RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 TOLLIPQ9H0E2 274 aa15.73■□□□□ 0.11
DDB1-220ENST00000542337 KCNK7Q9Y2U2 307 aa15.73■□□□□ 0.11
DDB1-220ENST00000542337 OR8U9P0C7N5 309 aa15.72■□□□□ 0.11
DDB1-220ENST00000542337 GSTT2P0CG29 244 aa15.72■□□□□ 0.11
DDB1-220ENST00000542337 GSTT2BP0CG30 244 aa15.72■□□□□ 0.11
DDB1-220ENST00000542337 HIST1H1DP16402 221 aaKnown RBP15.72■□□□□ 0.11
DDB1-220ENST00000542337 GNB1P62873 340 aa15.72■□□□□ 0.11
DDB1-220ENST00000542337 TAGLNQ01995 201 aaKnown RBP15.72■□□□□ 0.11
DDB1-220ENST00000542337 MOGAT2Q3SYC2 334 aa15.72■□□□□ 0.11
DDB1-220ENST00000542337 SLC35D1Q9NTN3 355 aa15.72■□□□□ 0.11
DDB1-220ENST00000542337 GAB2Q9UQC2 676 aa15.72■□□□□ 0.11
DDB1-220ENST00000542337 FBXO7Q9Y3I1 522 aa15.72■□□□□ 0.11
DDB1-220ENST00000542337 PROP1O75360 226 aa15.71■□□□□ 0.11
DDB1-220ENST00000542337 CNIH1O95406 144 aa15.71■□□□□ 0.11
DDB1-220ENST00000542337 CA2P00918 260 aa15.71■□□□□ 0.11
DDB1-220ENST00000542337 IGKV1-16P04430 117 aa15.71■□□□□ 0.11
DDB1-220ENST00000542337 LGALS7P47929 136 aa15.71■□□□□ 0.11
DDB1-220ENST00000542337 IGSF11Q5DX21 431 aa15.71■□□□□ 0.11
DDB1-220ENST00000542337 LFNGQ8NES3 379 aa15.71■□□□□ 0.11
DDB1-220ENST00000542337 FCGR1BQ92637 280 aa15.71■□□□□ 0.11
DDB1-220ENST00000542337 CABLES2Q9BTV7 478 aa15.71■□□□□ 0.11
DDB1-220ENST00000542337 ATG5Q9H1Y0 275 aa15.71■□□□□ 0.11
DDB1-220ENST00000542337 OR2D2Q9H210 308 aa15.71■□□□□ 0.11
DDB1-220ENST00000542337 SCOCQ9UIL1 159 aa15.71■□□□□ 0.11
DDB1-220ENST00000542337 TRBV6-7A0A0A0MS04 114 aa15.7■□□□□ 0.1
DDB1-220ENST00000542337 SHISA3A0PJX4 238 aa15.7■□□□□ 0.1
DDB1-220ENST00000542337 LINC01619G3V211 115 aa15.7■□□□□ 0.1
DDB1-220ENST00000542337 RAB27BO00194 218 aa15.7■□□□□ 0.1
DDB1-220ENST00000542337 MFNGO00587 321 aa15.7■□□□□ 0.1
DDB1-220ENST00000542337 OVOL1O14753 267 aa15.7■□□□□ 0.1
DDB1-220ENST00000542337 ATP6V1G2O95670 118 aa15.7■□□□□ 0.1
DDB1-220ENST00000542337 EGR2P11161 476 aaPredicted RBP15.7■□□□□ 0.1
DDB1-220ENST00000542337 PSMB9P28065 219 aa15.7■□□□□ 0.1
DDB1-220ENST00000542337 FXYD3Q14802 87 aa15.7■□□□□ 0.1
DDB1-220ENST00000542337 SRSF7Q16629 238 aaKnown RBP eCLIP15.7■□□□□ 0.1
DDB1-220ENST00000542337 C19orf54Q5BKX5 351 aa15.7■□□□□ 0.1
DDB1-220ENST00000542337 UBE2UQ5VVX9 321 aa15.7■□□□□ 0.1
DDB1-220ENST00000542337 ZNF429Q86V71 674 aa15.7■□□□□ 0.1
DDB1-220ENST00000542337 ARPC1AQ92747 370 aa15.7■□□□□ 0.1
DDB1-220ENST00000542337 FAM103A1Q9BTL3 118 aaKnown RBP15.7■□□□□ 0.1
DDB1-220ENST00000542337 YTHDF1Q9BYJ9 559 aaKnown RBP15.7■□□□□ 0.1
DDB1-220ENST00000542337 SLA2Q9H6Q3 261 aa15.7■□□□□ 0.1
DDB1-220ENST00000542337 SLC25A17O43808 307 aa15.69■□□□□ 0.1
DDB1-220ENST00000542337 SOX15O60248 233 aa15.69■□□□□ 0.1
DDB1-220ENST00000542337 LY86O95711 162 aa15.69■□□□□ 0.1
DDB1-220ENST00000542337 LGALS1P09382 135 aaKnown RBP15.69■□□□□ 0.1
DDB1-220ENST00000542337 RRASP10301 218 aa15.69■□□□□ 0.1
DDB1-220ENST00000542337 LINC00205P59089 165 aa15.69■□□□□ 0.1
DDB1-220ENST00000542337 RTL8BQ17RB0 113 aa15.69■□□□□ 0.1
DDB1-220ENST00000542337 SPARTQ8N0X7 666 aa15.69■□□□□ 0.1
DDB1-220ENST00000542337 CASTOR1Q8WTX7 329 aa15.69■□□□□ 0.1
DDB1-220ENST00000542337 DCUN1D4Q92564 292 aa15.69■□□□□ 0.1
DDB1-220ENST00000542337 MS4A10Q96PG2 267 aa15.69■□□□□ 0.1
DDB1-220ENST00000542337 PRR25Q96S07 402 aa15.69■□□□□ 0.1
DDB1-220ENST00000542337 ZNF355PQ9NSJ1 428 aa15.69■□□□□ 0.1
DDB1-220ENST00000542337 SDHAF2Q9NX18 166 aa15.69■□□□□ 0.1
DDB1-220ENST00000542337 ZNF230Q9UIE0 474 aaPredicted RBP15.69■□□□□ 0.1
DDB1-220ENST00000542337 ZNF256Q9Y2P7 627 aaPredicted RBP15.69■□□□□ 0.1
DDB1-220ENST00000542337 A0A0B4J203 849 aa15.68■□□□□ 0.1
DDB1-220ENST00000542337 NOTOA8MTQ0 251 aa15.68■□□□□ 0.1
DDB1-220ENST00000542337 ARPC1BO15143 372 aaKnown RBP15.68■□□□□ 0.1
DDB1-220ENST00000542337 NHLRC4P0CG21 123 aaPredicted RBP15.68■□□□□ 0.1
DDB1-220ENST00000542337 FGF9P31371 208 aaPredicted RBP15.68■□□□□ 0.1
DDB1-220ENST00000542337 TPPP2P59282 170 aa15.68■□□□□ 0.1
DDB1-220ENST00000542337 TPRA1Q86W33 373 aa15.68■□□□□ 0.1
DDB1-220ENST00000542337 GRPEL2Q8TAA5 225 aa15.68■□□□□ 0.1
DDB1-220ENST00000542337 MAFIPQ8WZ33 124 aa15.68■□□□□ 0.1
DDB1-220ENST00000542337 ADTRPQ96IZ2 230 aa15.68■□□□□ 0.1
DDB1-220ENST00000542337 ALX4Q9H161 411 aaPredicted RBP15.68■□□□□ 0.1
DDB1-220ENST00000542337 STUB1Q9UNE7 303 aa15.68■□□□□ 0.1
DDB1-220ENST00000542337 SSR3Q9UNL2 185 aa15.68■□□□□ 0.1
DDB1-220ENST00000542337 SHOXO15266 292 aa15.67■□□□□ 0.1
DDB1-220ENST00000542337 SCGNO76038 276 aa15.67■□□□□ 0.1
DDB1-220ENST00000542337 TRGV3P03979 118 aa15.67■□□□□ 0.1
DDB1-220ENST00000542337 HSPB1P04792 205 aaKnown RBP15.67■□□□□ 0.1
DDB1-220ENST00000542337 DTYMKP23919 212 aa15.67■□□□□ 0.1
DDB1-220ENST00000542337 CDNFQ49AH0 187 aa15.67■□□□□ 0.1
DDB1-220ENST00000542337 ASPHD1Q5U4P2 390 aa15.67■□□□□ 0.1
DDB1-220ENST00000542337 C11orf87Q6NUJ2 197 aa15.67■□□□□ 0.1
DDB1-220ENST00000542337 Q6ZS49 121 aa15.67■□□□□ 0.1
DDB1-220ENST00000542337 HARBI1Q96MB7 349 aa15.67■□□□□ 0.1
DDB1-220ENST00000542337 TMEM68Q96MH6 324 aa15.67■□□□□ 0.1
DDB1-220ENST00000542337 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.67■□□□□ 0.1
DDB1-220ENST00000542337 SAP30O75446 220 aa15.66■□□□□ 0.1
DDB1-220ENST00000542337 IGHV3-11P01762 117 aa15.66■□□□□ 0.1
DDB1-220ENST00000542337 CTXN2P0C2S0 81 aa15.66■□□□□ 0.1
DDB1-220ENST00000542337 BVESQ8NE79 360 aa15.66■□□□□ 0.1
DDB1-220ENST00000542337 DLX4Q92988 240 aaPredicted RBP15.66■□□□□ 0.1
DDB1-220ENST00000542337 ST6GALNAC5Q9BVH7 336 aa15.66■□□□□ 0.1
DDB1-220ENST00000542337 TXNL4BQ9NX01 149 aaKnown RBP15.66■□□□□ 0.1
DDB1-220ENST00000542337 LSM4Q9Y4Z0 139 aaKnown RBP15.66■□□□□ 0.1
DDB1-220ENST00000542337 A0A0G2JLM5 398 aa15.65■□□□□ 0.1
DDB1-220ENST00000542337 C13orf42A0A1B0GVH6 325 aa15.65■□□□□ 0.1
DDB1-220ENST00000542337 SMIM30A4D0T7 59 aa15.65■□□□□ 0.1
DDB1-220ENST00000542337 H3BUA1 57 aa15.65■□□□□ 0.1
DDB1-220ENST00000542337 SLURP1P55000 103 aa15.65■□□□□ 0.1
DDB1-220ENST00000542337 PITPNAQ00169 270 aa15.65■□□□□ 0.1
DDB1-220ENST00000542337 RHOVQ96L33 236 aa15.65■□□□□ 0.1
DDB1-220ENST00000542337 TPSG1Q9NRR2 321 aa15.65■□□□□ 0.1
DDB1-220ENST00000542337 DAPK2Q9UIK4 370 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms