RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 GNB4Q9HAV0 340 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 METTL1Q9UBP6 276 aaKnown RBP12.57□□□□□ -0.4
DDX55-212ENST00000544738 FOXA2Q9Y261 457 aaPredicted RBP12.57□□□□□ -0.4
DDX55-212ENST00000544738 IGKV1-6A0A0C4DH72 117 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 TRDV1A0A1B0GX56 115 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 METTL21EPA6NDL7 271 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 FCN1O00602 326 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 FABP7O15540 132 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 SPDEFO95238 335 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 RAB3BP20337 219 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 RAB6AP20340 208 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 CD40LGP29965 261 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 RPS16P62249 146 aaKnown RBP12.56□□□□□ -0.4
DDX55-212ENST00000544738 NDPQ00604 133 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 PSG5Q15238 335 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 ZNF260Q3ZCT1 412 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 AKIRIN2Q53H80 203 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 DRAXINQ8NBI3 349 aaPredicted RBP12.56□□□□□ -0.4
DDX55-212ENST00000544738 OR10J5Q8NHC4 309 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 FLYWCH2Q96CP2 140 aaKnown RBP12.56□□□□□ -0.4
DDX55-212ENST00000544738 OR5B12Q96R08 314 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 SCOCQ9UIL1 159 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 GAB2Q9UQC2 676 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 KCNK7Q9Y2U2 307 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 FBXO7Q9Y3I1 522 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 SMAD5-AS1Q9Y6J3 95 aa12.56□□□□□ -0.4
DDX55-212ENST00000544738 LY86O95711 162 aa12.55□□□□□ -0.4
DDX55-212ENST00000544738 FCGR3AP08637 254 aa12.55□□□□□ -0.4
DDX55-212ENST00000544738 GABARAPL2P60520 117 aa12.55□□□□□ -0.4
DDX55-212ENST00000544738 TAGLNQ01995 201 aaKnown RBP12.55□□□□□ -0.4
DDX55-212ENST00000544738 ARL6IP1Q15041 203 aa12.55□□□□□ -0.4
DDX55-212ENST00000544738 OVCH2Q7RTZ1 564 aa12.55□□□□□ -0.4
DDX55-212ENST00000544738 PPP1R27Q86WC6 154 aa12.55□□□□□ -0.4
DDX55-212ENST00000544738 ZNF383Q8NA42 475 aa12.55□□□□□ -0.4
DDX55-212ENST00000544738 CLCC1Q96S66 551 aa12.55□□□□□ -0.4
DDX55-212ENST00000544738 CABLES2Q9BTV7 478 aa12.55□□□□□ -0.4
DDX55-212ENST00000544738 A3GALT2U3KPV4 340 aa12.55□□□□□ -0.4
DDX55-212ENST00000544738 TRBV6-7A0A0A0MS04 114 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 M0R1X1 148 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 RAB27BO00194 218 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 BET1O15155 118 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 SOX15O60248 233 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 IGKV1-16P04430 117 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 EGR2P11161 476 aaPredicted RBP12.54□□□□□ -0.4
DDX55-212ENST00000544738 HIST1H1DP16402 221 aaKnown RBP12.54□□□□□ -0.4
DDX55-212ENST00000544738 LGALS7P47929 136 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 OR10A3P58181 314 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 GNB1P62873 340 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 PLA2G7Q13093 441 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 SRSF7Q16629 238 aaKnown RBP eCLIP12.54□□□□□ -0.4
DDX55-212ENST00000544738 MOGAT2Q3SYC2 334 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 ACTBL2Q562R1 376 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 UNQ5815/PRO19632Q6UWF5 114 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 CITED4Q96RK1 184 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 SLA2Q9H6Q3 261 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 ZMAT4Q9H898 229 aa12.54□□□□□ -0.4
DDX55-212ENST00000544738 SHISA3A0PJX4 238 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 MFNGO00587 321 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 OVOL1O14753 267 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 LGALS1P09382 135 aaKnown RBP12.53□□□□□ -0.4
DDX55-212ENST00000544738 OR8U9P0C7N5 309 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 GSTT2P0CG29 244 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 GSTT2BP0CG30 244 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 GNB3P16520 340 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 TALDO1P37837 337 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 CBX3Q13185 183 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 IGSF11Q5DX21 431 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 C22orf42Q6IC83 251 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 ZNF429Q86V71 674 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 LFNGQ8NES3 379 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 OR2D2Q9H210 308 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 SLC35D1Q9NTN3 355 aa12.53□□□□□ -0.4
DDX55-212ENST00000544738 ZNF256Q9Y2P7 627 aaPredicted RBP12.53□□□□□ -0.4
DDX55-212ENST00000544738 PLECQ15149 4684 aaKnown RBP12.52□□□□□ -0.4
DDX55-212ENST00000544738 A0A075B6Q4 140 aa12.52□□□□□ -0.41
DDX55-212ENST00000544738 LINC01619G3V211 115 aa12.52□□□□□ -0.41
DDX55-212ENST00000544738 ARPC1BO15143 372 aaKnown RBP12.52□□□□□ -0.41
DDX55-212ENST00000544738 SLC25A17O43808 307 aa12.52□□□□□ -0.41
DDX55-212ENST00000544738 CA2P00918 260 aa12.52□□□□□ -0.41
DDX55-212ENST00000544738 FGF9P31371 208 aaPredicted RBP12.52□□□□□ -0.41
DDX55-212ENST00000544738 LINC00205P59089 165 aa12.52□□□□□ -0.41
DDX55-212ENST00000544738 ARFRP1Q13795 201 aa12.52□□□□□ -0.41
DDX55-212ENST00000544738 ASPHD1Q5U4P2 390 aa12.52□□□□□ -0.41
DDX55-212ENST00000544738 UBE2UQ5VVX9 321 aa12.52□□□□□ -0.41
DDX55-212ENST00000544738 Q6ZS49 121 aa12.52□□□□□ -0.41
DDX55-212ENST00000544738 DCUN1D4Q92564 292 aa12.52□□□□□ -0.41
DDX55-212ENST00000544738 FCGR1BQ92637 280 aa12.52□□□□□ -0.41
DDX55-212ENST00000544738 ARPC1AQ92747 370 aa12.52□□□□□ -0.41
DDX55-212ENST00000544738 GINS4Q9BRT9 223 aa12.52□□□□□ -0.41
DDX55-212ENST00000544738 FAM103A1Q9BTL3 118 aaKnown RBP12.52□□□□□ -0.41
DDX55-212ENST00000544738 Q9H521 79 aa12.52□□□□□ -0.41
DDX55-212ENST00000544738 RBM7Q9Y580 266 aaKnown RBP12.52□□□□□ -0.41
DDX55-212ENST00000544738 HERC2O95714 4834 aa12.51□□□□□ -0.41
DDX55-212ENST00000544738 RRASP10301 218 aa12.51□□□□□ -0.41
DDX55-212ENST00000544738 FXYD3Q14802 87 aa12.51□□□□□ -0.41
DDX55-212ENST00000544738 TPRA1Q86W33 373 aa12.51□□□□□ -0.41
DDX55-212ENST00000544738 TMEM68Q96MH6 324 aa12.51□□□□□ -0.41
DDX55-212ENST00000544738 YTHDF1Q9BYJ9 559 aaKnown RBP12.51□□□□□ -0.41
DDX55-212ENST00000544738 ATG5Q9H1Y0 275 aa12.51□□□□□ -0.41
DDX55-212ENST00000544738 SDHAF2Q9NX18 166 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms