RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 RPS16P62249 146 aaKnown RBP15.77■□□□□ 0.12
CACNA2D4-215ENST00000542340 RPL23AP62750 156 aaKnown RBP15.77■□□□□ 0.12
CACNA2D4-215ENST00000542340 CFHR3Q02985 330 aa15.77■□□□□ 0.12
CACNA2D4-215ENST00000542340 PSG5Q15238 335 aa15.77■□□□□ 0.12
CACNA2D4-215ENST00000542340 TMEM69Q5SWH9 247 aa15.77■□□□□ 0.12
CACNA2D4-215ENST00000542340 GPR107Q5VW38 600 aa15.77■□□□□ 0.12
CACNA2D4-215ENST00000542340 ZNF660Q6AZW8 331 aaPredicted RBP15.77■□□□□ 0.12
CACNA2D4-215ENST00000542340 GPR141Q7Z602 305 aa15.77■□□□□ 0.12
CACNA2D4-215ENST00000542340 GVQW1Q8N7I0 195 aa15.77■□□□□ 0.12
CACNA2D4-215ENST00000542340 ADTRPQ96IZ2 230 aa15.77■□□□□ 0.12
CACNA2D4-215ENST00000542340 TUSC2O75896 110 aa15.76■□□□□ 0.11
CACNA2D4-215ENST00000542340 IGHG4P01861 327 aa15.76■□□□□ 0.11
CACNA2D4-215ENST00000542340 ELANEP08246 267 aa15.76■□□□□ 0.11
CACNA2D4-215ENST00000542340 PTHLHP12272 177 aa15.76■□□□□ 0.11
CACNA2D4-215ENST00000542340 SLC6A1P30531 599 aa15.76■□□□□ 0.11
CACNA2D4-215ENST00000542340 ARPC4P59998 168 aa15.76■□□□□ 0.11
CACNA2D4-215ENST00000542340 FOXE3Q13461 319 aa15.76■□□□□ 0.11
CACNA2D4-215ENST00000542340 PLGLAQ15195 96 aa15.76■□□□□ 0.11
CACNA2D4-215ENST00000542340 ZNF645Q8N7E2 425 aa15.76■□□□□ 0.11
CACNA2D4-215ENST00000542340 RNF152Q8N8N0 203 aa15.76■□□□□ 0.11
CACNA2D4-215ENST00000542340 COMMD3Q9UBI1 195 aa15.76■□□□□ 0.11
CACNA2D4-215ENST00000542340 METTL1Q9UBP6 276 aaKnown RBP15.76■□□□□ 0.11
CACNA2D4-215ENST00000542340 ATP6V0E1O15342 81 aa15.75■□□□□ 0.11
CACNA2D4-215ENST00000542340 APOA1P02647 267 aa15.75■□□□□ 0.11
CACNA2D4-215ENST00000542340 RRASP10301 218 aa15.75■□□□□ 0.11
CACNA2D4-215ENST00000542340 DUTP33316 252 aaKnown RBP15.75■□□□□ 0.11
CACNA2D4-215ENST00000542340 LGALS7P47929 136 aa15.75■□□□□ 0.11
CACNA2D4-215ENST00000542340 TAS2R20P59543 309 aa15.75■□□□□ 0.11
CACNA2D4-215ENST00000542340 CBX3Q13185 183 aa15.75■□□□□ 0.11
CACNA2D4-215ENST00000542340 PARP11Q9NR21 331 aa15.75■□□□□ 0.11
CACNA2D4-215ENST00000542340 J3QRK9 145 aa15.74■□□□□ 0.11
CACNA2D4-215ENST00000542340 FCN1O00602 326 aa15.74■□□□□ 0.11
CACNA2D4-215ENST00000542340 PPIFP30405 207 aaKnown RBP15.74■□□□□ 0.11
CACNA2D4-215ENST00000542340 CX3CL1P78423 397 aa15.74■□□□□ 0.11
CACNA2D4-215ENST00000542340 RTL8BQ17RB0 113 aa15.74■□□□□ 0.11
CACNA2D4-215ENST00000542340 CXorf66Q5JRM2 361 aaPredicted RBP15.74■□□□□ 0.11
CACNA2D4-215ENST00000542340 BVESQ8NE79 360 aa15.74■□□□□ 0.11
CACNA2D4-215ENST00000542340 WFDC9Q8NEX5 89 aa15.74■□□□□ 0.11
CACNA2D4-215ENST00000542340 DDB2Q92466 427 aa15.74■□□□□ 0.11
CACNA2D4-215ENST00000542340 NECAP2Q9NVZ3 263 aa15.74■□□□□ 0.11
CACNA2D4-215ENST00000542340 TRAV41A0A0B4J266 112 aa15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 IGKV1D-13A0A0B4J2D9 117 aa15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 SMIM31A0A1B0GVY4 71 aa15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 PF4P02776 101 aa15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 RPLP1P05386 114 aaKnown RBP15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 EIF4EP06730 217 aaKnown RBP15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 IGKV1-13P0DP09 117 aa15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 FCGR2CP31995 323 aa15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 CRIP2P52943 208 aaPredicted RBP15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 TMEM177Q53S58 311 aa15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 MZT2AQ6P582 158 aa15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 ZNF562Q6V9R5 426 aa15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 OR5AP2Q8NGF4 316 aa15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 AP3S1Q92572 193 aa15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 SNAPC3Q92966 411 aa15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 IFT46Q9NQC8 304 aa15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 WSB1Q9Y6I7 421 aa15.73■□□□□ 0.11
CACNA2D4-215ENST00000542340 NOTCH3Q9UM47 2321 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 MEIS3P1A6NDR6 274 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 LINC00473A8K010 186 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 G3V318 75 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 IGLV2-14P01704 120 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 IGLV2-23P01705 113 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 ZNF182P17025 639 aaPredicted RBP15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 PSMB8P28062 276 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 PRSS3P35030 304 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 CDX1P47902 265 aaPredicted RBP15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 NDPQ00604 133 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 DEFA6Q01524 100 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 ZNF695Q8IW36 515 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 MINDY2Q8NBR6 621 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 HARBI1Q96MB7 349 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 CLCC1Q96S66 551 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 ANAPC10Q9UM13 185 aa15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 RBMX2Q9Y388 322 aaKnown RBP15.72■□□□□ 0.11
CACNA2D4-215ENST00000542340 PLXNB1O43157 2135 aa15.71■□□□□ 0.11
CACNA2D4-215ENST00000542340 NUDT19A8MXV4 375 aa15.71■□□□□ 0.11
CACNA2D4-215ENST00000542340 SLC25A17O43808 307 aa15.71■□□□□ 0.11
CACNA2D4-215ENST00000542340 IGLV1-40P01703 118 aa15.71■□□□□ 0.11
CACNA2D4-215ENST00000542340 FCER2P06734 321 aa15.71■□□□□ 0.11
CACNA2D4-215ENST00000542340 CDK10Q15131 360 aa15.71■□□□□ 0.11
CACNA2D4-215ENST00000542340 SAMD5Q5TGI4 173 aa15.71■□□□□ 0.11
CACNA2D4-215ENST00000542340 C18orf65Q6ZTR6 163 aa15.71■□□□□ 0.11
CACNA2D4-215ENST00000542340 PPP1R27Q86WC6 154 aa15.71■□□□□ 0.11
CACNA2D4-215ENST00000542340 KLHL30-AS1Q8NEE0 82 aa15.71■□□□□ 0.11
CACNA2D4-215ENST00000542340 FBXO7Q9Y3I1 522 aa15.71■□□□□ 0.11
CACNA2D4-215ENST00000542340 NUBP2Q9Y5Y2 271 aa15.71■□□□□ 0.11
CACNA2D4-215ENST00000542340 G3V4G9 280 aa15.7■□□□□ 0.1
CACNA2D4-215ENST00000542340 SHOXO15266 292 aa15.7■□□□□ 0.1
CACNA2D4-215ENST00000542340 HPGDSO60760 199 aa15.7■□□□□ 0.1
CACNA2D4-215ENST00000542340 CA2P00918 260 aa15.7■□□□□ 0.1
CACNA2D4-215ENST00000542340 CRYGBP07316 175 aa15.7■□□□□ 0.1
CACNA2D4-215ENST00000542340 EGR2P11161 476 aaPredicted RBP15.7■□□□□ 0.1
CACNA2D4-215ENST00000542340 NAT1P18440 290 aa15.7■□□□□ 0.1
CACNA2D4-215ENST00000542340 ELK1P19419 428 aa15.7■□□□□ 0.1
CACNA2D4-215ENST00000542340 CD33P20138 364 aa15.7■□□□□ 0.1
CACNA2D4-215ENST00000542340 AADACP22760 399 aa15.7■□□□□ 0.1
CACNA2D4-215ENST00000542340 TMEM267Q0VDI3 215 aaPredicted RBP15.7■□□□□ 0.1
CACNA2D4-215ENST00000542340 MSMO1Q15800 293 aa15.7■□□□□ 0.1
CACNA2D4-215ENST00000542340 C19orf54Q5BKX5 351 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms