RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 BAP18Q8IXM2 172 aa0.71□□□□□ -2.3
CCDC38-206ENST00000548771 CLDND2Q8NHS1 167 aa0.71□□□□□ -2.3
CCDC38-206ENST00000548771 TLCD1Q96CP7 247 aa0.71□□□□□ -2.3
CCDC38-206ENST00000548771 Q96M85 177 aa0.71□□□□□ -2.3
CCDC38-206ENST00000548771 GNB1LQ9BYB4 327 aa0.71□□□□□ -2.3
CCDC38-206ENST00000548771 METTL9Q9H1A3 318 aa0.71□□□□□ -2.3
CCDC38-206ENST00000548771 NRBP2Q9NSY0 501 aa0.71□□□□□ -2.3
CCDC38-206ENST00000548771 CHMP5Q9NZZ3 219 aa0.71□□□□□ -2.3
CCDC38-206ENST00000548771 ANGPT4Q9Y264 503 aa0.71□□□□□ -2.3
CCDC38-206ENST00000548771 SCN9AQ15858 1988 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 GRIN2BQ13224 1484 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 CECR2Q9BXF3 1484 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 TRAV8-1A0A0A6YYK1 113 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 IGKV3D-7A0A0C4DH55 119 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 IGKV3OR2-268A0A0C4DH90 116 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 TRBV6-5A0A0K0K1A5 114 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 DAPL1A0PJW8 107 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 SYNGR1O43759 233 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 KLRC4O43908 158 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 ZNF737O75373 536 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 NPYP01303 97 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 GRPRP30550 384 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 GABRA2P47869 451 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 TMEM267Q0VDI3 215 aaPredicted RBP0.7□□□□□ -2.3
CCDC38-206ENST00000548771 AADACL4Q5VUY2 407 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 COPS6Q7L5N1 327 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 SPATA12Q7Z6I5 190 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 LRRC34Q8IZ02 419 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 PACRGLQ8N7B6 248 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 OR51T1Q8NGJ9 327 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 OR13C8Q8NGS7 320 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 SMCR5Q8TEV8 140 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 SLC7A6Q92536 515 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 LRRC45Q96CN5 670 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 DOHHQ9BU89 302 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 VCX3BQ9H321 246 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 CST9LQ9H4G1 147 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 CHD2O14647 1828 aaKnown RBP0.7□□□□□ -2.3
CCDC38-206ENST00000548771 RIMBP3CA6NJZ7 1639 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 RIMBP3BA6NNM3 1639 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 RIMBP3Q9UFD9 1639 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 NPATQ14207 1427 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 HECW2Q9P2P5 1572 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 UTRNP46939 3433 aa0.7□□□□□ -2.3
CCDC38-206ENST00000548771 DISP1Q96F81 1524 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 MEIKINA0A087WXM9 373 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 METTL15A6NJ78 407 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 F8W036 122 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 CRPP02741 224 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 KDELR2P33947 212 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 IFNGR2P38484 337 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 AKR1C3P42330 323 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 RPL27AP46776 148 aaKnown RBP0.69□□□□□ -2.3
CCDC38-206ENST00000548771 RBM11P57052 281 aaKnown RBP0.69□□□□□ -2.3
CCDC38-206ENST00000548771 H2BFSP57053 126 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 SMAGPQ0VAQ4 97 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 USF2Q15853 346 aaPredicted RBP0.69□□□□□ -2.3
CCDC38-206ENST00000548771 SLC36A2Q495M3 483 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 DNAL1Q4LDG9 190 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 LCN8Q6JVE9 175 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 ZNF705AQ6ZN79 300 aaPredicted RBP0.69□□□□□ -2.3
CCDC38-206ENST00000548771 KTN1-AS1Q86SY8 53 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 C1orf174Q8IYL3 243 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 BLIDQ8IZY5 108 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 OR5AK3PQ8NH89 298 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 STOML3Q8TAV4 291 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 Q8WTZ3 238 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 ASB17Q8WXJ9 295 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 ZNF75CPQ92670 426 aaPredicted RBP0.69□□□□□ -2.3
CCDC38-206ENST00000548771 C12orf43Q96C57 262 aaKnown RBP0.69□□□□□ -2.3
CCDC38-206ENST00000548771 TMA16Q96EY4 203 aaKnown RBP0.69□□□□□ -2.3
CCDC38-206ENST00000548771 CPNE2Q96FN4 548 aaPredicted RBP0.69□□□□□ -2.3
CCDC38-206ENST00000548771 SFRP2Q96HF1 295 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 MED10Q9BTT4 135 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 TMEM222Q9H0R3 208 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 PARVAQ9NVD7 372 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 EMC3Q9P0I2 261 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 DSCAMO60469 2012 aa0.69□□□□□ -2.3
CCDC38-206ENST00000548771 CC2D2AQ9P2K1 1620 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 IGKV3-7A0A075B6H7 116 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 ZNF879B4DU55 563 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 GOLGA8RI6L899 631 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 M0R381 172 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 ADAP1O75689 374 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 LINC00614P0C842 121 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 IL9P15248 144 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 GPX2P18283 190 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 CD79BP40259 229 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 ETV1P50549 477 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 TMEM33P57088 247 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 HPCAP84074 193 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 ANGPT1Q15389 498 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 ZNHIT3Q15649 155 aaPredicted RBP0.68□□□□□ -2.3
CCDC38-206ENST00000548771 NNATQ16517 81 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 ERCC6L2Q5T890 1561 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 C17orf78Q8N4C9 275 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 OR52E4Q8NGH9 312 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 MS4A6EQ96DS6 147 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 RBP7Q96R05 134 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 NMNAT3Q96T66 252 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms