RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 NAT8BQ9UHF3 227 aa7.44□□□□□ -1.22
DDB1-217ENST00000540166 PHF3Q92576 2039 aaKnown RBP7.43□□□□□ -1.22
DDB1-217ENST00000540166 HELZ2Q9BYK8 2649 aaKnown RBP7.43□□□□□ -1.22
DDB1-217ENST00000540166 COL5A1P20908 1838 aaPredicted RBP7.43□□□□□ -1.22
DDB1-217ENST00000540166 TRGV5A0A0B4J1U4 118 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 TMEM250H0YL14 139 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 SPRY1O43609 319 aaPredicted RBP7.43□□□□□ -1.22
DDB1-217ENST00000540166 IL3RAP26951 378 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 QRFPP83859 136 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 SP5Q6BEB4 398 aaPredicted RBP7.43□□□□□ -1.22
DDB1-217ENST00000540166 TMEM171Q8WVE6 324 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 PP6455Q8WZ26 134 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 C11orf94C9JXX5 98 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 ZNF253O75346 499 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 PPYP01298 95 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 PAX1P15863 534 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 CALHM1Q8IU99 346 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 SERTAD4Q9NUC0 356 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 HSPB7Q9UBY9 170 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 IFNL4K9M1U5 179 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 CCL25O15444 150 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 CLDN17P56750 224 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 FOXF1Q12946 379 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 PDCD1Q15116 288 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 OR10G9Q8NGN4 311 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 OR10G7Q8NGN6 311 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 ASB10Q8WXI3 467 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 SPTSSAQ969W0 71 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 GSX1Q9H4S2 264 aaPredicted RBP7.43□□□□□ -1.22
DDB1-217ENST00000540166 GPR35Q9HC97 309 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 IL19Q9UHD0 177 aa7.43□□□□□ -1.22
DDB1-217ENST00000540166 IGKV1D-8A0A087WSZ0 117 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 TRAV39A0A0B4J263 110 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 A0A1B0GUS0 222 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 HSBP1O75506 76 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 SERF1AO75920 110 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 COL8A1P27658 744 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 UBE2NP61088 152 aaKnown RBP7.42□□□□□ -1.22
DDB1-217ENST00000540166 PLPPR5Q32ZL2 321 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 FFAR4Q5NUL3 377 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 ERASQ7Z444 233 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 OR5AS1Q8N127 324 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 ZNF808Q8N4W9 903 aaPredicted RBP7.42□□□□□ -1.22
DDB1-217ENST00000540166 OR10G8Q8NGN5 311 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 ADIPOR1Q96A54 375 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 TMEM222Q9H0R3 208 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 GLRX2Q9NS18 164 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 ST3GAL6Q9Y274 331 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 SNURFLB1AK76 121 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 SPINK4O60575 86 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 APOA2P02652 100 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 GZMHP20718 246 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 IER3P46695 156 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 RBX1P62877 108 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 IGLV3-21P80748 117 aaPredicted RBP7.42□□□□□ -1.22
DDB1-217ENST00000540166 C9orf40Q8IXQ3 194 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 ATOH7Q8N100 152 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 BATF2Q8N1L9 274 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 IL1F10Q8WWZ1 152 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 UHRF2Q96PU4 802 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 ZNF430Q9H8G1 570 aaPredicted RBP7.42□□□□□ -1.22
DDB1-217ENST00000540166 WASHC3Q9Y3C0 194 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 TIMM8BQ9Y5J9 83 aaPredicted RBP7.42□□□□□ -1.22
DDB1-217ENST00000540166 IGKV1D-43A0A0B4J1Z2 117 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 TRAV1-1A0A0B4J248 108 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 C17orf112F2Z3M2 114 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 HSPB6O14558 160 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 Q5PR19 223 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 C1QL2Q7Z5L3 287 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 ST8SIA1Q92185 356 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 ZNF524Q96C55 264 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 ABHD14BQ96IU4 210 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 C18orf12Q96KH6 178 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 SPRY4Q9C004 299 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 WDR61Q9GZS3 305 aaKnown RBP7.42□□□□□ -1.22
DDB1-217ENST00000540166 MRPL18Q9H0U6 180 aaKnown RBP7.42□□□□□ -1.22
DDB1-217ENST00000540166 ARL2-SNX15V9GYD0 113 aa7.42□□□□□ -1.22
DDB1-217ENST00000540166 MED13Q9UHV7 2174 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 CLEC18AA5D8T8 446 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 CBLN1P23435 193 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 SLC38A11Q08AI6 406 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 PCOLCEQ15113 449 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 CLEC18CQ8NCF0 446 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 ZNF721Q8TF20 911 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 WNT10AQ9GZT5 417 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 DOCK11Q5JSL3 2073 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 SPTBN5Q9NRC6 3674 aaKnown RBP7.41□□□□□ -1.22
DDB1-217ENST00000540166 MUC22E2RYF6 1773 aaPredicted RBP7.41□□□□□ -1.22
DDB1-217ENST00000540166 A0A1W2PN81 502 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 MS4A18H0YCH9 400 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 M0QZ24 198 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 RAB29O14966 203 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 CRYAAP02489 173 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 MGST1P10620 155 aaKnown RBP7.41□□□□□ -1.22
DDB1-217ENST00000540166 HOXC12P31275 282 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 RAC1P63000 192 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 MS4A18Q3C1V0 323 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 C1orf185Q5T7R7 199 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 FNDC7Q5VTL7 733 aa7.41□□□□□ -1.22
DDB1-217ENST00000540166 TCF23Q7RTU1 214 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms