RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 LHFPL6Q9Y693 200 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 SPCS1Q9Y6A9 102 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 ATG2AQ2TAZ0 1938 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 A0A0G2JLM5 398 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 C2orf70A6NJV1 201 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 DXOO77932 396 aaKnown RBP7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 HIST1H1EP10412 219 aaKnown RBP7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 FCGR2AP12318 317 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 PGCP20142 388 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 OTX2P32243 289 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 ARL16Q0P5N6 197 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 MLF2Q15773 248 aaPredicted RBP7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 TMEM177Q53S58 311 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 ACSM6Q6P461 480 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 RD3Q7Z3Z2 195 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 LMX1AQ8TE12 382 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 ZC2HC1AQ96GY0 325 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 DUSP23Q9BVJ7 150 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 HES4Q9HCC6 221 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 TRAPPC2LQ9UL33 140 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 TRPM6Q9BX84 2022 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 A0A087X0K7 114 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 H3BMH7 237 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 BMPR1BO00238 502 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 SLC17A3O00476 420 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 CRXO43186 299 aaPredicted RBP7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 CLDN1O95832 211 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 CCL1P22362 96 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 SLC38A11Q08AI6 406 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 FAM162BQ5T6X4 162 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 BPIFA4PQ86YQ2 179 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 BCORP1Q8N888 145 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 PERPQ96FX8 193 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 IL21Q9HBE4 155 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 SCRT2Q9NQ03 307 aa7.23□□□□□ -1.25
SRGAP1-202ENST00000537556 FOXS1O43638 330 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 APCSP02743 223 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 AMY1AP04745 511 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 LIPFP07098 398 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 PTGDSP41222 190 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 PMP22Q01453 160 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 TMEM249Q2WGJ8 235 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 CEACAM21Q3KPI0 293 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 OR8B12Q8NGG6 310 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 C10orf35Q96D05 121 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 JPT1Q9UK76 154 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 HEBP2Q9Y5Z4 205 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 LY96Q9Y6Y9 160 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 H0Y980 276 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 HNRNPA1P09651 372 aaKnown RBP eCLIP7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 FABP2P12104 132 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 FBLP22087 321 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 ATP5G3P48201 142 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 GNG4P50150 75 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 HERV-K104P63124 156 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 TNXAQ16473 311 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 BRICD5Q6PL45 260 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 FOXI2Q6ZQN5 318 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 ZNF295-AS1Q8N0V1 137 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 OR1F12Q8NHA8 337 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 COX14Q96I36 57 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 PNRC2Q9NPJ4 139 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 CEP350Q5VT06 3117 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 PCNX3Q9H6A9 2034 aa7.22□□□□□ -1.25
SRGAP1-202ENST00000537556 TRBV20OR9-2A0A075B6H5 130 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 TRBV7-9A0A0J9YWB2 115 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 SPAARA0A1B0GVQ0 90 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 ISLRO14498 428 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 ANGPTL7O43827 346 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 IAPPP10997 89 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 OR1D4P47884 311 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 FKBP1BP68106 108 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 NNATQ16517 81 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 ZNF841Q6ZN19 808 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 Q6ZSR6 202 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 SPATA12Q7Z6I5 190 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 TMEM52Q8NDY8 209 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 PP6455Q8WZ26 134 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 WDR54Q9H977 334 aa7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 BOKQ9UMX3 212 aaPredicted RBP7.21□□□□□ -1.25
SRGAP1-202ENST00000537556 A0A1W2PPM0 123 aa7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 CD300LBA8K4G0 201 aa7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 LAMTOR5O43504 91 aa7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 DAP3P51398 398 aaKnown RBP7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 ZNF121P58317 390 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 SSBP2P81877 361 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 MEF2CQ06413 473 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 ODF1Q14990 250 aa7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 SPANXN5Q5MJ07 72 aa7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 GAPTQ8N292 157 aa7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 TM4SF19Q96DZ7 209 aa7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 C5orf30Q96GV9 206 aa7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 TMEM204Q9BSN7 226 aa7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 Q9Y3F1 56 aa7.21□□□□□ -1.26
SRGAP1-202ENST00000537556 ZNF816-ZNF321PA0A0X1KG74 233 aa7.2□□□□□ -1.26
SRGAP1-202ENST00000537556 FRMD6-AS1P0C7T7 363 aa7.2□□□□□ -1.26
SRGAP1-202ENST00000537556 TCEA2Q15560 299 aa7.2□□□□□ -1.26
SRGAP1-202ENST00000537556 FNDC7Q5VTL7 733 aa7.2□□□□□ -1.26
SRGAP1-202ENST00000537556 ADAMTSL4Q6UY14 1074 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms