RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 RHOAP61586 193 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 PRDX1Q06830 199 aaKnown RBP1.06□□□□□ -2.24
PRKDC-210ENST00000541488 CST6Q15828 149 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 LRRC26Q2I0M4 334 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 Q3ZCU0 254 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 N4BP2L1Q5TBK1 243 aaPredicted RBP1.06□□□□□ -2.24
PRKDC-210ENST00000541488 AADACL4Q5VUY2 407 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 CYHR1Q6ZMK1 362 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 DGAT2L6Q6ZPD8 337 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 OLIG3Q7RTU3 272 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 LYPD6Q86Y78 171 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 ZIC4Q8N9L1 334 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 CDRT4Q8N9R6 151 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 FAM45AQ8TCE6 357 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 GTF2H4Q92759 462 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 CPB2Q96IY4 423 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 LINC01587Q99440 93 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 B9D2Q9BPU9 175 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 BCL2L14Q9BZR8 327 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 MFSD1Q9H3U5 465 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 C11orf49Q9H6J7 331 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 MAT2BQ9NZL9 334 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 OR5V1Q9UGF6 321 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 NXT1Q9UKK6 140 aaKnown RBP1.06□□□□□ -2.24
PRKDC-210ENST00000541488 POMPQ9Y244 141 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 U3KQK5 164 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 FLNAP21333 2647 aaKnown RBP1.06□□□□□ -2.24
PRKDC-210ENST00000541488 SYNRGQ9UMZ2 1314 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 DOCK3Q8IZD9 2030 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 CDK5RAP2Q96SN8 1893 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 GREB1Q4ZG55 1949 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 SCN9AQ15858 1988 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 SCN10AQ9Y5Y9 1956 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 FN1P02751 2386 aaKnown RBP1.05□□□□□ -2.24
PRKDC-210ENST00000541488 VWFP04275 2813 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 G3V3Q6 166 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 DENRO43583 198 aaKnown RBP1.05□□□□□ -2.24
PRKDC-210ENST00000541488 SH2D1AO60880 128 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 SHOX2O60902 331 aaPredicted RBP1.05□□□□□ -2.24
PRKDC-210ENST00000541488 LDOC1O95751 146 aaPredicted RBP1.05□□□□□ -2.24
PRKDC-210ENST00000541488 FADS2O95864 444 aaKnown RBP1.05□□□□□ -2.24
PRKDC-210ENST00000541488 IGKV5-2P06315 115 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 CTLA4P16410 223 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 MAGEA3P43357 314 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 HSPA13P48723 471 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 PAFAH1B3Q15102 231 aaKnown RBP1.05□□□□□ -2.24
PRKDC-210ENST00000541488 SPIN4Q56A73 249 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 C10orf91Q5T1B1 145 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 LAIR2Q6ISS4 152 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 CLEC20AQ6ZU45 233 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 MARCH3Q86UD3 253 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 LRRC6Q86X45 466 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 HS3ST5Q8IZT8 346 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 OR2AE1Q8NHA4 323 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 MAL2Q969L2 176 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 REEP6Q96HR9 211 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 CATSPER2Q96P56 530 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 OR8B2Q96RD0 313 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 HBEGFQ99075 208 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 EBPLQ9BY08 206 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 PRRG3Q9BZD7 231 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 RPUSD1Q9UJJ7 312 aaKnown RBP1.05□□□□□ -2.24
PRKDC-210ENST00000541488 BIRC6Q9NR09 4857 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 UBR2Q8IWV8 1755 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 SIPA1L1O43166 1804 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 TGP01266 2768 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 SPTA1P02549 2419 aa1.05□□□□□ -2.24
PRKDC-210ENST00000541488 USP9YO00507 2555 aaPredicted RBP1.04□□□□□ -2.24
PRKDC-210ENST00000541488 ITPR2Q14571 2701 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 DOCK2Q92608 1830 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 JMJD1CQ15652 2540 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 A6NED7 52 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 ARGFXA6NJG6 315 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 ARL14EPLP0DKL9 152 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 NQO2P16083 231 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 SPNP16150 400 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 ZNF3P17036 446 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 ATF1P18846 271 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 SPAM1P38567 509 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 FLOT2Q14254 428 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 USF2Q15853 346 aaPredicted RBP1.04□□□□□ -2.24
PRKDC-210ENST00000541488 KRTCAP2Q8N6L1 136 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 SPERTQ8NA61 448 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 GATD1Q8NB37 220 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 SPPL2BQ8TCT7 592 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 KCTD4Q8WVF5 259 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 RORBQ92753 470 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 HIST1H2BAQ96A08 127 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 PPWD1Q96BP3 646 aaKnown RBP1.04□□□□□ -2.24
PRKDC-210ENST00000541488 C20orf166-AS1Q96NR2 134 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 FAAP24Q9BTP7 215 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 ARL6Q9H0F7 186 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 TMEM106BQ9NUM4 274 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 MRPL16Q9NX20 251 aaKnown RBP1.04□□□□□ -2.24
PRKDC-210ENST00000541488 COMMD9Q9P000 198 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 VPREB3Q9UKI3 123 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 MTCH2Q9Y6C9 303 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 CCNB3Q8WWL7 1395 aa1.04□□□□□ -2.24
PRKDC-210ENST00000541488 ANKARQ7Z5J8 1434 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms