RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 FAM90A24PP0C7X0 464 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 SSTR5P35346 364 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 PSMB3P49720 205 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 TAS2R60P59551 318 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 MRGPRDQ8TDS7 321 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 APH1AQ96BI3 265 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 TECTBQ96PL2 329 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 PSMG3Q9BT73 122 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 PILRBQ9UKJ0 227 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 TET2Q6N021 2002 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 WISP2O76076 250 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 NDUFB4O95168 129 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 SCGB1D1O95968 90 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 GCH1P30793 250 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 TMEM242Q9NWH2 141 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 SIT1Q9Y3P8 196 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 C11orf94C9JXX5 98 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 ST8SIA5O15466 376 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 DNPH1O43598 174 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 IL3RAP26951 378 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 SERF2P84101 59 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 TMEM14EPQ6UXP3 125 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 ZNF573Q86YE8 665 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 GCNT2Q8N0V5 402 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 OR2M7Q8NG81 312 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 ZNF703Q9H7S9 590 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 BDP1A6H8Y1 2624 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 TNRC6BQ9UPQ9 1833 aaKnown RBP8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 A6NNC1 897 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 LINC00473A8K010 186 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 RBFOX2O43251 390 aaKnown RBP eCLIP8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 HRASP01112 189 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 IFNA1P01562 189 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 GNB1P62873 340 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 PAX5Q02548 391 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 UTF1Q5T230 341 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 ALKBH2Q6NS38 261 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 ZNF497Q6ZNH5 498 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 OR2T10Q8NGZ9 312 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 LSM10Q969L4 123 aaKnown RBP8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 NPCDR1Q9BY65 106 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 DEFB127Q9H1M4 99 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 MSL2Q9HCI7 577 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 LIN7CQ9NUP9 197 aaKnown RBP8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 PLCE1Q9P212 2302 aa8.69□□□□□ -1.02
CDC42SE1-207ENST00000540998 ABCA1O95477 2261 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 TRBV20OR9-2A0A075B6H5 130 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 ZNF320A2RRD8 509 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 C12orf77C9JDV5 145 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 F2Z2F3 143 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 PLP2Q04941 152 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 Q3ZCU0 254 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 ATP1A1-AS1Q5TC04 95 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 OR5R1Q8NH85 324 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 SNHG12Q9BXW3 62 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 LOXL2Q9Y4K0 774 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 B4E171 279 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 TSPAN7P41732 249 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 SAXO1Q8IYX7 474 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 TDHQ8IZJ6 230 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 DTD1Q8TEA8 209 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 P2RX4Q99571 388 aa8.68□□□□□ -1.02
CDC42SE1-207ENST00000540998 PMS2P5A8MQ11 134 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 DVL1O14640 695 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 TCAPO15273 167 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 SPINK4O60575 86 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 SS18L1O75177 396 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 PRR31Q5SQ13 230 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 TMEM251Q8N6I4 163 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 TMEM170AQ8WVE7 144 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 LURAP1Q96LR2 239 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 TTTY12Q9BZ98 90 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 CTDSP1Q9GZU7 261 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 CTXND1A0A1B0GTU2 59 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 NTN3O00634 580 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 LYZL6O75951 148 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 SYNGR4O95473 234 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 GABRA2P47869 451 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 PLGLB1Q02325 96 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 ZNF124Q15973 351 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 ACTL10Q5JWF8 245 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 PRAMEF6Q5VXH4 476 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 PMS2CLQ68D20 193 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 PYGO2Q9BRQ0 406 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 NDUFAF3Q9BU61 184 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 QTRT1Q9BXR0 403 aaKnown RBP8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 HIPK2Q9H2X6 1198 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 OR6C3Q9NZP0 311 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 LRP5LA4QPB2 252 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 LRRC30A6NM36 301 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 J3QT63 122 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 SLC17A3O00476 420 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 EDDM3AQ14507 147 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 SRSF7Q16629 238 aaKnown RBP eCLIP8.67□□□□□ -1.026e-6■■■□□ 15.5
CDC42SE1-207ENST00000540998 OR10P1Q8NGE3 313 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 SSMEM1Q8WWF3 244 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 PSG11Q9UQ72 335 aa8.67□□□□□ -1.02
CDC42SE1-207ENST00000540998 RRHO14718 337 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 AGFG2O95081 481 aa8.66□□□□□ -1.02
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