RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CYYR1Q96J86 154 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 RSRP1Q9BUV0 290 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 PECRQ9BY49 303 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 RANGRFQ9HD47 186 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-211ENST00000539843 STUB1Q9UNE7 303 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 V9GY05 133 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 TENM3Q9P273 2699 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 FCN1O00602 326 aa11.82□□□□□ -0.52
UBE3B-211ENST00000539843 FABP7O15540 132 aa11.82□□□□□ -0.52
UBE3B-211ENST00000539843 SLC25A17O43808 307 aa11.82□□□□□ -0.52
UBE3B-211ENST00000539843 CD37P11049 281 aa11.82□□□□□ -0.52
UBE3B-211ENST00000539843 SPNP16150 400 aa11.82□□□□□ -0.52
UBE3B-211ENST00000539843 RPS25P62851 125 aaKnown RBP11.82□□□□□ -0.52
UBE3B-211ENST00000539843 IRF3Q14653 427 aa11.82□□□□□ -0.52
UBE3B-211ENST00000539843 TATDN3Q17R31 274 aa11.82□□□□□ -0.52
UBE3B-211ENST00000539843 RAB3CQ96E17 227 aa11.82□□□□□ -0.52
UBE3B-211ENST00000539843 PARP12Q9H0J9 701 aaKnown RBP11.82□□□□□ -0.52
UBE3B-211ENST00000539843 RAB22AQ9UL26 194 aa11.82□□□□□ -0.52
UBE3B-211ENST00000539843 BLOC1S6Q9UL45 172 aa11.82□□□□□ -0.52
UBE3B-211ENST00000539843 BET1O15155 118 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 DIRAS3O95661 229 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 IGKV1-16P04430 117 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 RRASP10301 218 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 AADACP22760 399 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 MYL9P24844 172 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 TALDO1P37837 337 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 ARL6IP1Q15041 203 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 C2orf76Q3KRA6 126 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 PRSS48Q7RTY5 328 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 SGPP2Q8IWX5 399 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 ZNF383Q8NA42 475 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 HARBI1Q96MB7 349 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 RCHY1Q96PM5 261 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 MGLLQ99685 303 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 GINS4Q9BRT9 223 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 OR2D2Q9H210 308 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 PALMDQ9NP74 551 aa11.81□□□□□ -0.52
UBE3B-211ENST00000539843 METTL21EPA6NDL7 271 aa11.8□□□□□ -0.52
UBE3B-211ENST00000539843 SHOXO15266 292 aa11.8□□□□□ -0.52
UBE3B-211ENST00000539843 CREBL2O60519 120 aaPredicted RBP11.8□□□□□ -0.52
UBE3B-211ENST00000539843 EGR2P11161 476 aaPredicted RBP11.8□□□□□ -0.52
UBE3B-211ENST00000539843 AQP4P55087 323 aa11.8□□□□□ -0.52
UBE3B-211ENST00000539843 CLDN12P56749 244 aa11.8□□□□□ -0.52
UBE3B-211ENST00000539843 SRSF7Q16629 238 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBE3B-211ENST00000539843 TMEM91Q6ZNR0 172 aa11.8□□□□□ -0.52
UBE3B-211ENST00000539843 ADTRPQ96IZ2 230 aa11.8□□□□□ -0.52
UBE3B-211ENST00000539843 RHOVQ96L33 236 aa11.8□□□□□ -0.52
UBE3B-211ENST00000539843 PHB2Q99623 299 aa11.8□□□□□ -0.52
UBE3B-211ENST00000539843 DUSP21Q9H596 190 aa11.8□□□□□ -0.52
UBE3B-211ENST00000539843 GAB2Q9UQC2 676 aa11.8□□□□□ -0.52
UBE3B-211ENST00000539843 DNAH9Q9NYC9 4486 aa11.8□□□□□ -0.52
UBE3B-211ENST00000539843 FOXI3A8MTJ6 420 aaPredicted RBP11.79□□□□□ -0.52
UBE3B-211ENST00000539843 FRMD6-AS1P0C7T7 363 aa11.79□□□□□ -0.52
UBE3B-211ENST00000539843 HSPA13P48723 471 aa11.79□□□□□ -0.52
UBE3B-211ENST00000539843 TMEM50BP56557 158 aa11.79□□□□□ -0.52
UBE3B-211ENST00000539843 ARFRP1Q13795 201 aa11.79□□□□□ -0.52
UBE3B-211ENST00000539843 VMA21Q3ZAQ7 101 aa11.79□□□□□ -0.52
UBE3B-211ENST00000539843 HES5Q5TA89 166 aa11.79□□□□□ -0.52
UBE3B-211ENST00000539843 OVCH2Q7RTZ1 564 aa11.79□□□□□ -0.52
UBE3B-211ENST00000539843 MUC7Q8TAX7 377 aa11.79□□□□□ -0.52
UBE3B-211ENST00000539843 TPSG1Q9NRR2 321 aa11.79□□□□□ -0.52
UBE3B-211ENST00000539843 NBEAL2Q6ZNJ1 2754 aa11.79□□□□□ -0.52
UBE3B-211ENST00000539843 A0A075B6Q4 140 aa11.78□□□□□ -0.52
UBE3B-211ENST00000539843 TMEM272A0A1B0GTI8 110 aa11.78□□□□□ -0.52
UBE3B-211ENST00000539843 H0Y980 276 aa11.78□□□□□ -0.52
UBE3B-211ENST00000539843 MPPED1O15442 326 aa11.78□□□□□ -0.52
UBE3B-211ENST00000539843 FCGR3AP08637 254 aa11.78□□□□□ -0.52
UBE3B-211ENST00000539843 FABP5Q01469 135 aa11.78□□□□□ -0.52
UBE3B-211ENST00000539843 PLAC9Q5JTB6 97 aa11.78□□□□□ -0.52
UBE3B-211ENST00000539843 ZNF367Q7RTV3 350 aa11.78□□□□□ -0.52
UBE3B-211ENST00000539843 SBSPONQ8IVN8 264 aa11.78□□□□□ -0.52
UBE3B-211ENST00000539843 OR5T1Q8NG75 326 aa11.78□□□□□ -0.52
UBE3B-211ENST00000539843 OR10R2Q8NGX6 335 aa11.78□□□□□ -0.52
UBE3B-211ENST00000539843 GFI1Q99684 422 aa11.78□□□□□ -0.52
UBE3B-211ENST00000539843 CABLES2Q9BTV7 478 aa11.78□□□□□ -0.52
UBE3B-211ENST00000539843 COA4Q9NYJ1 87 aa11.78□□□□□ -0.52
UBE3B-211ENST00000539843 A0A0B4J203 849 aa11.77□□□□□ -0.53
UBE3B-211ENST00000539843 ACTL6BO94805 426 aa11.77□□□□□ -0.53
UBE3B-211ENST00000539843 RAB6AP20340 208 aa11.77□□□□□ -0.53
UBE3B-211ENST00000539843 CRHBPP24387 322 aa11.77□□□□□ -0.53
UBE3B-211ENST00000539843 TBCEQ15813 527 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-211ENST00000539843 GTSCR1Q86UQ5 136 aa11.77□□□□□ -0.53
UBE3B-211ENST00000539843 USMG5Q96IX5 58 aa11.77□□□□□ -0.53
UBE3B-211ENST00000539843 SDHAF2Q9NX18 166 aa11.77□□□□□ -0.53
UBE3B-211ENST00000539843 COL7A1Q02388 2944 aa11.76□□□□□ -0.53
UBE3B-211ENST00000539843 SORL1Q92673 2214 aa11.76□□□□□ -0.53
UBE3B-211ENST00000539843 TRBV6-7A0A0A0MS04 114 aa11.76□□□□□ -0.53
UBE3B-211ENST00000539843 TRAV1-2A0A0B4J238 106 aa11.76□□□□□ -0.53
UBE3B-211ENST00000539843 IGKV1-6A0A0C4DH72 117 aa11.76□□□□□ -0.53
UBE3B-211ENST00000539843 ANKRD34BA5PLL1 514 aa11.76□□□□□ -0.53
UBE3B-211ENST00000539843 TRIM64CA6NLI5 447 aa11.76□□□□□ -0.53
UBE3B-211ENST00000539843 LDLRAD4O15165 306 aa11.76□□□□□ -0.53
UBE3B-211ENST00000539843 HIST1H1DP16402 221 aaKnown RBP11.76□□□□□ -0.53
UBE3B-211ENST00000539843 RPEL1Q2QD12 228 aa11.76□□□□□ -0.53
UBE3B-211ENST00000539843 TMEM177Q53S58 311 aa11.76□□□□□ -0.53
UBE3B-211ENST00000539843 IGSF11Q5DX21 431 aa11.76□□□□□ -0.53
UBE3B-211ENST00000539843 BVESQ8NE79 360 aa11.76□□□□□ -0.53
UBE3B-211ENST00000539843 OR9G4Q8NGQ1 327 aa11.76□□□□□ -0.53
UBE3B-211ENST00000539843 PEF1Q9UBV8 284 aaKnown RBP11.76□□□□□ -0.53
UBE3B-211ENST00000539843 IFITM5A6NNB3 132 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms