RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 IGSF11Q5DX21 431 aa16.35■□□□□ 0.21
SCARB1-210ENST00000545493 OR10R2Q8NGX6 335 aa16.35■□□□□ 0.21
SCARB1-210ENST00000545493 OR2D2Q9H210 308 aa16.35■□□□□ 0.21
SCARB1-210ENST00000545493 ZNF221Q9UK13 617 aa16.35■□□□□ 0.21
SCARB1-210ENST00000545493 BET1O15155 118 aa16.34■□□□□ 0.21
SCARB1-210ENST00000545493 APOA2P02652 100 aa16.34■□□□□ 0.21
SCARB1-210ENST00000545493 LGALS1P09382 135 aaKnown RBP16.34■□□□□ 0.21
SCARB1-210ENST00000545493 GSTT2P0CG29 244 aa16.34■□□□□ 0.21
SCARB1-210ENST00000545493 GSTT2BP0CG30 244 aa16.34■□□□□ 0.21
SCARB1-210ENST00000545493 HIST1H1DP16402 221 aaKnown RBP16.34■□□□□ 0.21
SCARB1-210ENST00000545493 RAB3BP20337 219 aa16.34■□□□□ 0.21
SCARB1-210ENST00000545493 RANBP1P43487 201 aa16.34■□□□□ 0.21
SCARB1-210ENST00000545493 SERPINB10P48595 397 aa16.34■□□□□ 0.21
SCARB1-210ENST00000545493 PPP1R27Q86WC6 154 aa16.34■□□□□ 0.21
SCARB1-210ENST00000545493 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.34■□□□□ 0.21
SCARB1-210ENST00000545493 ZNF230Q9UIE0 474 aaPredicted RBP16.34■□□□□ 0.21
SCARB1-210ENST00000545493 A0A075B6Q4 140 aa16.33■□□□□ 0.2
SCARB1-210ENST00000545493 IGHV4OR15-8A0A075B7B6 117 aa16.33■□□□□ 0.2
SCARB1-210ENST00000545493 A0A087WW49 117 aa16.33■□□□□ 0.2
SCARB1-210ENST00000545493 TRBV6-7A0A0A0MS04 114 aa16.33■□□□□ 0.2
SCARB1-210ENST00000545493 RAB6AP20340 208 aa16.33■□□□□ 0.2
SCARB1-210ENST00000545493 SLURP1P55000 103 aa16.33■□□□□ 0.2
SCARB1-210ENST00000545493 MRPS15P82914 257 aaKnown RBP16.33■□□□□ 0.2
SCARB1-210ENST00000545493 C22orf42Q6IC83 251 aa16.33■□□□□ 0.2
SCARB1-210ENST00000545493 LFNGQ8NES3 379 aa16.33■□□□□ 0.2
SCARB1-210ENST00000545493 DCUN1D4Q92564 292 aa16.33■□□□□ 0.2
SCARB1-210ENST00000545493 ARPC1AQ92747 370 aa16.33■□□□□ 0.2
SCARB1-210ENST00000545493 TSNAXQ99598 290 aaKnown RBP16.33■□□□□ 0.2
SCARB1-210ENST00000545493 SLC35D1Q9NTN3 355 aa16.33■□□□□ 0.2
SCARB1-210ENST00000545493 SDHAF2Q9NX18 166 aa16.33■□□□□ 0.2
SCARB1-210ENST00000545493 SMIM30A4D0T7 59 aa16.32■□□□□ 0.2
SCARB1-210ENST00000545493 ARPC1BO15143 372 aaKnown RBP16.32■□□□□ 0.2
SCARB1-210ENST00000545493 SLC25A17O43808 307 aa16.32■□□□□ 0.2
SCARB1-210ENST00000545493 DIRAS3O95661 229 aa16.32■□□□□ 0.2
SCARB1-210ENST00000545493 IGLV2-23P01705 113 aa16.32■□□□□ 0.2
SCARB1-210ENST00000545493 RPS16P62249 146 aaKnown RBP16.32■□□□□ 0.2
SCARB1-210ENST00000545493 AKIRIN2Q53H80 203 aa16.32■□□□□ 0.2
SCARB1-210ENST00000545493 ACTBL2Q562R1 376 aa16.32■□□□□ 0.2
SCARB1-210ENST00000545493 UBE2UQ5VVX9 321 aa16.32■□□□□ 0.2
SCARB1-210ENST00000545493 PYHIN1Q6K0P9 492 aa16.32■□□□□ 0.2
SCARB1-210ENST00000545493 UNQ5815/PRO19632Q6UWF5 114 aa16.32■□□□□ 0.2
SCARB1-210ENST00000545493 ZNF562Q6V9R5 426 aa16.32■□□□□ 0.2
SCARB1-210ENST00000545493 ZNF256Q9Y2P7 627 aaPredicted RBP16.32■□□□□ 0.2
SCARB1-210ENST00000545493 LINC01619G3V211 115 aa16.31■□□□□ 0.2
SCARB1-210ENST00000545493 OVOL1O14753 267 aa16.31■□□□□ 0.2
SCARB1-210ENST00000545493 IGHV3-11P01762 117 aa16.31■□□□□ 0.2
SCARB1-210ENST00000545493 OR8U9P0C7N5 309 aa16.31■□□□□ 0.2
SCARB1-210ENST00000545493 GALP22466 123 aa16.31■□□□□ 0.2
SCARB1-210ENST00000545493 GADD45AP24522 165 aa16.31■□□□□ 0.2
SCARB1-210ENST00000545493 DLX4Q92988 240 aaPredicted RBP16.31■□□□□ 0.2
SCARB1-210ENST00000545493 FLYWCH2Q96CP2 140 aaKnown RBP16.31■□□□□ 0.2
SCARB1-210ENST00000545493 ELF5Q9UKW6 265 aaPredicted RBP16.31■□□□□ 0.2
SCARB1-210ENST00000545493 TENM3Q9P273 2699 aa16.3■□□□□ 0.2
SCARB1-210ENST00000545493 IGKV1D-8A0A087WSZ0 117 aa16.3■□□□□ 0.2
SCARB1-210ENST00000545493 ATP6V1G2O95670 118 aa16.3■□□□□ 0.2
SCARB1-210ENST00000545493 INSL3P51460 131 aa16.3■□□□□ 0.2
SCARB1-210ENST00000545493 TPPP2P59282 170 aa16.3■□□□□ 0.2
SCARB1-210ENST00000545493 TMEM267Q0VDI3 215 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-210ENST00000545493 OR10J5Q8NHC4 309 aa16.3■□□□□ 0.2
SCARB1-210ENST00000545493 GRPEL2Q8TAA5 225 aa16.3■□□□□ 0.2
SCARB1-210ENST00000545493 MS4A10Q96PG2 267 aa16.3■□□□□ 0.2
SCARB1-210ENST00000545493 MRPS14O60783 128 aaKnown RBP16.29■□□□□ 0.2
SCARB1-210ENST00000545493 CRYGBP07316 175 aa16.29■□□□□ 0.2
SCARB1-210ENST00000545493 FXYD3Q14802 87 aa16.29■□□□□ 0.2
SCARB1-210ENST00000545493 Q6ZS49 121 aa16.29■□□□□ 0.2
SCARB1-210ENST00000545493 SPARTQ8N0X7 666 aa16.29■□□□□ 0.2
SCARB1-210ENST00000545493 HARBI1Q96MB7 349 aa16.29■□□□□ 0.2
SCARB1-210ENST00000545493 SACSQ9NZJ4 4579 aa16.28■□□□□ 0.2
SCARB1-210ENST00000545493 PSMB9P28065 219 aa16.28■□□□□ 0.2
SCARB1-210ENST00000545493 PJVKQ0ZLH3 352 aa16.28■□□□□ 0.2
SCARB1-210ENST00000545493 ZNF429Q86V71 674 aa16.28■□□□□ 0.2
SCARB1-210ENST00000545493 RHOVQ96L33 236 aa16.28■□□□□ 0.2
SCARB1-210ENST00000545493 SLA2Q9H6Q3 261 aa16.28■□□□□ 0.2
SCARB1-210ENST00000545493 TXNL4BQ9NX01 149 aaKnown RBP16.28■□□□□ 0.2
SCARB1-210ENST00000545493 DYNC2H1Q8NCM8 4307 aaKnown RBP16.28■□□□□ 0.2
SCARB1-210ENST00000545493 SAP30O75446 220 aa16.27■□□□□ 0.2
SCARB1-210ENST00000545493 LY86O95711 162 aa16.27■□□□□ 0.2
SCARB1-210ENST00000545493 FGF9P31371 208 aaPredicted RBP16.27■□□□□ 0.2
SCARB1-210ENST00000545493 ARFRP1Q13795 201 aa16.27■□□□□ 0.2
SCARB1-210ENST00000545493 SRSF7Q16629 238 aaKnown RBP eCLIP16.27■□□□□ 0.23e-6■■■■□ 20.4
SCARB1-210ENST00000545493 MRGPRG-AS1Q2M3A8 158 aa16.27■□□□□ 0.2
SCARB1-210ENST00000545493 TMEM177Q53S58 311 aa16.27■□□□□ 0.2
SCARB1-210ENST00000545493 H1FOOQ8IZA3 346 aaPredicted RBP16.27■□□□□ 0.2
SCARB1-210ENST00000545493 POC5Q8NA72 575 aa16.27■□□□□ 0.2
SCARB1-210ENST00000545493 DDB2Q92466 427 aa16.27■□□□□ 0.2
SCARB1-210ENST00000545493 WWC2-AS2Q96NR7 200 aa16.27■□□□□ 0.2
SCARB1-210ENST00000545493 GINS4Q9BRT9 223 aa16.27■□□□□ 0.2
SCARB1-210ENST00000545493 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.27■□□□□ 0.2
SCARB1-210ENST00000545493 STARD9Q9P2P6 4700 aa16.27■□□□□ 0.19
SCARB1-210ENST00000545493 NBEAL2Q6ZNJ1 2754 aa16.26■□□□□ 0.19
SCARB1-210ENST00000545493 METTL21EPA6NDL7 271 aa16.26■□□□□ 0.19
SCARB1-210ENST00000545493 SRRM4A7MD48 611 aaKnown RBP16.26■□□□□ 0.19
SCARB1-210ENST00000545493 NOTOA8MTQ0 251 aa16.26■□□□□ 0.19
SCARB1-210ENST00000545493 TRGV3P03979 118 aa16.26■□□□□ 0.19
SCARB1-210ENST00000545493 DTYMKP23919 212 aa16.26■□□□□ 0.19
SCARB1-210ENST00000545493 BVESQ8NE79 360 aa16.26■□□□□ 0.19
SCARB1-210ENST00000545493 ATG5Q9H1Y0 275 aa16.26■□□□□ 0.19
SCARB1-210ENST00000545493 STUB1Q9UNE7 303 aa16.26■□□□□ 0.19
SCARB1-210ENST00000545493 LINC00473A8K010 186 aa16.25■□□□□ 0.19
SCARB1-210ENST00000545493 H3BUA1 57 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms