RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 NPIPB7O75200 414 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 HLA-DQA1P01909 254 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 SMIM17P0DL12 118 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 CCL2P13500 99 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 PPP1CAP62136 330 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 C16orf47Q6ZP98 133 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-213ENST00000537002 RNF166Q96A37 237 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-213ENST00000537002 VSTM2LQ96N03 204 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 FOXB1Q99853 325 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 PEF1Q9UBV8 284 aaKnown RBP4.65□□□□□ -1.67
PTPRD-213ENST00000537002 IGLV1-36A0A0B4J1U3 117 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 ZP4Q12836 540 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 LRRC10Q5BKY1 277 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 RFESDQ8TAC1 157 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 C18orf12Q96KH6 178 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 HSD17B10Q99714 261 aaKnown RBP4.65□□□□□ -1.67
PTPRD-213ENST00000537002 G6PC2Q9NQR9 355 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 POLDIP2Q9Y2S7 368 aa4.65□□□□□ -1.67
PTPRD-213ENST00000537002 NUP210LQ5VU65 1888 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 DXOO77932 396 aaKnown RBP4.64□□□□□ -1.67
PTPRD-213ENST00000537002 OR1C1Q15619 314 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 CEACAM16Q2WEN9 425 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 Q6ZS49 121 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 IL36RNQ9UBH0 155 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 HELZP42694 1942 aaKnown RBP4.64□□□□□ -1.67
PTPRD-213ENST00000537002 CXorf1O96002 111 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 IGHEP01854 428 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 CAPZBP47756 277 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 TCF24Q7RTU0 167 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 ZNF703Q9H7S9 590 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-213ENST00000537002 SERF1AO75920 110 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 SUB1P53999 127 aaKnown RBP eCLIP4.64□□□□□ -1.67
PTPRD-213ENST00000537002 MMDQ15546 238 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 OR10J3Q5JRS4 329 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 MMD2Q8IY49 270 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 ST20Q9HBF5 79 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 DPRXA6NFQ7 191 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 NGFP01138 241 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 CLDN18P56856 261 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 ZNF718Q3SXZ3 478 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 ABHD17BQ5VST6 288 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 OR5A2Q8NGI9 324 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 GPR146Q96CH1 333 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 COMMD5Q9GZQ3 224 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 CSTL1Q9H114 145 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 SH2D2AQ9NP31 389 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 SERGEFQ9UGK8 458 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 F11RQ9Y624 299 aaKnown RBP4.64□□□□□ -1.67
PTPRD-213ENST00000537002 PXMP4Q9Y6I8 212 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 SLC22A20A6NK97 555 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 TMEM238C9JI98 176 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 SMPD2O60906 423 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 TNFRSF4P43489 277 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 ID3Q02535 119 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 MZT1Q08AG7 82 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 OCIAD2Q56VL3 154 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 SCCPDHQ8NBX0 429 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 DUSP13Q9UII6 198 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 TMEM30CPA0ZSE6 113 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 PRSS1P07477 247 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 SMIM10L1P0DMW3 83 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 PEBP1P30086 187 aaKnown RBP4.64□□□□□ -1.67
PTPRD-213ENST00000537002 CSN1S1P47710 185 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 FAM71F2Q6NXP2 309 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 RASL11AQ6T310 242 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 TM4SF19Q96DZ7 209 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 SMIM10Q96HG1 83 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 ADTRPQ96IZ2 230 aa4.64□□□□□ -1.67
PTPRD-213ENST00000537002 ZNF430Q9H8G1 570 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-213ENST00000537002 C2CD4DB7Z1M9 353 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 IGHV3-13P01766 116 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 IGHV3-7P01780 117 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 ADMP35318 185 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 RPL13AP40429 203 aaKnown RBP4.63□□□□□ -1.67
PTPRD-213ENST00000537002 MFAP2P55001 183 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 VASH2Q86V25 355 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 ZNF519Q8TB69 540 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 RAB1CQ92928 201 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 SFRP2Q96HF1 295 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 DIRC2Q96SL1 478 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 TMEM167BQ9NRX6 74 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 VSTM5A8MXK1 200 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 MPDU1O75352 247 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 S1PR2O95136 353 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 ZNF32P17041 273 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 RHOGP84095 191 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 RTL8BQ17RB0 113 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 PLPPR1Q8TBJ4 325 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 TAF15Q92804 592 aaKnown RBP eCLIP4.63□□□□□ -1.67
PTPRD-213ENST00000537002 KCNS1Q96KK3 526 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 OR8B2Q96RD0 313 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 MEGF9Q9H1U4 602 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 SPTBP11277 2137 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 ALG1L2C9J202 215 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 P01737 135 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 SP1P08047 785 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 SELEP16581 610 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 RELBQ01201 579 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 IZUMO4Q1ZYL8 232 aa4.63□□□□□ -1.67
PTPRD-213ENST00000537002 H1FXQ92522 213 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms