RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 EIF4EBP1Q13541 118 aaPredicted RBP16.56■□□□□ 0.24
SCARB1-211ENST00000546215 MSMO1Q15800 293 aa16.56■□□□□ 0.24
SCARB1-211ENST00000546215 STEAP1BQ6NZ63 245 aa16.56■□□□□ 0.24
SCARB1-211ENST00000546215 SRRQ9GZT4 340 aa16.56■□□□□ 0.24
SCARB1-211ENST00000546215 RANBP3Q9H6Z4 567 aaPredicted RBP16.56■□□□□ 0.24
SCARB1-211ENST00000546215 TAS2R8Q9NYW2 309 aa16.56■□□□□ 0.24
SCARB1-211ENST00000546215 MOB4Q9Y3A3 225 aa16.56■□□□□ 0.24
SCARB1-211ENST00000546215 LINC00473A8K010 186 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 TMEM17Q86X19 198 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 TRIM63Q969Q1 353 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 C16orf95Q9H693 158 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 WASHC3Q9Y3C0 194 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 TENM1Q9UKZ4 2725 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 ANKRD20A5PA0PJZ0 165 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 M0QZK8 103 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 RAB3DO95716 219 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 IFNA6P05013 189 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 GNRHRP30968 328 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 THBS3P49746 956 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 F2RL1P55085 397 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 FOXL1Q12952 345 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 AADACL3Q5VUY0 350 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 C11orf88Q6PI97 169 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 Q6ZS46 218 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 ARRDC1Q8N5I2 433 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 OR4C13Q8NGP0 309 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 OR4F5Q8NH21 305 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 DDB2Q92466 427 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 ADTRPQ96IZ2 230 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 FXYD6Q9H0Q3 95 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 PTTG2Q9NZH5 202 aa16.55■□□□□ 0.24
SCARB1-211ENST00000546215 H7C2Y5 167 aa16.54■□□□□ 0.24
SCARB1-211ENST00000546215 FGF16O43320 207 aa16.54■□□□□ 0.24
SCARB1-211ENST00000546215 IGKV1-16P04430 117 aa16.54■□□□□ 0.24
SCARB1-211ENST00000546215 MDKP21741 143 aaPredicted RBP16.54■□□□□ 0.24
SCARB1-211ENST00000546215 COMPP49747 757 aaPredicted RBP16.54■□□□□ 0.24
SCARB1-211ENST00000546215 ZNF818PQ6ZRF7 136 aa16.54■□□□□ 0.24
SCARB1-211ENST00000546215 LINC00299Q6ZSB3 139 aa16.54■□□□□ 0.24
SCARB1-211ENST00000546215 LHFPL1Q86WI0 220 aa16.54■□□□□ 0.24
SCARB1-211ENST00000546215 C5orf56Q8N8D9 126 aa16.54■□□□□ 0.24
SCARB1-211ENST00000546215 ZBTB34Q8NCN2 500 aa16.54■□□□□ 0.24
SCARB1-211ENST00000546215 OR8H1Q8NGG4 311 aa16.54■□□□□ 0.24
SCARB1-211ENST00000546215 LINC01006Q8NI28 216 aa16.54■□□□□ 0.24
SCARB1-211ENST00000546215 ZNF702PQ9H963 129 aa16.54■□□□□ 0.24
SCARB1-211ENST00000546215 SLC35D1Q9NTN3 355 aa16.54■□□□□ 0.24
SCARB1-211ENST00000546215 NCBP2LA6PVI3 153 aaKnown RBP16.53■□□□□ 0.24
SCARB1-211ENST00000546215 APOA2P02652 100 aa16.53■□□□□ 0.24
SCARB1-211ENST00000546215 ZNF735P0CB33 412 aa16.53■□□□□ 0.24
SCARB1-211ENST00000546215 AKAIN1P0CW23 69 aa16.53■□□□□ 0.24
SCARB1-211ENST00000546215 RPL30P62888 115 aaKnown RBP16.53■□□□□ 0.24
SCARB1-211ENST00000546215 TAGLNQ01995 201 aaKnown RBP16.53■□□□□ 0.24
SCARB1-211ENST00000546215 ABCA11PQ4W5N1 156 aa16.53■□□□□ 0.24
SCARB1-211ENST00000546215 FAAP20Q6NZ36 180 aa16.53■□□□□ 0.24
SCARB1-211ENST00000546215 PDPNQ86YL7 162 aa16.53■□□□□ 0.24
SCARB1-211ENST00000546215 Q8N2B8 174 aa16.53■□□□□ 0.24
SCARB1-211ENST00000546215 Q8N9W7 124 aa16.53■□□□□ 0.24
SCARB1-211ENST00000546215 GPHA2Q96T91 129 aa16.53■□□□□ 0.24
SCARB1-211ENST00000546215 CNTFRP26992 372 aa16.52■□□□□ 0.24
SCARB1-211ENST00000546215 MEF2DQ14814 521 aa16.52■□□□□ 0.24
SCARB1-211ENST00000546215 AWAT1Q58HT5 328 aa16.52■□□□□ 0.24
SCARB1-211ENST00000546215 ZNF66Q6ZN08 573 aa16.52■□□□□ 0.24
SCARB1-211ENST00000546215 FAM71E2Q8N5Q1 922 aa16.52■□□□□ 0.24
SCARB1-211ENST00000546215 BVESQ8NE79 360 aa16.52■□□□□ 0.24
SCARB1-211ENST00000546215 OR4C16Q8NGL9 310 aa16.52■□□□□ 0.24
SCARB1-211ENST00000546215 SDHCQ99643 169 aaPredicted RBP16.52■□□□□ 0.24
SCARB1-211ENST00000546215 HSD17B10Q99714 261 aaKnown RBP16.52■□□□□ 0.24
SCARB1-211ENST00000546215 RNF5Q99942 180 aa16.52■□□□□ 0.24
SCARB1-211ENST00000546215 PRSS22Q9GZN4 317 aa16.52■□□□□ 0.24
SCARB1-211ENST00000546215 BEX1Q9HBH7 125 aa16.52■□□□□ 0.24
SCARB1-211ENST00000546215 MMP24Q9Y5R2 645 aa16.52■□□□□ 0.24
SCARB1-211ENST00000546215 STAB1Q9NY15 2570 aa16.52■□□□□ 0.24
SCARB1-211ENST00000546215 SH2D7A6NKC9 451 aaPredicted RBP16.51■□□□□ 0.23
SCARB1-211ENST00000546215 TNFSF12O43508 249 aa16.51■□□□□ 0.23
SCARB1-211ENST00000546215 UCP3P55916 312 aa16.51■□□□□ 0.23
SCARB1-211ENST00000546215 ZNF45Q02386 682 aa16.51■□□□□ 0.23
SCARB1-211ENST00000546215 MMDQ15546 238 aa16.51■□□□□ 0.23
SCARB1-211ENST00000546215 KCTD9Q7L273 389 aa16.51■□□□□ 0.23
SCARB1-211ENST00000546215 MFSD4AQ8N468 514 aa16.51■□□□□ 0.23
SCARB1-211ENST00000546215 GDPD1Q8N9F7 314 aa16.51■□□□□ 0.23
SCARB1-211ENST00000546215 NPBQ8NG41 125 aa16.51■□□□□ 0.23
SCARB1-211ENST00000546215 SIGLEC9Q9Y336 463 aa16.51■□□□□ 0.23
SCARB1-211ENST00000546215 CLPSL1A2RUU4 121 aa16.51■□□□□ 0.23
SCARB1-211ENST00000546215 KLF9Q13886 244 aaPredicted RBP16.51■□□□□ 0.23
SCARB1-211ENST00000546215 TERB2Q8NHR7 220 aa16.51■□□□□ 0.23
SCARB1-211ENST00000546215 BORCS5Q969J3 196 aa16.51■□□□□ 0.23
SCARB1-211ENST00000546215 FLYWCH2Q96CP2 140 aaKnown RBP16.51■□□□□ 0.23
SCARB1-211ENST00000546215 AKIP1Q9NQ31 210 aa16.51■□□□□ 0.23
SCARB1-211ENST00000546215 A0A1B0GUS0 222 aa16.5■□□□□ 0.23
SCARB1-211ENST00000546215 NDUFA3O95167 84 aa16.5■□□□□ 0.23
SCARB1-211ENST00000546215 RRASP10301 218 aa16.5■□□□□ 0.23
SCARB1-211ENST00000546215 BRWD1-AS2P59051 145 aa16.5■□□□□ 0.23
SCARB1-211ENST00000546215 BAK1Q16611 211 aa16.5■□□□□ 0.23
SCARB1-211ENST00000546215 RTL8BQ17RB0 113 aa16.5■□□□□ 0.23
SCARB1-211ENST00000546215 OR2T6Q8NHC8 308 aa16.5■□□□□ 0.23
SCARB1-211ENST00000546215 RSRP1Q9BUV0 290 aa16.5■□□□□ 0.23
SCARB1-211ENST00000546215 PRELID3BQ9Y3B1 194 aa16.5■□□□□ 0.23
SCARB1-211ENST00000546215 ANK2Q01484 3957 aa16.49■□□□□ 0.23
SCARB1-211ENST00000546215 NBR2O15453 112 aa16.49■□□□□ 0.23
SCARB1-211ENST00000546215 RPS16P62249 146 aaKnown RBP16.49■□□□□ 0.23
SCARB1-211ENST00000546215 SCGB2B2Q4G0G5 96 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms