RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 A0A087WXM4 84 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 A0A1B0GW64 132 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 E7EUB6 86 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 H3BUI4 141 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 I3L521 148 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 K7EIL1 84 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 M0R1X1 148 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 HSPA12AO43301 675 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 SLC25A17O43808 307 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 AIREO43918 545 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 TUSC2O75896 110 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 RGS11O94810 467 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 TNFAIP8O95379 198 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 HLA-DQB1P01920 261 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 TFAP2AP05549 437 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 EIF4EP06730 217 aaKnown RBP3.93□□□□□ -1.78
USH1C-210ENST00000534556 GSTP1P09211 210 aaKnown RBP3.93□□□□□ -1.78
USH1C-210ENST00000534556 MYOD1P15172 320 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 DTYMKP23919 212 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 HOXD3P31249 432 aaPredicted RBP3.93□□□□□ -1.78
USH1C-210ENST00000534556 DUTP33316 252 aaKnown RBP3.93□□□□□ -1.78
USH1C-210ENST00000534556 ALDH3B2P48448 385 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 DEFA5Q01523 94 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 CTF1Q16619 201 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 SRSF7Q16629 238 aaKnown RBP eCLIP3.93□□□□□ -1.78
USH1C-210ENST00000534556 PNLIPRP3Q17RR3 467 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 TMEM177Q53S58 311 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 KHDC1LQ5JSQ8 128 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 ZNF660Q6AZW8 331 aaPredicted RBP3.93□□□□□ -1.78
USH1C-210ENST00000534556 C19orf35Q6ZS72 473 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 ZNF491Q8N8L2 437 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 MINDY2Q8NBR6 621 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 BVESQ8NE79 360 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 KLHL30-AS1Q8NEE0 82 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 OR4F17Q8NGA8 305 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 CHPT1Q8WUD6 406 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 OR4F4Q96R69 305 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 CLCC1Q96S66 551 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 RASL11BQ9BPW5 248 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 ST6GALNAC5Q9BVH7 336 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 RAB9BQ9NP90 201 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 PARP11Q9NR21 331 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 ZNF580Q9UK33 172 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 ANAPC10Q9UM13 185 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 WASHC3Q9Y3C0 194 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 STARD9Q9P2P6 4700 aa3.93□□□□□ -1.78
USH1C-210ENST00000534556 TRAV41A0A0B4J266 112 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 METTL21EPA6NDL7 271 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 OR5H14A6NHG9 310 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 CGB1A6NKQ9 187 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 H7C2Y5 167 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 CA2P00918 260 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 PF4V1P10720 104 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 AADACP22760 399 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 CDX1P47902 265 aaPredicted RBP3.92□□□□□ -1.78
USH1C-210ENST00000534556 TAGLNQ01995 201 aaKnown RBP3.92□□□□□ -1.78
USH1C-210ENST00000534556 FOXE3Q13461 319 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 FHL3Q13643 280 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 OR2B11Q5JQS5 317 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 C10orf55Q5SWW7 151 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 LIN54Q6MZP7 749 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 TEX38Q6PEX7 206 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 IDO2Q6ZQW0 420 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 HOGA1Q86XE5 327 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 LYSMD2Q8IV50 215 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 ZNF695Q8IW36 515 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 FOXRED2Q8IWF2 684 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.92□□□□□ -1.78
USH1C-210ENST00000534556 LFNGQ8NES3 379 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 OR4X2Q8NGF9 303 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 OR8H1Q8NGG4 311 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 OR10J5Q8NHC4 309 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 SLC25A46Q96AG3 418 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 OR5B12Q96R08 314 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 MIXL1Q9H2W2 232 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 CCL28Q9NRJ3 127 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 SLC35D1Q9NTN3 355 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 METTL1Q9UBP6 276 aaKnown RBP3.92□□□□□ -1.78
USH1C-210ENST00000534556 SCOCQ9UIL1 159 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 ANXA10Q9UJ72 324 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 ZNF221Q9UK13 617 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 ADAM30Q9UKF2 790 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 MGAT4AQ9UM21 535 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 OR2W1Q9Y3N9 320 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 ETV7Q9Y603 341 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 A3GALT2U3KPV4 340 aa3.92□□□□□ -1.78
USH1C-210ENST00000534556 IGHV4OR15-8A0A075B7B6 117 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 A0A087WW49 117 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 TRAV3A0A0B4J244 114 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 A0A1W2PN81 502 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 CCL24O00175 119 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 XRCC3O43542 346 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 HPGDSO60760 199 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 RAMP3O60896 148 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 GABARAPO95166 117 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 DIRAS3O95661 229 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 CRYZL1O95825 349 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 ELANEP08246 267 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 APELAP0DMC3 54 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 NAT1P18440 290 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms