RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 ST8SIA5O15466 376 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
LDLR-204ENST00000545707 P0C879 139 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 CD59P13987 128 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 GZMHP20718 246 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 CNEP1R1Q8N9A8 125 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 RHOVQ96L33 236 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 PRDM13Q9H4Q3 707 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.22□□□□□ -0.29
LDLR-204ENST00000545707 NAT8Q9UHE5 227 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 IQCF6A8MYZ5 107 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 FAM90A26D6RGX4 464 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 PTBP3O95758 552 aaKnown RBP13.22□□□□□ -0.29
LDLR-204ENST00000545707 IGHV3-13P01766 116 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 IGHV3-7P01780 117 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 OPN1MWP04001 364 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 OPN1MW2P0DN77 364 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 OPN1MW3P0DN78 364 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 FABP6P51161 128 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 RPL23P62829 140 aaKnown RBP13.22□□□□□ -0.29
LDLR-204ENST00000545707 GAMTQ14353 236 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 OR13A1Q8NGR1 328 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 OR4X1Q8NH49 305 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 NINJ1Q92982 152 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 PARLQ9H300 379 aa13.22□□□□□ -0.29
LDLR-204ENST00000545707 TRBV24-1A0A075B6N3 115 aa13.21□□□□□ -0.29
LDLR-204ENST00000545707 NDUFS6O75380 124 aaKnown RBP13.21□□□□□ -0.29
LDLR-204ENST00000545707 EGR1P18146 543 aa13.21□□□□□ -0.29
LDLR-204ENST00000545707 EIF4EBP1Q13541 118 aaPredicted RBP13.21□□□□□ -0.29
LDLR-204ENST00000545707 MSMO1Q15800 293 aa13.21□□□□□ -0.29
LDLR-204ENST00000545707 BSXQ3C1V8 233 aa13.21□□□□□ -0.29
LDLR-204ENST00000545707 Q3ZCU0 254 aa13.21□□□□□ -0.29
LDLR-204ENST00000545707 GCSAMLQ5JQS6 135 aa13.21□□□□□ -0.29
LDLR-204ENST00000545707 OR10P1Q8NGE3 313 aa13.21□□□□□ -0.29
LDLR-204ENST00000545707 RAB24Q969Q5 203 aa13.21□□□□□ -0.29
LDLR-204ENST00000545707 AURKAIP1Q9NWT8 199 aaPredicted RBP13.21□□□□□ -0.29
LDLR-204ENST00000545707 PSG11Q9UQ72 335 aa13.21□□□□□ -0.29
LDLR-204ENST00000545707 LAMP3Q9UQV4 416 aa13.21□□□□□ -0.29
LDLR-204ENST00000545707 PAGE4O60829 102 aa13.21□□□□□ -0.3
LDLR-204ENST00000545707 KBTBD11O94819 623 aa13.21□□□□□ -0.3
LDLR-204ENST00000545707 PSMB3P49720 205 aa13.21□□□□□ -0.3
LDLR-204ENST00000545707 CYP2G1PQ6ZSU1 146 aa13.21□□□□□ -0.3
LDLR-204ENST00000545707 H2BFWTQ7Z2G1 175 aa13.21□□□□□ -0.3
LDLR-204ENST00000545707 OR10A7Q8NGE5 316 aa13.21□□□□□ -0.3
LDLR-204ENST00000545707 TRIB1Q96RU8 372 aa13.21□□□□□ -0.3
LDLR-204ENST00000545707 TMEM147Q9BVK8 224 aa13.21□□□□□ -0.3
LDLR-204ENST00000545707 PARD6GQ9BYG4 376 aaPredicted RBP13.21□□□□□ -0.3
LDLR-204ENST00000545707 HES4Q9HCC6 221 aa13.21□□□□□ -0.3
LDLR-204ENST00000545707 OOEPA6NGQ2 149 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 ZNF729A6NN14 1252 aaPredicted RBP13.2□□□□□ -0.3
LDLR-204ENST00000545707 PFN1P07737 140 aaKnown RBP13.2□□□□□ -0.3
LDLR-204ENST00000545707 TGFBR3Q03167 851 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 GABRA6Q16445 453 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 ACSF3Q4G176 576 aaPredicted RBP13.2□□□□□ -0.3
LDLR-204ENST00000545707 SSX9Q7RTT3 188 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 LURAP1LQ8IV03 231 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 FER1L6-AS2Q96M78 137 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 NPCDR1Q9BY65 106 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 PRO1933Q9H354 126 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 CTXND1A0A1B0GTU2 59 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 CDX4O14627 284 aaPredicted RBP13.2□□□□□ -0.3
LDLR-204ENST00000545707 ZNF883P0CG24 379 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 COL10A1Q03692 680 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 EDDM3AQ14507 147 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 ACP7Q6ZNF0 438 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 S100PBPQ96BU1 408 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 GMPPAQ96IJ6 420 aaPredicted RBP13.2□□□□□ -0.3
LDLR-204ENST00000545707 PACRGQ96M98 296 aaPredicted RBP13.2□□□□□ -0.3
LDLR-204ENST00000545707 HIST1H2BLQ99880 126 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 PCGF1Q9BSM1 259 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 CTDSP1Q9GZU7 261 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 FAM234AQ9H0X4 552 aa13.2□□□□□ -0.3
LDLR-204ENST00000545707 ELOA3CA0A087WX78 387 aaPredicted RBP13.19□□□□□ -0.3
LDLR-204ENST00000545707 C1QTNF9BB2RNN3 333 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 CRYAAP02489 173 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 CATR1Q13166 79 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 HES3Q5TGS1 186 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 WDR82Q6UXN9 313 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 CENPVQ7Z7K6 275 aaPredicted RBP13.19□□□□□ -0.3
LDLR-204ENST00000545707 TIMM9Q9Y5J7 89 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 SMG1Q96Q15 3661 aaKnown RBP13.19□□□□□ -0.3
LDLR-204ENST00000545707 A0A1W2PPQ1 181 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 HIST1H1BP16401 226 aaKnown RBP13.19□□□□□ -0.3
LDLR-204ENST00000545707 NPPCP23582 126 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 COL8A2P25067 703 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 GALR1P47211 349 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 SOX8P57073 446 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 SRSF6Q13247 344 aaKnown RBP13.19□□□□□ -0.3
LDLR-204ENST00000545707 PRSS8Q16651 343 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 SLC35E4Q6ICL7 350 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 ALKBH2Q6NS38 261 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 VWA1Q6PCB0 445 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 FIP1L1Q6UN15 594 aaKnown RBP13.19□□□□□ -0.3
LDLR-204ENST00000545707 OR51G1Q8NGK1 321 aa13.19□□□□□ -0.3
LDLR-204ENST00000545707 QTRT1Q9BXR0 403 aaKnown RBP13.19□□□□□ -0.3
LDLR-204ENST00000545707 TRAV38-1A0A0B4J264 116 aa13.18□□□□□ -0.3
LDLR-204ENST00000545707 H7BYZ3 331 aa13.18□□□□□ -0.3
LDLR-204ENST00000545707 CLDN14O95500 239 aa13.18□□□□□ -0.3
LDLR-204ENST00000545707 UBE2G2P60604 165 aa13.18□□□□□ -0.3
LDLR-204ENST00000545707 P2RY6Q15077 328 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms