RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 OR4A8P0C604 315 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 HOXA6P31267 233 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 KRTAP27-1Q3LI81 207 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 DPPA3Q6W0C5 159 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 OR51I2Q9H344 312 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 CEP295Q9C0D2 2601 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 NKX2-8O15522 239 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 ZG16O60844 167 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 OR2H2O95918 312 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 IGLV2-14P01704 120 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 GYPAP02724 150 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 GNG3P63215 75 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 OR1L1Q8NH94 360 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 MBD3L1Q8WWY6 194 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 OR2D2Q9H210 308 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 TRBV24-1A0A075B6N3 115 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 TRAV1-1A0A0B4J248 108 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 TDGF1P13385 188 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 HOXC12P31275 282 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 WNT5AP41221 380 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 RNFT1Q5M7Z0 435 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 OR52L2PQ8NGH6 319 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 OR5A2Q8NGI9 324 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 SRD5A3Q9H8P0 318 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 SPTAN1Q13813 2472 aaKnown RBP12.91□□□□□ -0.34
CNOT9-208ENST00000542068 ARR3P36575 388 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 OR3A1P47881 315 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 TGFBR3Q03167 851 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 ZNF766Q5HY98 468 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 VHLLQ6RSH7 139 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 ZNF573Q86YE8 665 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 ZNF709Q8N972 641 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 TRAV38-1A0A0B4J264 116 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 PFN1P07737 140 aaKnown RBP12.91□□□□□ -0.34
CNOT9-208ENST00000542068 EDDM3BP56851 147 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 SOX8P57073 446 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 COLCA1Q6ZS62 124 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 RAB24Q969Q5 203 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 DERL1Q9BUN8 251 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 CBLN4Q9NTU7 201 aa12.91□□□□□ -0.34
CNOT9-208ENST00000542068 KLF13Q9Y2Y9 288 aaPredicted RBP12.91□□□□□ -0.34
CNOT9-208ENST00000542068 ABCA1O95477 2261 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 ZNF320A2RRD8 509 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 KBTBD11O94819 623 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 RPL30P62888 115 aaKnown RBP12.9□□□□□ -0.34
CNOT9-208ENST00000542068 EDDM3AQ14507 147 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 IL22RA2Q969J5 263 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 POM121L2Q96KW2 1035 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FAM90A10PA6NDY2 464 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FAM90A18PA6NE21 464 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FAM90A16PA6NEW6 464 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FAM90A20PA6NIJ5 464 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FAM90A8PA6NJQ4 464 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FAM90A7PA6NKC0 464 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FAM90A22PA8MWA6 464 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FAM90A12PA8MX19 464 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FAM90A5PA8MXJ8 464 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FAM90A23PA8MXZ1 464 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 EREGO14944 169 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 S1PR2O95136 353 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FAM90A15PP0C7V4 464 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FAM90A13PP0C7W8 464 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FAM90A14PP0C7W9 464 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FAM90A24PP0C7X0 464 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 SP9P0CG40 484 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 JOSD1Q15040 202 aaPredicted RBP12.9□□□□□ -0.34
CNOT9-208ENST00000542068 OR2T10Q8NGZ9 312 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 FER1L6-AS2Q96M78 137 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 ZPBPQ9BS86 351 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 PATZ1Q9HBE1 687 aaKnown RBP12.9□□□□□ -0.34
CNOT9-208ENST00000542068 MSL2Q9HCI7 577 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 LIN7CQ9NUP9 197 aaKnown RBP12.9□□□□□ -0.34
CNOT9-208ENST00000542068 DUSP13Q9UII6 198 aa12.9□□□□□ -0.34
CNOT9-208ENST00000542068 ZNF705FA8MVS1 300 aaPredicted RBP12.89□□□□□ -0.35
CNOT9-208ENST00000542068 ZNF705DP0CH99 300 aaPredicted RBP12.89□□□□□ -0.35
CNOT9-208ENST00000542068 ZNF705BP0CI00 300 aaPredicted RBP12.89□□□□□ -0.35
CNOT9-208ENST00000542068 NUBP1P53384 320 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 CASP6P55212 293 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 SERF2P84101 59 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 TCF23Q7RTU1 214 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 KIAA1549Q9HCM3 1950 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 SPAARA0A1B0GVQ0 90 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 WNT9BO14905 357 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 GABRA2P47869 451 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 TNFRSF9Q07011 255 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 TBC1D28Q2M2D7 210 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 CYP2G1PQ6ZSU1 146 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 M0R296 226 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 AESQ08117 197 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 Q6ZS49 121 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 PINX1Q96BK5 328 aaKnown RBP12.89□□□□□ -0.35
CNOT9-208ENST00000542068 DDA1Q9BW61 102 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 CTDSP1Q9GZU7 261 aa12.89□□□□□ -0.35
CNOT9-208ENST00000542068 RIMS4Q9H426 269 aaPredicted RBP12.89□□□□□ -0.35
CNOT9-208ENST00000542068 IL18BPO95998 194 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 CD59P13987 128 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 Q3ZCU0 254 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 OR10P1Q8NGE3 313 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 SLC25A40Q8TBP6 338 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 PSMG3Q9BT73 122 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms