GSTP1P09211 210 aaKnown RBP10.08□□□□□ -0.8
NPAS3-209ENST00000551008 SDC2P34741 201 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 ZNF260Q3ZCT1 412 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 CDNFQ49AH0 187 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 C11orf87Q6NUJ2 197 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 SFXN4Q6P4A7 337 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 OR11H1Q8NG94 326 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 CENPOQ9BU64 300 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 GPR61Q9BZJ8 451 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 Q9H521 79 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 SLC35D1Q9NTN3 355 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 DAPK2Q9UIK4 370 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 VSIG4Q9Y279 399 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 RRP15Q9Y3B9 282 aaKnown RBP10.08□□□□□ -0.8
NPAS3-209ENST00000551008 A3GALT2U3KPV4 340 aa10.08□□□□□ -0.8
NPAS3-209ENST00000551008 TMEM235A6NFC5 223 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 LINC00473A8K010 186 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 IGLV2-14P01704 120 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 DTYMKP23919 212 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 TGFBR1P36897 503 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 RANBP1P43487 201 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 ARFRP1Q13795 201 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 KCTD21Q4G0X4 260 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 HACD4Q5VWC8 232 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 ZNF562Q6V9R5 426 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 TPRA1Q86W33 373 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 PPP1R27Q86WC6 154 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 LFNGQ8NES3 379 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 OR5M8Q8NGP6 311 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 OR10J5Q8NHC4 309 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 TSNAXQ99598 290 aaKnown RBP10.07□□□□□ -0.8
NPAS3-209ENST00000551008 SSR3Q9UNL2 185 aa10.07□□□□□ -0.8
NPAS3-209ENST00000551008 HUWE1Q7Z6Z7 4374 aaKnown RBP10.07□□□□□ -0.8
NPAS3-209ENST00000551008 IGKV1D-13A0A0B4J2D9 117 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 METTL21EPA6NDL7 271 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 SEC14L6B5MCN3 397 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 APOA2P02652 100 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 IGKV1-13P0DP09 117 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 DUTP33316 252 aaKnown RBP10.06□□□□□ -0.8
NPAS3-209ENST00000551008 RPS16P62249 146 aaKnown RBP10.06□□□□□ -0.8
NPAS3-209ENST00000551008 MXD1Q05195 221 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 ZNF616Q08AN1 781 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 PLGLAQ15195 96 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 NEDD8Q15843 81 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 AKIRIN2Q53H80 203 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 TMEM177Q53S58 311 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 TMEM65Q6PI78 240 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 UNQ5815/PRO19632Q6UWF5 114 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 BVESQ8NE79 360 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 OR1N2Q8NGR9 330 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 DCUN1D4Q92564 292 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 ARPC1AQ92747 370 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 FLYWCH2Q96CP2 140 aaKnown RBP10.06□□□□□ -0.8
NPAS3-209ENST00000551008 RHBDL2Q9NX52 303 aa10.06□□□□□ -0.8
NPAS3-209ENST00000551008 IGHV4OR15-8A0A075B7B6 117 aa10.05□□□□□ -0.8
NPAS3-209ENST00000551008 A0A087WW49 117 aa10.05□□□□□ -0.8
NPAS3-209ENST00000551008 RBMXL2O75526 392 aaKnown RBP10.05□□□□□ -0.8
NPAS3-209ENST00000551008 LGALS1P09382 135 aaKnown RBP10.05□□□□□ -0.8
NPAS3-209ENST00000551008 CD36P16671 472 aa10.05□□□□□ -0.8
NPAS3-209ENST00000551008 SLURP1P55000 103 aa10.05□□□□□ -0.8
NPAS3-209ENST00000551008 RPL30P62888 115 aaKnown RBP10.05□□□□□ -0.8
NPAS3-209ENST00000551008 MRPS15P82914 257 aaKnown RBP10.05□□□□□ -0.8
NPAS3-209ENST00000551008 DGCR2P98153 550 aa10.05□□□□□ -0.8
NPAS3-209ENST00000551008 EIF4EBP1Q13541 118 aaPredicted RBP10.05□□□□□ -0.8
NPAS3-209ENST00000551008 C9orf66Q5T8R8 295 aa10.05□□□□□ -0.8
NPAS3-209ENST00000551008 TCTEX1D1Q8N7M0 179 aa10.05□□□□□ -0.8
NPAS3-209ENST00000551008 DPF1Q92782 380 aa10.05□□□□□ -0.8
NPAS3-209ENST00000551008 DLX4Q92988 240 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms