RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 NUDCD2Q8WVJ2 157 aa13.45□□□□□ -0.26
SFSWAP-205ENST00000537164 C5orf30Q96GV9 206 aa13.45□□□□□ -0.26
SFSWAP-205ENST00000537164 GINS4Q9BRT9 223 aa13.45□□□□□ -0.26
SFSWAP-205ENST00000537164 FBXL15Q9H469 300 aa13.45□□□□□ -0.26
SFSWAP-205ENST00000537164 M0R1X1 148 aa13.44□□□□□ -0.26
SFSWAP-205ENST00000537164 APOA2P02652 100 aa13.44□□□□□ -0.26
SFSWAP-205ENST00000537164 IGLL1P15814 213 aa13.44□□□□□ -0.26
SFSWAP-205ENST00000537164 CX3CL1P78423 397 aa13.44□□□□□ -0.26
SFSWAP-205ENST00000537164 NDPQ00604 133 aa13.44□□□□□ -0.26
SFSWAP-205ENST00000537164 PSG5Q15238 335 aa13.44□□□□□ -0.26
SFSWAP-205ENST00000537164 CNIH2Q6PI25 160 aa13.44□□□□□ -0.26
SFSWAP-205ENST00000537164 TSNAXQ99598 290 aaKnown RBP13.44□□□□□ -0.26
SFSWAP-205ENST00000537164 ST6GALNAC5Q9BVH7 336 aa13.44□□□□□ -0.26
SFSWAP-205ENST00000537164 TRAV41A0A0B4J266 112 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 G3V318 75 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 FCN1O00602 326 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 EGR2P11161 476 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 TGFBR1P36897 503 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 RPS19P39019 145 aaKnown RBP13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 GNG2P59768 71 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 KIAA0141Q14154 515 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 ZNF562Q6V9R5 426 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 LCNL1Q6ZST4 164 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 TCTEX1D1Q8N7M0 179 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 DDB2Q92466 427 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 FLYWCH2Q96CP2 140 aaKnown RBP13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 PARP11Q9NR21 331 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 SLC35D1Q9NTN3 355 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 ANXA10Q9UJ72 324 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 FBXO7Q9Y3I1 522 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 OR2W1Q9Y3N9 320 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 NUBP2Q9Y5Y2 271 aa13.43□□□□□ -0.26
SFSWAP-205ENST00000537164 NUDT19A8MXV4 375 aa13.42□□□□□ -0.26
SFSWAP-205ENST00000537164 IGLV2-23P01705 113 aa13.42□□□□□ -0.26
SFSWAP-205ENST00000537164 HLA-DQB1P01920 261 aa13.42□□□□□ -0.26
SFSWAP-205ENST00000537164 LGALS7P47929 136 aa13.42□□□□□ -0.26
SFSWAP-205ENST00000537164 RPS16P62249 146 aaKnown RBP13.42□□□□□ -0.26
SFSWAP-205ENST00000537164 TMEM177Q53S58 311 aa13.42□□□□□ -0.26
SFSWAP-205ENST00000537164 C4orf3Q8WVX3 66 aa13.42□□□□□ -0.26
SFSWAP-205ENST00000537164 RAX2Q96IS3 184 aa13.42□□□□□ -0.26
SFSWAP-205ENST00000537164 ADTRPQ96IZ2 230 aa13.42□□□□□ -0.26
SFSWAP-205ENST00000537164 UBE2E2Q96LR5 201 aa13.42□□□□□ -0.26
SFSWAP-205ENST00000537164 DIABLOQ9NR28 239 aa13.42□□□□□ -0.26
SFSWAP-205ENST00000537164 NECAP2Q9NVZ3 263 aa13.42□□□□□ -0.26
SFSWAP-205ENST00000537164 METTL1Q9UBP6 276 aaKnown RBP13.42□□□□□ -0.26
SFSWAP-205ENST00000537164 WSB1Q9Y6I7 421 aa13.42□□□□□ -0.26
SFSWAP-205ENST00000537164 TRAV18A0A075B6X5 111 aa13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 CCL24O00175 119 aa13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 TUSC2O75896 110 aa13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 SLC22A5O76082 557 aa13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 CRYGBP07316 175 aa13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 RRASP10301 218 aa13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 DUTP33316 252 aaKnown RBP13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 RUNX1Q01196 453 aa13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 PLGLAQ15195 96 aa13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 AKIRIN2Q53H80 203 aa13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 FOXB2Q5VYV0 432 aa13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 ZNF491Q8N8L2 437 aa13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 KLK15Q9H2R5 256 aa13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 AUNIPQ9H7T9 357 aa13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 RBM7Q9Y580 266 aaKnown RBP13.41□□□□□ -0.26
SFSWAP-205ENST00000537164 LINC00473A8K010 186 aa13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 XRCC3O43542 346 aa13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 SOX15O60248 233 aa13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 LUMP51884 338 aaPredicted RBP13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 EGFEM1PQ0D2K5 195 aa13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 TMEM267Q0VDI3 215 aaPredicted RBP13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 FHL3Q13643 280 aa13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 PPP1R27Q86WC6 154 aa13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 HOGA1Q86XE5 327 aa13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 ZNF645Q8N7E2 425 aa13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 OR13F1Q8NGS4 319 aa13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 SLC25A46Q96AG3 418 aa13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 MCRIP2Q9BUT9 160 aaKnown RBP13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 FUNDC2Q9BWH2 189 aa13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 GPR61Q9BZJ8 451 aa13.4□□□□□ -0.26
SFSWAP-205ENST00000537164 I3L521 148 aa13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 SLC25A17O43808 307 aa13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 CA2P00918 260 aa13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 IGLV2-14P01704 120 aa13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 NFYAP23511 347 aaPredicted RBP13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 RAB9AP51151 201 aa13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 LSM3P62310 102 aaKnown RBP13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 SSBP2P81877 361 aaPredicted RBP13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 RTL8BQ17RB0 113 aa13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 UBE2NLQ5JXB2 153 aa13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 TMEM65Q6PI78 240 aa13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 BEST4Q8NFU0 473 aa13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 KCTD12Q96CX2 325 aaKnown RBP13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 S100A16Q96FQ6 103 aaKnown RBP13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 TPSG1Q9NRR2 321 aa13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 FOXA2Q9Y261 457 aaPredicted RBP13.39□□□□□ -0.27
SFSWAP-205ENST00000537164 TNCP24821 2201 aa13.38□□□□□ -0.27
SFSWAP-205ENST00000537164 SRRM4A7MD48 611 aaKnown RBP13.38□□□□□ -0.27
SFSWAP-205ENST00000537164 CBX3Q13185 183 aa13.38□□□□□ -0.27
SFSWAP-205ENST00000537164 PYHIN1Q6K0P9 492 aa13.38□□□□□ -0.27
SFSWAP-205ENST00000537164 OVCH2Q7RTZ1 564 aa13.38□□□□□ -0.27
SFSWAP-205ENST00000537164 GVQW1Q8N7I0 195 aa13.38□□□□□ -0.27
SFSWAP-205ENST00000537164 BVESQ8NE79 360 aa13.38□□□□□ -0.27
SFSWAP-205ENST00000537164 OR5M8Q8NGP6 311 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms