RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 SFT2D2O95562 160 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 TGFAP01135 160 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 GAPDHP04406 335 aaKnown RBP7.74□□□□□ -1.17
YBX3-215ENST00000544504 ARG1P05089 322 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 RRASP10301 218 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 MMP9P14780 707 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 RPA2P15927 270 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 PI3P19957 117 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 COX7A1P24310 79 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 F2RP25116 425 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 ZNF134P52741 427 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 DHRS2Q13268 280 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 PPP1R1AQ13522 171 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 MIDNQ504T8 468 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 CCDC144NLQ6NUI1 221 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 TBC1D26Q86UD7 250 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 ADAD2Q8NCV1 583 aaKnown RBP7.74□□□□□ -1.17
YBX3-215ENST00000544504 SGMS2Q8NHU3 365 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 MSI2Q96DH6 328 aaKnown RBP7.74□□□□□ -1.17
YBX3-215ENST00000544504 ABHD14BQ96IU4 210 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 AIFM2Q9BRQ8 373 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 OR51J1Q9H342 316 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 C7orf69Q9H7B7 122 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 SIRT7Q9NRC8 400 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 SDHAF2Q9NX18 166 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 DPM3Q9P2X0 92 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 SHPKQ9UHJ6 478 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 TBL2Q9Y4P3 447 aaKnown RBP7.74□□□□□ -1.17
YBX3-215ENST00000544504 ALG5Q9Y673 324 aa7.74□□□□□ -1.17
YBX3-215ENST00000544504 SAA2-SAA4A0A096LPE2 208 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 DUXBA0A1W2PPF3 345 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 ODF3BA8MYP8 253 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 BUB1B-PAK6H3BSN5 160 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 SLC31A2O15432 143 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 RBFOX2O43251 390 aaKnown RBP eCLIP7.73□□□□□ -1.17
YBX3-215ENST00000544504 SSNA1O43805 119 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 IGHV3-7P01780 117 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 APOA2P02652 100 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 SERPINE2P07093 398 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 SAA2P0DJI9 122 aaPredicted RBP7.73□□□□□ -1.17
YBX3-215ENST00000544504 IGHV4-31P0DP07 118 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 VSIG10L2P0DP72 767 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 HNF1AP20823 631 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 MC5RP33032 325 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 RTL8BQ17RB0 113 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 GPR157Q5UAW9 335 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 DHRS7BQ6IAN0 325 aaPredicted RBP7.73□□□□□ -1.17
YBX3-215ENST00000544504 LIN54Q6MZP7 749 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 ZNF833PQ6ZTB9 187 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 TGIF2LXQ8IUE1 241 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 LGI3Q8N145 548 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 OR8H3Q8N146 312 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 C12orf45Q8N5I9 185 aaPredicted RBP7.73□□□□□ -1.17
YBX3-215ENST00000544504 MITD1Q8WV92 249 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 TCTEX1D2Q8WW35 142 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 IL22RA2Q969J5 263 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 TMEM230Q96A57 120 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 RPEQ96AT9 228 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 TBX15Q96SF7 602 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 TMEM222Q9H0R3 208 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 MED28Q9H204 178 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 BEX1Q9HBH7 125 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 TRRAPQ9Y4A5 3859 aa7.73□□□□□ -1.17
YBX3-215ENST00000544504 A0A0A6YYJ9 748 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 A0A1W2PPE3 182 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 RNASEK-C17orf49H0YIS7 233 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 TCF21O43680 179 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 IGLV2-14P01704 120 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 TRAPPC2P0DI81 140 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 TRAPPC2BP0DI82 140 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 ZNF16P17020 682 aaPredicted RBP7.72□□□□□ -1.17
YBX3-215ENST00000544504 UCP1P25874 307 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 DUTP33316 252 aaKnown RBP7.72□□□□□ -1.17
YBX3-215ENST00000544504 RAB13P51153 203 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 ZNF816Q0VGE8 651 aaPredicted RBP7.72□□□□□ -1.17
YBX3-215ENST00000544504 PDLIM3Q53GG5 364 aaPredicted RBP7.72□□□□□ -1.17
YBX3-215ENST00000544504 FAM120AOSQ5T036 256 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 FAM53AQ6NSI3 398 aaPredicted RBP7.72□□□□□ -1.17
YBX3-215ENST00000544504 LIAT1Q6ZQX7 453 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 ODF3L1Q8IXM7 274 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 LRTM2Q8N967 370 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 OR4P4Q8NGL7 312 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 OR51H1Q8NH63 302 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 OR4S2Q8NH73 311 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 CASTOR1Q8WTX7 329 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 CAPSLQ8WWF8 208 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 LHX4Q969G2 390 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 ST6GALNAC6Q969X2 333 aa7.72□□□□□ -1.17
YBX3-215ENST00000544504 A0A0B4J293 547 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 IGHV1-69DA0A0B4J2H0 117 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 NPFFO15130 113 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 TNFSF12O43508 249 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 IFNA21P01568 189 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 IGHV1-69P01742 117 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 OR5AC1P0C628 307 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 BCAP31P51572 246 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 RRAS2P62070 204 aaPredicted RBP7.71□□□□□ -1.18
YBX3-215ENST00000544504 SUPT4H1P63272 117 aaKnown RBP7.71□□□□□ -1.18
YBX3-215ENST00000544504 EIF4EBP1Q13541 118 aaPredicted RBP7.71□□□□□ -1.18
YBX3-215ENST00000544504 TMEM187Q14656 261 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms