RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 PLA2G2CQ5R387 149 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 FAM78BQ5VT40 261 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 ACSM6Q6P461 480 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 OR5B12Q96R08 314 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 VAX2Q9UIW0 290 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 OR2W1Q9Y3N9 320 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 H0Y980 276 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 TNFSF15O95150 251 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 OPN1MWP04001 364 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 PFN1P07737 140 aaKnown RBP10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 OPN1MW2P0DN77 364 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 OPN1MW3P0DN78 364 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 GNG3P63215 75 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 SLC10A1Q14973 349 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 OR5D13Q8NGL4 314 aa10.58□□□□□ -0.72
SFSWAP-208ENST00000539506 TRBV6-6A0A0A6YYG2 114 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 DFFBO76075 338 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 TFF3Q07654 80 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 TMEM164Q5U3C3 297 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 FBXW9Q5XUX1 488 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 ZNF573Q86YE8 665 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 MCEMP1Q8IX19 187 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 CDH20Q9HBT6 801 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 ABI3Q9P2A4 366 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 MPC1Q9Y5U8 109 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 IGHV3-13P01766 116 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 IGHV3-7P01780 117 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 RND2P52198 227 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 BAXQ07812 192 aa10.57□□□□□ -0.72
SFSWAP-208ENST00000539506 RAMP3O60896 148 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 G6PCP35575 357 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 IMMP2LQ96T52 175 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 OR2J1Q9GZK6 312 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 ZNF320A2RRD8 509 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 OR5B21A6NL26 309 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 SPINK4O60575 86 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 CTXN2P0C2S0 81 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 THBS3P49746 956 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 MEF2BQ02080 365 aaPredicted RBP10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 SLC38A11Q08AI6 406 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 LTC4SQ16873 150 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 HES3Q5TGS1 186 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 SCCPDHQ8NBX0 429 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 NDUFAF3Q9BU61 184 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 SRD5A3Q9H8P0 318 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 PPIAL4AQ9Y536 164 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 TRBV24-1A0A075B6N3 115 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 DEGS1O15121 323 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 OR2H2O95918 312 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 MRPL37Q9BZE1 423 aaKnown RBP10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 NAT8Q9UHE5 227 aa10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 KLF13Q9Y2Y9 288 aaPredicted RBP10.56□□□□□ -0.72
SFSWAP-208ENST00000539506 B4DEV8 164 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 KLRC4-KLRK1H3BQV0 150 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 GYPAP02724 150 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 C1QTNF9P0C862 333 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 ERVK11-1P61568 191 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 SRSF6Q13247 344 aaKnown RBP10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 MRGPRGQ86SM5 289 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 LINC00596Q86U02 117 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 CXorf67Q86X51 503 aaPredicted RBP10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 SSUH2Q9Y2M2 353 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 TRAV38-1A0A0B4J264 116 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 CDIPTO14735 213 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 CEACAM1P13688 526 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 GCH1P30793 250 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 SPCS3P61009 180 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 NUTF2P61970 127 aaKnown RBP10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 TNFRSF9Q07011 255 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 ASPHD1Q5U4P2 390 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 GCNT2Q8N0V5 402 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 TPRX1Q8N7U7 411 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 SNIP1Q8TAD8 396 aaKnown RBP10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 TAF15Q92804 592 aaKnown RBP eCLIP10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 C2orf88Q9BSF0 95 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 PKIBQ9C010 78 aa10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 WDR61Q9GZS3 305 aaKnown RBP10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 RIMS4Q9H426 269 aaPredicted RBP10.55□□□□□ -0.72
SFSWAP-208ENST00000539506 DUXBA0A1W2PPF3 345 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 SMPD2O60906 423 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 FRMD6-AS1P0C7T7 363 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 RAC2P15153 192 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 NPPCP23582 126 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 PNRC1Q12796 327 aaPredicted RBP10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 ZNF585BQ52M93 769 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 ZNF114Q8NC26 417 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 OR10G4Q8NGN3 311 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 OR10G9Q8NGN4 311 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 OR10G7Q8NGN6 311 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 TRAPPC2LQ9UL33 140 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 TRGV5A0A0B4J1U4 118 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 J3QT63 122 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 DVL1O14640 695 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 IGHV1-2P23083 117 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 LRRC75BQ2VPJ9 315 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 TMEM41BQ5BJD5 291 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 FFAR4Q5NUL3 377 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 ZNF497Q6ZNH5 498 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms