RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 LHBP01229 141 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 OR8U8P0C7N1 319 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 LINC00205P59089 165 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 RAB2AP61019 212 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 HAGHQ16775 308 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 CR1LQ2VPA4 569 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 FAM180AQ6UWF9 173 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 ITLN1Q8WWA0 313 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 RBMXL1Q96E39 390 aaKnown RBP11.57□□□□□ -0.56
MSH2-206ENST00000543555 C20orf24Q9BUV8 137 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 PRELID3BQ9Y3B1 194 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 FAM27E3Q08E93 113 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 SOHLH1Q5JUK2 328 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 CLCC1Q96S66 551 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 PARD6GQ9BYG4 376 aaPredicted RBP11.57□□□□□ -0.56
MSH2-206ENST00000543555 WDR61Q9GZS3 305 aaKnown RBP11.57□□□□□ -0.56
MSH2-206ENST00000543555 HEATR1Q9H583 2144 aaKnown RBP11.57□□□□□ -0.56
MSH2-206ENST00000543555 SH3BGRL2Q9UJC5 107 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 JPT1Q9UK76 154 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 SSUH2Q9Y2M2 353 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 CFAP46Q8IYW2 2715 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 RPS23P62266 143 aaKnown RBP11.57□□□□□ -0.56
MSH2-206ENST00000543555 SLC38A11Q08AI6 406 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 C15orf54Q8N8G6 183 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 ZNRF1Q8ND25 227 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 OR4C12Q96R67 309 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 MRPL37Q9BZE1 423 aaKnown RBP11.57□□□□□ -0.56
MSH2-206ENST00000543555 RPRMQ9NS64 109 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 GNG12Q9UBI6 72 aa11.57□□□□□ -0.56
MSH2-206ENST00000543555 TRAV1-1A0A0B4J248 108 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 CRYBA1P05813 215 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 BMP5P22003 454 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 MORN2Q502X0 79 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 ZNF506Q5JVG8 444 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 AVPI1Q5T686 147 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 C22orf34Q6ZV56 151 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 H2BFWTQ7Z2G1 175 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 C14orf79Q96F83 325 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 CLN8Q9UBY8 286 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 TSPAN9O75954 239 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 SCAF4O95104 1147 aaKnown RBP11.56□□□□□ -0.56
MSH2-206ENST00000543555 SRP19P09132 144 aaKnown RBP11.56□□□□□ -0.56
MSH2-206ENST00000543555 GATA4P43694 442 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 GPR12P47775 334 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 ICAM4Q14773 271 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 RHEBQ15382 184 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 CLDND2Q8NHS1 167 aa11.56□□□□□ -0.56
MSH2-206ENST00000543555 UNKLQ9H9P5 680 aaKnown RBP11.56□□□□□ -0.56
MSH2-206ENST00000543555 YPEL1O60688 119 aa11.55□□□□□ -0.56
MSH2-206ENST00000543555 SERF2P84101 59 aa11.55□□□□□ -0.56
MSH2-206ENST00000543555 OR8G2PQ6IF36 304 aa11.55□□□□□ -0.56
MSH2-206ENST00000543555 FAM216AQ8WUB2 273 aa11.55□□□□□ -0.56
MSH2-206ENST00000543555 YPEL2Q96QA6 119 aa11.55□□□□□ -0.56
MSH2-206ENST00000543555 VSIRQ9H7M9 311 aa11.55□□□□□ -0.56
MSH2-206ENST00000543555 UBE2L5PA0A1B0GUS4 154 aa11.55□□□□□ -0.56
MSH2-206ENST00000543555 PROP1O75360 226 aa11.55□□□□□ -0.56
MSH2-206ENST00000543555 HSPB1P04792 205 aaKnown RBP11.55□□□□□ -0.56
MSH2-206ENST00000543555 DUTP33316 252 aaKnown RBP11.55□□□□□ -0.56
MSH2-206ENST00000543555 EDDM3BP56851 147 aa11.55□□□□□ -0.56
MSH2-206ENST00000543555 NCR3LG1Q68D85 454 aa11.55□□□□□ -0.56
MSH2-206ENST00000543555 DTD1Q8TEA8 209 aa11.55□□□□□ -0.56
MSH2-206ENST00000543555 PLPPR2Q96GM1 343 aa11.55□□□□□ -0.56
MSH2-206ENST00000543555 TUBA4BQ9H853 241 aa11.55□□□□□ -0.56
MSH2-206ENST00000543555 F2RL2O00254 374 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 CD40P25942 277 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 LOXL3P58215 753 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 SELENOVP59797 346 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 TAF15Q92804 592 aaKnown RBP eCLIP11.54□□□□□ -0.56
MSH2-206ENST00000543555 EGLN1Q9GZT9 426 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 MARCH11A6NNE9 402 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 ZG16O60844 167 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 DAOP14920 347 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 CCKARP32238 428 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 FAM201AQ5SY85 155 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 FAM222BQ8WU58 562 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 ZDHHC16Q969W1 377 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 PUS1Q9Y606 427 aaKnown RBP eCLIP11.54□□□□□ -0.56
MSH2-206ENST00000543555 ZNF726P1Q15940 193 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 KHDC3LQ587J8 217 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 MBD3L1Q8WWY6 194 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 HIST1H2BAQ96A08 127 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 R3HDM4Q96D70 268 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 OR6C3Q9NZP0 311 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 RNF7Q9UBF6 113 aa11.54□□□□□ -0.56
MSH2-206ENST00000543555 PMS2P5A8MQ11 134 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 RBMXL2O75526 392 aaKnown RBP11.53□□□□□ -0.56
MSH2-206ENST00000543555 IGHV1-46P01743 117 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 FOLR2P14207 255 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 RAB13P51153 203 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 TNFAIP6P98066 277 aaPredicted RBP11.53□□□□□ -0.56
MSH2-206ENST00000543555 DOLPP1Q86YN1 238 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 PINX1Q96BK5 328 aaKnown RBP11.53□□□□□ -0.56
MSH2-206ENST00000543555 RCC1LQ96I51 464 aaKnown RBP11.53□□□□□ -0.56
MSH2-206ENST00000543555 CIB3Q96Q77 187 aaPredicted RBP11.53□□□□□ -0.56
MSH2-206ENST00000543555 SAV1Q9H4B6 383 aaPredicted RBP11.53□□□□□ -0.56
MSH2-206ENST00000543555 GCM1Q9NP62 436 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 CALYQ9NYX4 217 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 IL19Q9UHD0 177 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 LOC102723971A0A1B0GUV8 181 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 CD55P08174 381 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms