RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 TRAV8-7A0A075B6U6 113 aa10.07□□□□□ -0.8
CCDC59-202ENST00000547758 C2orf70A6NJV1 201 aa10.07□□□□□ -0.8
CCDC59-202ENST00000547758 SAC3D1A6NKF1 404 aa10.07□□□□□ -0.8
CCDC59-202ENST00000547758 ITGB1BP1O14713 200 aa10.07□□□□□ -0.8
CCDC59-202ENST00000547758 APOA2P02652 100 aa10.07□□□□□ -0.8
CCDC59-202ENST00000547758 EDN2P20800 178 aa10.07□□□□□ -0.8
CCDC59-202ENST00000547758 CAPGP40121 348 aa10.07□□□□□ -0.8
CCDC59-202ENST00000547758 ZNF383Q8NA42 475 aa10.07□□□□□ -0.8
CCDC59-202ENST00000547758 OR52I1Q8NGK6 324 aa10.07□□□□□ -0.8
CCDC59-202ENST00000547758 SULT4A1Q9BR01 284 aa10.07□□□□□ -0.8
CCDC59-202ENST00000547758 AMBNQ9NP70 447 aa10.07□□□□□ -0.8
CCDC59-202ENST00000547758 ABCA13Q86UQ4 5058 aa10.07□□□□□ -0.8
CCDC59-202ENST00000547758 DNAH2Q9P225 4427 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 TRBV5-5A0A0J9YX44 114 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 PROP1O75360 226 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 IGLV2-23P01705 113 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 LIMS3P0CW19 117 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 LIMS4P0CW20 117 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 APELAP0DMC3 54 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 FOLR2P14207 255 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 GABRB1P18505 474 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 ATF4P18848 351 aaPredicted RBP10.06□□□□□ -0.8
CCDC59-202ENST00000547758 BMI1P35226 326 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 LINC00205P59089 165 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 EXOSC2Q13868 293 aaKnown RBP10.06□□□□□ -0.8
CCDC59-202ENST00000547758 ADAD2Q8NCV1 583 aaKnown RBP10.06□□□□□ -0.8
CCDC59-202ENST00000547758 FAM46BQ96A09 425 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 SMIM19Q96E16 107 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 CENPNQ96H22 339 aaPredicted RBP10.06□□□□□ -0.8
CCDC59-202ENST00000547758 PHB2Q99623 299 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 C11orf54Q9H0W9 315 aaPredicted RBP10.06□□□□□ -0.8
CCDC59-202ENST00000547758 ZNF230Q9UIE0 474 aaPredicted RBP10.06□□□□□ -0.8
CCDC59-202ENST00000547758 TP53TG1Q9Y2A0 90 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 ORC6Q9Y5N6 252 aa10.06□□□□□ -0.8
CCDC59-202ENST00000547758 MSGN1A6NI15 193 aa10.05□□□□□ -0.8
CCDC59-202ENST00000547758 FAM223BA6NKX1 122 aa10.05□□□□□ -0.8
CCDC59-202ENST00000547758 ALPLP05186 524 aa10.05□□□□□ -0.8
CCDC59-202ENST00000547758 CRYGBP07316 175 aa10.05□□□□□ -0.8
CCDC59-202ENST00000547758 H2AFB1P0C5Y9 115 aa10.05□□□□□ -0.8
CCDC59-202ENST00000547758 H2AFB2P0C5Z0 115 aa10.05□□□□□ -0.8
CCDC59-202ENST00000547758 RHOGP84095 191 aa10.05□□□□□ -0.8
CCDC59-202ENST00000547758 ZIK1Q3SY52 487 aaPredicted RBP10.05□□□□□ -0.8
CCDC59-202ENST00000547758 ZNF880Q6PDB4 577 aa10.05□□□□□ -0.8
CCDC59-202ENST00000547758 FAM223AQ8IWN6 122 aa10.05□□□□□ -0.8
CCDC59-202ENST00000547758 OR52B4Q8NGK2 314 aa10.05□□□□□ -0.8
CCDC59-202ENST00000547758 KCNG3Q8TAE7 436 aa10.05□□□□□ -0.8
CCDC59-202ENST00000547758 SLC7A6OSQ96CW6 309 aaPredicted RBP10.05□□□□□ -0.8
CCDC59-202ENST00000547758 NEDD4LQ96PU5 975 aa10.05□□□□□ -0.8
CCDC59-202ENST00000547758 AKIP1Q9NQ31 210 aa10.05□□□□□ -0.8
CCDC59-202ENST00000547758 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.04□□□□□ -0.8
CCDC59-202ENST00000547758 SPRY2O43597 315 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 TUSC2O75896 110 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 NAPSAO96009 420 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 OR9G9P0C7N8 305 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 ATP5G2Q06055 141 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 Q499Y3 187 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 MOB1BQ7L9L4 216 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 C6orf201Q7Z4U5 140 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 CDH26Q8IXH8 852 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 TMEM61Q8N0U2 210 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 SETD6Q8TBK2 473 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 PHLDA1Q8WV24 401 aaPredicted RBP10.04□□□□□ -0.8
CCDC59-202ENST00000547758 THRSPQ92748 146 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 Q96MT0 163 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 FAAP24Q9BTP7 215 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 CHMP1AQ9HD42 196 aaPredicted RBP10.04□□□□□ -0.8
CCDC59-202ENST00000547758 SLC35D1Q9NTN3 355 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 MRPS18AQ9NVS2 196 aaKnown RBP10.04□□□□□ -0.8
CCDC59-202ENST00000547758 OR1A1Q9P1Q5 309 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 SELENOKQ9Y6D0 94 aa10.04□□□□□ -0.8
CCDC59-202ENST00000547758 PPP5D1E7EU14 171 aa10.03□□□□□ -0.8
CCDC59-202ENST00000547758 OGG1O15527 345 aa10.03□□□□□ -0.8
CCDC59-202ENST00000547758 PRH1P02810 166 aa10.03□□□□□ -0.8
CCDC59-202ENST00000547758 ZBTB25P24278 435 aa10.03□□□□□ -0.8
CCDC59-202ENST00000547758 CEACAM6P40199 344 aa10.03□□□□□ -0.8
CCDC59-202ENST00000547758 ZNF45Q02386 682 aa10.03□□□□□ -0.8
CCDC59-202ENST00000547758 DEFB135Q30KP9 77 aa10.03□□□□□ -0.8
CCDC59-202ENST00000547758 OR2G6Q5TZ20 316 aa10.03□□□□□ -0.8
CCDC59-202ENST00000547758 ZNF57Q68EA5 555 aaPredicted RBP10.03□□□□□ -0.8
CCDC59-202ENST00000547758 Q6ZWC4 215 aa10.03□□□□□ -0.8
CCDC59-202ENST00000547758 TMEM217Q8N7C4 229 aa10.03□□□□□ -0.8
CCDC59-202ENST00000547758 CACNG8Q8WXS5 425 aa10.03□□□□□ -0.8
CCDC59-202ENST00000547758 HARBI1Q96MB7 349 aa10.03□□□□□ -0.8
CCDC59-202ENST00000547758 ZNF221Q9UK13 617 aa10.03□□□□□ -0.8
CCDC59-202ENST00000547758 RPL36Q9Y3U8 105 aaKnown RBP10.03□□□□□ -0.8
CCDC59-202ENST00000547758 DYNC1H1Q14204 4646 aaKnown RBP10.02□□□□□ -0.8
CCDC59-202ENST00000547758 TRBV5-7A0A0A0MS05 114 aa10.02□□□□□ -0.81
CCDC59-202ENST00000547758 TRBV9A0A0B4J1U6 114 aa10.02□□□□□ -0.81
CCDC59-202ENST00000547758 A0A1W2PPK0 400 aa10.02□□□□□ -0.81
CCDC59-202ENST00000547758 M0R1X1 148 aa10.02□□□□□ -0.81
CCDC59-202ENST00000547758 LGALS9O00182 355 aa10.02□□□□□ -0.81
CCDC59-202ENST00000547758 EI24O14681 340 aa10.02□□□□□ -0.81
CCDC59-202ENST00000547758 MPPED1O15442 326 aa10.02□□□□□ -0.81
CCDC59-202ENST00000547758 ATP8B1O43520 1251 aa10.02□□□□□ -0.81
CCDC59-202ENST00000547758 HLA-AP01891 365 aaKnown RBP10.02□□□□□ -0.81
CCDC59-202ENST00000547758 CBLN1P23435 193 aa10.02□□□□□ -0.81
CCDC59-202ENST00000547758 ETV1P50549 477 aa10.02□□□□□ -0.81
CCDC59-202ENST00000547758 APOC4P55056 127 aa10.02□□□□□ -0.81
CCDC59-202ENST00000547758 RPS11P62280 158 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCDC59-202ENST00000547758 MRGPRG-AS1Q2M3A8 158 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms